Prokaryotic Nucleotide Excision Repair: The UvrABC System

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Items 201–300 of 335

1. Recognition and Removal of Bulky DNA Lesions by the Nucleotide Excision Repair System
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2. Cyanobacteria Under UV Radiation: General Insights into Stress Responses
   Zofia Mazur, Ireneusz Ślesak · 2025 · International Journal of Molecular Sciences
3. Novel Sequence Features of DNA Repair Genes/Proteins from Deinococcus Species Implicated in Protection from Oxidatively Generated Damage
   F. Hassan, Radhey S. Gupta · 2018 · Genes
4. Mechanical morphotype switching as an adaptive response in mycobacteria
   Haig Alexander Eskandarian, Yuxiang Chen, Chiara Toniolo, Juan M. Belardinelli, Zuzana Palčeková, L.G. Hom, Paul D. Ashby, Georg Ernest Fantner, Mary Jackson, John D. McKinney et al. · 2024 · Science Advances
5. DNA Repair Repertoire of the Enigmatic Hydra
   Apurva Barve, Alisha A. Galande, Saroj Ghaskadbi, Surendra Ghaskadbi · 2021 · Frontiers in Genetics
6. Structural Basis for the Interactions of the Colibactin Resistance Gene Product ClbS with DNA
   Prabhanshu Tripathi, Steven D. Bruner · 2021 · Biochemistry
7. Analysis of LexA binding sites and transcriptomics in response to genotoxic stress inLeptospira interrogans
   Luciane Schons Fonseca, Josefa Bezerra da Silva, Juliana S. Milanez, Renan H. Domingos, Janet L. Smith, Helder Imoto Nakaya, Alan D. Grossman, Paulo Lee Ho, Renata MA da Costa · 2016 · Nucleic Acids Research
8. The mechanisms underlying antigenic variation and maintenance of genomic integrity in Mycoplasma pneumoniae and Mycoplasma genitalium
   Mohamad Saifudin Hakim, Luthvia Annisa, Rizka Oktarianti Ainun Jariah, Cornelis Vink · 2020 · Archives of Microbiology
9. 55.1, a gene of unknown function of phage T4, impacts on Escherichia coli folate metabolism and blocks DNA repair by the NER
   Yves Mattenberger, Shawn Mattson, Johann Métrailler, Filo Silva, Dominique Belin · 2011 · Molecular Microbiology
10. Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams
    Shigeru Shimamura, Takashi Kaneko, Genki Ozawa, Mamiko Nishino Matsumoto, Takeru Koshiishi, Yoshihiro Takaki, Chiaki Kato, Ken Takai, Takao Yoshida, Katsunori Fujikura et al. · 2017 · PLoS ONE
11. Complete genome sequence of Microvirga sp. 17mud 1–3, a radiation-resistant bacterium
    Gayathri Sathiyaraj, Myung Kyum Kim, Ju‐Young Kim, Su-Jeong Kim, Jun Hwee Jang, Soohyun Maeng, Myung-Suk Kang, Sathiyaraj Srinivasan · 2018 · Molecular & Cellular Toxicology
12. Genomic survey and expression analysis of DNA repair genes in the genus Leptospira
    Marinalva Martins-Pinheiro, Luciane Schons Fonseca, Josefa Bezerra da Silva, Renan H. Domingos, Leonardo Hiroyuki Santos Momo, Ana Carolina Quirino Simões, Paulo Lee Ho, Renata M. A. da Costa · 2015 · Molecular Genetics and Genomics
13. Real-time investigation of the roles of ATP hydrolysis by UvrA and UvrB during DNA damage recognition in nucleotide excision repair
    Thanyalak Kraithong, Jeerus Sucharitakul, Chittanon Buranachai, David Jeruzalmi, Pimchai Chaiyen, Danaya Pakotiprapha · 2020 · DNA repair
14. Deciphering the essentiality and function of SxSx motif in Mycobacterium tuberculosis UvrB
    Manoj Thakur, Kalappa Muniyappa · 2020 · Biochimie
15. Damage recognition by UV damage endonuclease from Schizosaccharomyces pombe
    Keti Paspaleva, Geri F. Moolenaar, Nora Goosen · 2009 · DNA repair
16. Functional characterization of UvrD helicases from Haemophilus influenzae and Helicobacter pylori
    Ruchika Sharma, Desirazu Narasimha Rao · 2012 · FEBS Journal
17. The repertoire of ABC proteins in Clostridioides difficile
    Methinee Pipatthana, Phurt Harnvoravongchai, Pisut Pongchaikul, Somsak Likhitrattanapisal, Matthew Phanchana, Surang Chankhamhaengdecha, Tavan Janvilisri · 2021 · Computational and Structural Biotechnology Journal
