Cited by 154

The DOI matches its Crossref record; 6 of the 6 references it cites were found in a registry or an index.

Structure of the Human Autophagy Initiating Kinase ULK1 in Complex with Potent Inhibitors

Lazarus, Michael B., Novotny, Chris J., Shokat, Kevan M.·2015·ACS Chemical Biology

Abstract

Autophagy is a conserved cellular process that involves the degradation of cellular components for energy maintenance and cytoplasmic quality control that has recently gained interest as a novel target for a variety of human diseases, including cancer. A prime candidate to determine the potential therapeutic benefit of targeting autophagy is the kinase ULK1, whose activation initiates autophagy. Here, we report the first structures of ULK1, in complex with multiple potent inhibitors. These structures show features unique to the enzyme and will provide a path for the rational design of selective compounds as cellular probes and potential therapeutics.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1021/cb500835z

Cites

6 of 6 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 21

  1. Mizushima, 2011, The role of Atg proteins in autophagosome formation, Annu. Rev. Cell Dev. Biol., 27, 107, 10.1146/annurev-cellbio-092910-154005 · DOI · Paper page
  2. Tsukada, 1993, Isolation and characterization of autophagy-defective mutants of Saccharomyces cerevisiae, FEBS Lett., 333, 169, 10.1016/0014-5793(93)80398-E · DOI
  3. Harding, 1995, Isolation and characterization of yeast mutants in the cytoplasm to vacuole protein targeting pathway, J. Cell Biol., 131, 591, 10.1083/jcb.131.3.591 · DOI
  4. Thumm, 1994, Isolation of autophagocytosis mutants of Saccharomyces cerevisiae, FEBS Lett., 349, 275, 10.1016/0014-5793(94)00672-5 · DOI
  5. Chan, 2007, siRNA screening of the kinome identifies ULK1 as a multidomain modulator of autophagy, J. Biol. Chem., 282, 25464, 10.1074/jbc.M703663200 · DOI · Paper page
  6. Wong, 2013, The ULK1 complex: sensing nutrient signals for autophagy activation, Autophagy, 9, 124, 10.4161/auto.23323 · DOI
  7. Stjepanovic, 2014, Assembly and dynamics of the autophagy-initiating Atg1 complex, Proc. Natl. Acad. Sci. U. S. A., 111, 12793, 10.1073/pnas.1407214111 · DOI
  8. Egan, 2011, Phosphorylation of ULK1 (hATG1) by AMP-activated protein kinase connects energy sensing to mitophagy, Science, 331, 456, 10.1126/science.1196371 · DOI · Paper page
  9. Ganley, 2009, ULK1.ATG13.FIP200 complex mediates mTOR signaling and is essential for autophagy, J. Biol. Chem., 284, 12297, 10.1074/jbc.M900573200 · DOI · Paper page
  10. Spencer, 2009, Beclin 1 gene transfer activates autophagy and ameliorates the neurodegenerative pathology in alpha-synuclein models of Parkinson’s and Lewy body diseases, J. Neurosci., 29, 13578, 10.1523/JNEUROSCI.4390-09.2009 · DOI · Paper page
  11. Karantza-Wadsworth, 2007, Role of autophagy in breast cancer, Autophagy, 3, 610, 10.4161/auto.4867 · DOI
  12. Boya, 2005, Inhibition of macroautophagy triggers apoptosis, Mol. Cell. Biol., 25, 1025, 10.1128/MCB.25.3.1025-1040.2005 · DOI
  13. Fan, 2010, Akt and autophagy cooperate to promote survival of drug-resistant glioma, Sci. Signaling, 3, ra81, 10.1126/scisignal.2001017 · DOI
  14. Kanzawa, 2004, Role of autophagy in Temozolomide-induced cytotoxicity for malignant glioma cells, Cell Death Differ., 11, 448, 10.1038/sj.cdd.4401359 · DOI
  15. Paglin, 2001, A novel response of cancer cells to radiation involves autophagy and formation of acidic vesicles, Cancer Res., 61, 439
  16. Niesen, 2007, The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability, Nat. Protoc., 2, 2212, 10.1038/nprot.2007.321 · DOI
  17. Goldschmidt, 2007, Toward rational protein crystallization: A Web server for the design of crystallizable protein variants, Protein Sci., 16, 1569, 10.1110/ps.072914007 · DOI
  18. Fujioka, 2014, Structural basis of starvation-induced assembly of the autophagy initiation complex, Nat. Struct. Mol. Biol., 21, 513, 10.1038/nsmb.2822 · DOI
  19. Lin, 2012, GSK3-TIP60-ULK1 signaling pathway links growth factor deprivation to autophagy, Science, 336, 477, 10.1126/science.1217032 · DOI · Paper page
  20. Pike, 2008, Activation segment dimerization: a mechanism for kinase autophosphorylation of non-consensus sites, EMBO J., 27, 704, 10.1038/emboj.2008.8 · DOI
  21. Krissinel, 2007, Inference of macromolecular assemblies from crystalline state, J. Mol. Biol., 372, 774, 10.1016/j.jmb.2007.05.022 · DOI

Cited by

Sorted by citations

Metadata

Authors
Lazarus, M. B., Novotny, C. J., & Shokat, K. M.
Affiliations
University of California, San Francisco , , , ,
Venue
ACS Chemical Biology
Published
2014-12-31
Volume
10
Issue
1
Pages
257-261
ISSN
  • 1554-8929
  • 1554-8937
Cited by
154
References
6
Language
en
Funders
  • Howard Hughes Medical Institute (NA)
  • National Institute of Allergy and Infectious Diseases (R01 AI094098)
  • Helen Hay Whitney Foundation (NA)

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review