Prokaryotic Nucleotide Excision Repair: The UvrABC System
Abstract
ADVERTISEMENT RETURN TO ISSUEPREVArticleNEXTProkaryotic Nucleotide Excision Repair: The UvrABC SystemJames J. Truglio, Deborah L. Croteau, Bennett Van Houten, and Caroline KiskerView Author Information Department of Pharmacological Sciences, State University of New York at Stony Brook, Stony Brook, New York 11794-5115, Laboratory of Molecular Genetics, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina 27709, and Rudolf Virchow Center for Experimental Biomedicine, Institute for Structural Biology, University of Würzburg, Versbacher Str. 9, 97078 Würzburg, Germany Cite this: Chem. Rev. 2006, 106, 2, 233–252Publication Date (Web):January 28, 2006Publication History Received13 May 2005Published online28 January 2006Published inissue 1 February 2006https://pubs.acs.org/doi/10.1021/cr040471uhttps://doi.org/10.1021/cr040471uresearch-articleACS PublicationsCopyright © 2006 American Chemical SocietyRequest reuse permissionsArticle Views4157Altmetric-Citations255LEARN ABOUT THESE METRICSArticle Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to reflect usage leading up to the last few days.Citations are the number of other articles citing this article, calculated by Crossref and updated daily. Find more information about Crossref citation counts.The Altmetric Attention Score is a quantitative measure of the attention that a research article has received online. Clicking on the donut icon will load a page at altmetric.com with additional details about the score and the social media presence for the given article. Find more information on the Altmetric Attention Score and how the score is calculated. Share Add toView InAdd Full Text with ReferenceAdd Description ExportRISCitationCitation and abstractCitation and referencesMore Options Share onFacebookTwitterWechatLinked InRedditEmail Other access optionsGet e-Alertsclose SUBJECTS:Genetics,Lesions,Monomers,Oligomers,Peptides and proteins Get e-Alerts
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UvrA dimer is the key complex for damage recognition that scans DNA; UvrB catalyzes local dissociation of the DNA helix and provides a scaffold for UvrC.
“The UvrA dimer is the key complex for the damage recognition that scans DNA in the search of damage, while UvrB catalyzes the local dissociation of the DNA helix and provides a scaffold for UvrC protein.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
Detection can also be carried out by transcriptional-repair coupling factor (TRCF, also known as Mfd).
“The detection step can also be carried out by transcriptional-repair coupling factor (TRCF, also known as Mfd).”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
UvrA dimer dissociates from the complex, leaving UvrB bound to DNA waiting for UvrC engagement.
“In the next step, the UvrA dimer dissociates form the complex, leaving UvrB bound to the DNA waiting for UvrC engagement in the repair process.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
Transcription-coupled repair is induced mainly by stalling of RNA polymerase at sites of damage.
“The transcription-coupled repair is induced mainly by the stalling of RNA polymerase at the sites of damage.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
UvrC homolog Cho may be incorporated; Cho cleaves DNA 4 nucleotides farther away than the normal cleavage site on the 3′ side of the lesion.
“Alternatively, UvrC homolog excinuclease (Cho) may be incorporated in the DNA process; however, this nuclease cleaves DNA molecule 4 nucleotides farther away than the normal cleavage site on the 3′ side of the lesion.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
TRCF allows removal of RNA polymerase from the damaged site and subsequent UvrABC-mediated repair.
“TRCF allows for the removal of RNA polymerase from the damaged site and subsequent UvrABC-mediated repair.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
In prokaryotes, DNA damage is detected by a dimer of UvrA working together with UvrB.
“In prokaryotes, DNA damage is detected by dimer of UvrABC system protein (UvrA) working together with UvrB.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
DNA polymerase I and DNA ligase restore the proper DNA sequence.
“The DNA polymerase I (Pol 1) and DNA ligase restores the proper DNA sequence [90,91,92].”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
The 3′-incision precedes the 5′-incision for both Cho and UvrC-mediated repair.