18. Beyond Xeroderma Pigmentosum: DNA Damage and Repair in an Ecological Context. A Tribute to James E. Cleaver
    Deneb Karentz · 2014 · Photochemistry and Photobiology
19. Movement of the β-hairpin in the third zinc-binding module of UvrA is required for DNA damage recognition
    Thanyalak Kraithong, Ketsaraphorn Channgam, Ornchuma Itsathitphaisarn, Montip Tiensuwan, David Jeruzalmi, Danaya Pakotiprapha · 2017 · DNA repair
20. The synthesis of a menthol derivative of 2-aminopurine as a fluorescent DNA lesion
    Wouter F. J. Hogendorf, Carlo P. Verhagen, Erik Malta, Nora Goosen, Herman S. Overkleeft, Dmitri V. Filippov, Gijsbert A. van der Marel · 2009 · Tetrahedron
21. BmNPV Orf 65 (Bm65) Is Identified as an Endonuclease Directly Facilitating UV-Induced DNA Damage Repair
    Qi Tang, Yutong Liu, Jingjing Tang, Fangying Chen, Xinyu Qi, Feifei Zhu, Qian Yu, Huiqing Chen, Peng Wu, Liang Chen et al. · 2022 · Journal of Virology
22. Mechanistic understanding of UvrA damage detection and lesion hand-off to UvrB in Nucleotide Excision Repair
    Marianna Genta, Giulia Ferrara, Riccardo Capelli, Diego Rondelli, Sarah Sertic, Martino Bolognesi, Menico Rizzi, Franca Rossi, David Jeruzalmi, Antonio Chaves-Sanjuán et al. · 2025 · Nature Communications
23. PcrA Dissociates RecA Filaments and the SsbA and RecO Mediators Counterbalance Such Activity
    Begoña Carrasco, María Moreno‐del Álamo, Rubén Torres, Juan C. Alonso · 2022 · Frontiers in Molecular Biosciences
24. Insight in lag phase of Listeria monocytogenes during enrichment through proteomic and transcriptomic responses
    Jasper W. Bannenberg, Sjef A. Boeren, Marcel H. Zwietering, Tjakko Abee, Heidy M.W. den Besten · 2023 · Food Research International
25. Prioritizing the repair of DNA damage that is encountered by RNA polymerase
    Nigel J. Savery · 2011 · Transcription
26. Protective Role of the PG1036-PG1037-PG1038 Operon in Oxidative Stress in Porphyromonas gingivalis W83
    Leroy G. Henry, Wilson Aruni, Lawrence B. Sandberg, Hansel M. Fletcher · 2013 · PLoS ONE
27. Effects of Spatial Structure and Reduced Growth Rates on Evolution in Bacterial Populations
    Michael France, Benjamin J. Ridenhour, Larry J. Forney · 2018 · Grand challenges in biology and biotechnology
28. Affinity modification in a proteomic study of DNA repair ensembles
    Svetlana N. Khodyreva, Olga I. Lavrik · 2011 · Russian Journal of Bioorganic Chemistry
29. Identification and characterization of two uvrA genes of Xanthomonas axonopodis pathovar citri
    Che‐Hung Shen, Ying-Chieh Chiang, Chien-Hsiu Hsu, Mei-Kwei Yang · 2006 · Molecular Genetics and Genomics
30. Structural and functional analyses of the echinomycin resistance conferring protein Ecm16 from Streptomyces lasalocidi
    Priyanka Gade, Amanda Erlandson, Anwar Ullah, Xi Chen, Irimpan I. Mathews, Paola E. Mera, Chu‐Young Kim · 2023 · Scientific Reports
31. Nucleotide Excision Repair of Chemically Stabilized Analogues of DNA Interstrand Cross-Links Produced from Oxidized Abasic Sites
    Souradyuti Ghosh, Marc M. Greenberg · 2014 · Biochemistry
32. Single molecule iSCAT imaging reveals a fast, energy efficient search mode for the DNA repair protein UvrA
    Robert J. Charman, Neil M. Kad · 2022 · Nanoscale
33. Roles for Helicases as ATP-Dependent Molecular Switches
    Mark D. Szczelkun · 2012 · Advances in experimental medicine and biology
34. Cross-linked nucleic acids: isolation, structure, and biological role
    Vladimir A. Efimov, S. V. Fedyunin · 2010 · Biochemistry (Moscow)
35. Direct DNA Lesion Reversal and Excision Repair in Escherichia coli
    Sophie Couvé, Alexander A. Ishchenko, Olga S. Fedorova, Erlan M. Ramanculov, Jacques Laval, Murat K. Saparbaev · 2013 · EcoSal Plus
36. Identification of the target and mode of action for the prokaryotic nucleotide excision repair inhibitor ATBC
    Lorenzo Bernacchia, Antoine Paris, Arya Gupta, Alexandra A. Moores, Neil M. Kad · 2022 · Bioscience Reports
