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HOLMESv2: A CRISPR-Cas12b-Assisted Platform for Nucleic Acid Detection and DNA Methylation Quantitation

Open access
Li, Linxian, Li, Shiyuan, Wu, Na, Wu, Jiacheng, Wang, Gang, Zhao, Guoping, Wang, Jin·2019·ACS Synthetic Biology

Abstract

-cleavage activity against collateral single-stranded DNA (ssDNA) and employed the activity to develop a rapid nucleic acid detection system, namely HOLMES (one-hour low-cost multipurpose highly efficient system). Here, with the employment of thermophilic CRISPR-Cas12b, we create HOLMESv2 for four different applications: (1) specifically discriminating single nucleotide polymorphism (SNP); (2) simply detecting virus RNA, human cell mRNA and circular RNA; (3) conveniently quantitating target nucleic acids with a one-step system combined with LAMP amplification in a constant temperature, thus avoiding cross-contamination; (4) accurately quantitating target DNA methylation degree with the combination of Cas12b detection and bisulfite treatment. These results highlight the potential of HOLMESv2 as a promising platform for both molecular diagnostics and epigenetics applications.

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Metadata

Authors
Li, L., Li, S., Wu, N., Wu, J., Wang, G., Zhao, G., & Wang, J.
Venue
ACS Synthetic Biology
Published
2019-09-18
Volume
8
Issue
10
Pages
2228-2237
ISSN
2161-5063 (ISSN-L)
OpenAlex
W2974267223
Cited by
793
References
2
FWCI
17.76
Type
journal article
Language
en
Open access
green

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