“The 3′-incision precedes the 5′-incision for both Cho and UvrC-mediated repair.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
UvrD protein acts as a helicase that removes hydrogen bonds between complementary nucleotides.
“In this process, the UvrD protein acts as a helicase that removes hydrogen bonds between the complementary nucleotides.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
A 12-13 nt long damage-containing fragment is released (16 nt in the case of Cho protein).
“Finally, 12–13 nt. long damage containing fragment is released (16 nt in the case of Cho protein).”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
UvrC acts as an endonuclease that nicks DNA 7-8 nucleotides from the 5′-end and 4-5 nucleotides from the 3′-end of the damaged site.
“UvrC acts as an endonuclease that nicks the DNA 7-8 nucleotides from 5′-end and 4–5 nucleotides from the 3′-end of the damaged site.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [91]
Cites
Friedberg, E. C., Walker, G. C., Siede, W., Wood, R. D., Schultz, R. A., & Ellenberger, T. (2005) · doi:10.1128/9781555816704 · Cited by 5,683 · see citing works
Genome maintenance mechanisms for preventing cancer
Hoeijmakers, J. H. J. (2001) · Nature · doi:10.1038/35077232 · Cited by 3,939 · see citing works
Bootsma, D., & Hoeijmakers, J. H. J. (1996) · Trends in Genetics · doi:10.1016/0168-9525(96)81408-9 · Cited by 2,285 · see citing works
Lindahl, T. L., & Wood, R. D. (1999) · Science · doi:10.1126/science.286.5446.1897 · Cited by 1,489 · see citing works
Friedberg, E. C. (2003) · Nature · doi:10.1038/nature01408 · Cited by 1,177 · see citing works
Sancar, A. (1996) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.65.070196.000355 · Cited by 1,131 · see citing works
THE DISAPPEARANCE OF THYMINE DIMERS FROM DNA: AN ERROR-CORRECTING MECHANISM
Setlow, R. B., & Carrier, W. L. (1964) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.51.2.226 · Cited by 984 · see citing works
Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA
Bruner, S. D., Norman, D. P. G., & Verdine, G. L. (2000) · Nature · doi:10.1038/35002510 · Cited by 972 · see citing works
Structural Biology of Rad50 ATPase
Hopfner, K., Kärcher, A., Shin, D. S., Craig, L., Arthur, L. M., Carney, J. P., & Tainer, J. A. (2000) · Cell · doi:10.1016/s0092-8674(00)80890-9 · Cited by 911 · see citing works
Velankar, S. S., Soultanas, P., Dillingham, M. S., Subramanya, H. S., & Wigley, D. B. (1999) · Cell · doi:10.1016/s0092-8674(00)80716-3 · Cited by 785 · see citing works
Smith, P. C., Karpowich, N., Millen, L., Moody, J. E., Rosen, J., Thomas, P. J., & Hunt, J. F. (2002) · Molecular Cell · doi:10.1016/s1097-2765(02)00576-2 · Cited by 773 · see citing works
RELEASE OF ULTRAVIOLET LIGHT-INDUCED THYMINE DIMERS FROM DNA IN E. COLI K-12
Boyce, R. P., & Howard-Flanders, P. (1964) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.51.2.293 · Cited by 708 · see citing works
Molecular Mechanism of Transcription-Repair Coupling
Selby, C. P., & Sancar, A. (1993) · Science · doi:10.1126/science.8465200 · Cited by 656 · see citing works
Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA
Obmolova, G., Ban, C., Hsieh, P., & Yang, W. (2000) · Nature · doi:10.1038/35037509 · Cited by 647 · see citing works
The crystal structure of DNA mismatch repair protein MutS binding to a G·T mismatch
Lamers, M. H., Anastassis Perrakis, A., Enzlin, J. H., Winterwerp, H. H. K., de Wind, N., & Sixma, T. K. (2000) · Nature · doi:10.1038/35037523 · Cited by 633 · see citing works