37. Interrogating the substrate specificity landscape of UvrC reveals novel insights into its non-canonical function
    Manoj Thakur, Rishikesh S. Parulekar, Sagar S. Barale, Kailas Dasharath Sonawane, Kalappa Muniyappa · 2022 · Biophysical Journal
38. Identification of Vibrio natriegens uvrA and uvrB genes and analysis of gene regulation using transcriptional reporter plasmids
    Keryn L. Simons, Susan M. Thomas, Peter Anderson · 2010 · The Journal of Microbiology
39. Introduction and Perspectives on the Chemistry and Biology of DNA Damage
    Nicholas E. Geacintov, Suse B. Broyde · 2010 · Wiley eBooks
40. Riemerella anatipestifer UvrC is required for iron utilization, biofilm formation and virulence
    Jialing Wang, Zuocheng Zou, Mengmeng Hu, Xinggen Shan, Ying Zhang, Yiqin Miao, Xiaoying Zhang, Nazrul Islam, Qinghai Hu · 2024 · Avian Pathology
41. Targeted Discovery and Characterization of Type‐II PKS‐NRPS Hybrid DNA‐Alkylating Antibiotics
    Qiuyue Nie, Shiqi Fang, Lian Wu, Ruo‐Qin Gao, Yu Hu, Dian Ding, Hai‐Xue Pan, Zeng‐Fei Pei, Jun‐Bin He, Qiang Zhou et al. · 2025 · Angewandte Chemie International Edition
42. Complete nucleotide sequence of pGS18, a 62.8-kb plasmid from Geobacillus stearothermophilus strain 18
    Milda Stuknytė, Simone Guglielmetti, Diego Mora, Nomeda Kuisienė, Carlo Parini, Donaldas Jonas Čitavičius · 2008 · Extremophiles
43. Involvement of Nucleotide Excision Repair and Rec-Dependent Pathway Genes for UV Radiation Resistance in Deinococcus irradiatisoli 17bor-2
    Sathiyamoorthy Subramaniyam, Sathiyaraj Srinivasan · 2023 · Genes
44. Developing novel antimicrobials by combining cancer chemotherapeutics with bacterial DNA repair inhibitors
    Lorenzo Bernacchia, Arya Gupta, Antoine Paris, Alexandra A. Moores, Neil M. Kad · 2023 · PLoS Pathogens
45. Local Genomic Surveillance of Invasive Streptococcus pyogenes in Eastern North Carolina (ENC) in 2022–2023
    Weihua Huang, John Markantonis, Changhong Yin, Joseph R. Pozdol, Kimberly P. Briley, John T. Fallon · 2024 · International Journal of Molecular Sciences
46. NER enzymes maintain genome integrity and suppress homologous recombination in the absence of exogenously induced DNA damage in Pseudomonas putida
    Julia Sidorenko, Kärt Ukkivi, Maia Kivisaar · 2014 · DNA repair
47. Exploiting Bacterial DNA Repair Systems as Drug Targets: A Review of the Current Scenario with Focus on Mycobacteria
    Taran Khanam, Ravishankar Ramachandran · 2014 · Journal of the Indian Institute of Science
48. Nucleotide Excision Repair Pathway in Mycobacteria
    Manoj Thakur, Kalappa Muniyappa · 2019 · Springer eBooks
49. An unexpected role for leucyl aminopeptidase in UV tolerance revealed by a genome-wide fitness assessment in a model cyanobacterium
    Elliot L. Weiss, Mingxu Fang, Arnaud Taton, Richard Szubin, Bernhard Ørn Palsson, B. Greg Mitchell, Susan S. Golden · 2022 · Proceedings of the National Academy of Sciences
50. Isolation of diverse Undibacterium-related strains from alpine lakes and re-examining the taxonomic status of this genus
    Huibin Lu, Lingyang Kong, Li Chen, Guangjie Chen, Jian-Jun Wang · 2025 · Systematic and Applied Microbiology
51. Mycothiol Peroxidase Activity as a Part of the Self-Resistance Mechanisms against the Antitumor Antibiotic Cosmomycin D
    Roger David Castillo Arteaga, Leandro M. Garrido, Brandán Pedre, Irina Helmle, Harald Gross, Bertolt Gust, Gabriel Padilla · 2022 · Microbiology Spectrum
52. Comparing Mfd- and UvrD-dependent models of transcription coupled DNA repair in live Escherichia coli using single-molecule tracking
    Elżbieta Kaja, Donata Vijande, Justyna Kowalczyk, Michał Michalak, Jacek Gapiński, Carolin Martina Kobras, Philippa Rolfe, Mathew Stracy · 2024 · DNA repair
53. Identification and Purification of the CPD Photolyase in Vibrio parahaemolyticus RIMD 2210633
    Zehong Su, Gaojian Lian, Kazuaki Mawatari, Ping Tang, Shuya He, Takaaki Shimohata, Yimou Wu, Weidong Yin, Akira Takahashi · 2015 · Photochemistry and Photobiology