Sancar, A., & Rupp, W. D. (1983) · Cell · doi:10.1016/0092-8674(83)90354-9 · Cited by 627 · see citing works
Kim, J. L., Morgenstern, K. A., Griffith, J. P., Dwyer, M. D., Thomson, J. A., Murcko, M. A., Lin, C., & Caron, P. R. (1998) · Structure · doi:10.1016/s0969-2126(98)00010-0 · Cited by 617 · see citing works
A nucleotide-flipping mechanism from the structure of human uracil–DNA glycosylase bound to DNA
Slupphaug, G., Mol, C. D., Kavli, B., Arvai, A. S., Krokan, H. E., & Tainer, J. A. (1996) · Nature · doi:10.1038/384087a0 · Cited by 581 · see citing works
Identification of additional genes belonging to the LexA regulon in Escherichia coli
de Henestrosa, A. R. F., Ogi, T., Aoyagi, S., Chafin, D. R., Hayes, J. J., Ohmori, H., & Woodgate, R. (2000) · Molecular Microbiology · doi:10.1046/j.1365-2958.2000.01826.x · Cited by 566 · see citing works
Howard-Flanders, P., Boyce, R. P., & Theriot, L. (1966) · Genetics · doi:10.1093/genetics/53.6.1119 · Cited by 565 · see citing works
Conserved domains in DNA repair proteins and evolution of repair systems
Aravind, L. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.5.1223 · Cited by 561 · see citing works
Mechanisms of DNA Excision Repair
Sancar, A. (1994) · Science · doi:10.1126/science.7801120 · Cited by 555 · see citing works
Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure.
THAYER, M. M., Ahern, H., Xing, D., Cunningham, R. P., & Tainer, J. A. (1995) · The EMBO Journal · doi:10.1002/j.1460-2075.1995.tb00083.x · Cited by 500 · see citing works
Korolev, S., Hsieh, J., Gauss, G. H., Lohman, T. M., & Waksman, G. (1997) · Cell · doi:10.1016/s0092-8674(00)80525-5 · Cited by 491 · see citing works
Nucleotide excision repair in Escherichia coli
Houten, B. V. (1990) · Microbiological Reviews · doi:10.1128/mr.54.1.18-51.1990 · Cited by 419 · see citing works
Doherty, A. J. (1996) · Nucleic Acids Research · doi:10.1093/nar/24.13.2488 · Cited by 376 · see citing works
Passing the baton in base excision repair.
Kunkel, T. A., & Wilson, S. H. (2000) · Nature Structural Biology · doi:10.1038/73260 · Cited by 345 · see citing works
Helicase motifs: the engine that powers DNA unwinding
Hall, M. C., & Matson, S. W. (1999) · Molecular Microbiology · doi:10.1046/j.1365-2958.1999.01659.x · Cited by 320 · see citing works
Functional sites of interaction between release factor RF1 and the ribosome.
Wilson, K. S., Nakamura, Y., Ito, K., & Noller, H. F. (2000) · Nature Structural Biology · doi:10.1038/82818 · Cited by 309 · see citing works
Crystal Structure of a Human Alkylbase-DNA Repair Enzyme Complexed to DNA
Lau, A. Y., Schärer, O. D., Samson, L. D., Verdine, G. L., & Ellenberger, T. (1998) · Cell · doi:10.1016/s0092-8674(00)81755-9 · Cited by 289 · see citing works
The helicase activity associated with hepatitis C virus nonstructural protein 3 (NS3)
Tai, C. L., K, W., Chen, D., & Hwang, L. H. (1996) · Journal of Virology · doi:10.1128/jvi.70.12.8477-8484.1996 · Cited by 275 · see citing works
Composite Active Site of an ABC ATPase
Junop, M. S., Obmolova, G., Rausch, K. M., Hsieh, P., & Yang, W. (2001) · Molecular Cell · doi:10.1016/s1097-2765(01)00149-6 · Cited by 262 · see citing works
Huang, J. C., Hsu, D. S., Kazantsev, A. G., & Sancar, A. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.25.12213 · Cited by 230 · see citing works
Caron, P. R., Kushner, S. R., & Grossman, L. (1985) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.82.15.4925 · Cited by 226 · see citing works
Effect of DNA polymerase I and DNA helicase II on the turnover rate of UvrABC excision nuclease.