54. Macrophage activation highlight an important role for NER proteins in the survival, latency and multiplication of Mycobacterium tuberculosis
    Manoj Thakur, Kalappa Muniyappa · 2022 · Tuberculosis
55. Plant Monoterpenes Camphor, Eucalyptol, Thujone, and DNA Repair
    Biljana Nikolić, Dragana Mitić-Ćulafić, Branka Vuković‐Gačić, Jelena Knežević‐Vukčević · 2019 · Springer eBooks
56. Nucleotide Excision Repair in the Three Domains of Life
    David Farnell · 2011 · Western Undergraduate Research Journal Health and Natural Sciences
57. DNA Damage and Transcription Elongation: Consequences and RNA Integrity
    Kristian Dreij, John A. Burns, Alexandra Dimitri, Lana Nirenstein, Taissia Noujnykh, David A. Scicchitano · 2010 · Wiley eBooks
58. Targeted genome mining for microbial antitumor agents acting through DNA intercalation
    Zhijie Zhao, Guiyun Zhao, Yi Chai, Wei Li, Kaihui Song, Wenbin Zhao, Hairong Li, Miaolian Wu, Zhan Mei Zhou, Yi‐Ling Du · 2023 · Synthetic and Systems Biotechnology
59. A new division of bacterial UvrA homologues
    Marta Marszałkowska, Magdalena Bil, Łukasz Kreft, Marcin Olszewski · 2014 · Biotechnologia
60. Genomic sequencing of a strain of Acinetobacter baumannii and potential mechanisms to antibiotics resistance
    Lei Zhao, Hongru Li, Ziwen Zhu, Mark R. Wakefield, Yujiang Fang, Ying Ye · 2017 · Infection Genetics and Evolution
61. Molecular Mechanisms of Action of Antimutagens from Sage (Salvia officinalis) and Basil (Ocimum basilicum)
    Biljana Nikoli, Dragana Miti-ulafi, Branka Vukovi-Gai, Jelena Kneevi-Vukevi · 2012 · InTech eBooks
62. Harnessing biosynthetic logic for next-generation ADC payloads
    Miaomiao Cai, Xinyuan Pan, Wei Shen, Sihui Bian, Dongbin Hu, Zhao‐Xun Liang, Yu Tang, Xiaohui Fan, Guang‐Lei Ma · 2026 · Chemical Society Reviews
63. Role of photolyase in stress tolerance and virulence of plant-pathogenic bacterium Pseudomonas cichorii JBC1
    Nguyen Van Khanh, Shamjetsabam Gangarani Devi, Yong Hoon Lee · 2026 · Applied and Environmental Microbiology
64. Modeling the Interactions of the Nucleotide Excision Repair UvrA2 Dimer with DNA
    Tsvetan G. Gantchev, Darel John Hunting · 2010 · Biochemistry
65. Structural dynamics and interactions of Xeroderma pigmentosum complementation group A (XPA98–210) with damaged DNA
    Sushmita Pradhan, Venkata Satish Kumar Mattaparthi · 2017 · Journal of Biomolecular Structure and Dynamics
66. Single-molecule studies of helicases and translocases in prokaryotic genome-maintenance pathways
    Kelsey S. Whinn, Antoine M. van Oijen, Harshad B. Ghodke · 2021 · DNA repair
67. A novel papillation assay for the identification of genes affecting mutation rate in Pseudomonas putida and other pseudomonads
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68. When One Protein Does the Job of Many
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69. Compromised DNA Damage Repair Promotes Genetic Instability of the Genomic Magnetosome Island in Magnetospirillum magneticum AMB-1
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70. Insight into the DNA repair mechanism operating during cell cycle checkpoints in eukaryotic cells
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71. Characterizing Intense Pulsed Light-Elicited Effects on Escherichia coli and Non-Fat Dry Milk Through Metabolomic and Chemometric Analysis
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72. Helicases required for nucleotide excision repair: structure, function and mechanism
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73. Optimizing Divalent Cation Supplementation to Enhance the Production of the Kimchi Starter Strain Latilactobacillus curvatus WiKim0094
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74. Biology and Nanotechnology
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75. Identification of a novel DNA repair inhibitor using an in silico driven approach shows effective combinatorial activity with genotoxic agents against multidrug‐resistant Escherichia coli
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76. Dna Repair Mechanisms As Drug Targets In Prokaryotes
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77. PRINCIPALES MECANISMOS DE REPARACIÓN DE DAÑOS EN LA MOLÉCULA DE ADN
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78. Strategies and Methods of Transcription-Coupled Repair Studies In Vitro and In Vivo
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79. Probing Protein–DNA Conformational Dynamics in DNA Damage Recognition: Xeroderma Pigmentosum Group A Stabilizes the Damaged DNA-RPA14 Complex by Controlling Conformational Fluctuation Dynamics
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80. Three putative DNA replication/repair elements encoding genes confer self-resistance to distamycin in Streptomyces netropsis
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81. Characterization of the multifunctional XPG protein during Nucleotide-excision-repair
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82. Bacterial type 1A topoisomerases maintain the stability of the genome by preventing and dealing with R-loop-and nucleotide excision repair-dependent topological stress
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83. Mutagenesis
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84. Adapting to UV: Integrative Genomic and Structural Analysis in Bacteria from Chilean Extreme Environments
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85. Inhibition of Mycobacterium tuberculosis UvrB by small molecules: Potent NER disruption and structural insights into dimer conformation
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86. Isolation and characterization of two new species, Hymenobacter mellowenesis sp. nov. and Hymenobacter aranciens sp. nov., from soil
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87. Self-resistance as a guide to discovering bioactive natural products
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88. A DNA damage-activated kinase phosphorylates a transcriptional repressor to control bacterial immune pathway expression
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89. Rufibacter roseolus sp. nov. and Rufibacter aurantiacus sp. nov., isolated from desert soil
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90. Nucleotide Excision Repair, Bacterial: The UvrABCD System
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91. Structural and biochemical analysis of the UvrA binding module of the bacterial transcription repair coupling factor Mfd
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92. Genes Affecting the Repair and Survival of Escherichia coli Following Psoralen-Induced Damage: a DNA Interstrand Crosslinking Agent
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93. The characterisation of the interaction between PcrA and RNA polymerase
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94. Functional relevance of spontaneous alternative splice variants of xeroderma pigmentosum genes: Prognostic marker for skin cancer risk and disease outcome?
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95. Enrichment ecology of Listeria monocytogenes : Towards a more rapid enrichment‐based detectionmethod
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97. Sequence Effects on the Repair and Replication of Arylamine-DNA Adducts
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98. The Role of Nucleotide Excision Repair in Restoring Replication Following UV-Induced Damage in Escherichia coli
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99. Subcloning, Expression and Purification of Functional E. coli Nucleotide Excision Repair Protein UvrA Using IMPACT-CN System
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100. Busca de genes relacionados a fenótipos mutadores em Caulobacter crescentus.
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