Husain, I., Houten, B. V., Thomas, D. C., Abdel‐Monem, M., & Sancar, A. (1985) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.82.20.6774 · Cited by 224 · see citing works
Rad50/SMC proteins and ABC transporters: unifying concepts from high-resolution structures
Hopfner, K. (2003) · Current Opinion in Structural Biology · doi:10.1016/s0959-440x(03)00037-x · Cited by 210 · see citing works
Reardon, J. T., Nichols, A. F., Keeney, S., Smith, C. A., Taylor, J., Linn, S., & Sancar, A. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)36924-8 · Cited by 208 · see citing works
Houten, B. V., Gamper, H., Holbrook, S. R., Hearst, J. E., & Sancar, A. (1986) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.83.21.8077 · Cited by 204 · see citing works
Orren, D. K., & Sancar, A. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.14.5237 · Cited by 203 · see citing works
Recognition of DNA Adducts by Human Nucleotide Excision Repair
Gunz, D., Heß, M., & Naegeli, H. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.41.25089 · Cited by 197 · see citing works
DNase I-induced DNA conformation
Lahm, A., & Suck, D. (1991) · Journal of Molecular Biology · doi:10.1016/0022-2836(91)90502-w · Cited by 193 · see citing works
Crystal structure of UvrB, a DNA helicase adapted for nucleotide excision repair
Theis, K. W., Chen, P. J., Skorvaga, M., Houten, B. V., & Kisker, C. (1999) · The EMBO Journal · doi:10.1093/emboj/18.24.6899 · Cited by 192 · see citing works
Self-citationDoolittle, R. F., Johnson, M. S., Husain, I., Houten, B. V., Thomas, D. C., & Sancar, A. (1986) · Nature · doi:10.1038/323451a0 · Cited by 187 · see citing works
Structural Biochemistry of ATP-Driven Dimerization and DNA-Stimulated Activation of SMC ATPases
Lammens, A., Schele, A., & Hopfner, K. (2004) · Current Biology · doi:10.1016/j.cub.2004.09.044 · Cited by 180 · see citing works
Lin, J., & Sancar, A. (1989) · Biochemistry · doi:10.1021/bi00446a002 · Cited by 177 · see citing works
Crystal structure of NAD+‐dependent DNA ligase: modular architecture and functional implications
Lee, J. Y., Chang, C., Song, H. K., Moon, J., Yang, J. K., Kim, H.-K., Kwon, S., & Suh, S. W. (2000) · The EMBO Journal · doi:10.1093/emboj/19.5.1119 · Cited by 174 · see citing works
Sancar, A., & Hearst, J. E. (1993) · Science · doi:10.1126/science.8451638 · Cited by 158 · see citing works
The XPA protein is a zinc metalloprotein with an ability to recognize various kinds of DNA damage
Asahina, H., Kuraoka, I., Shirakawa, M., Morita, E. H., Miura, N., Miyamoto, I., Ohtsuka, E., Okada, Y., & Tanaka, K. (1994) · Mutation Research/DNA Repair · doi:10.1016/0921-8777(94)90034-5 · Cited by 156 · see citing works
Enzymatic properties of purified Escherichia coli uvrABC proteins.
Yeung, A. T., Mattes, W. B., Oh, E. Y., & Grossman, L. I. (1983) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.80.20.6157 · Cited by 154 · see citing works
Orren, D. K., Selby, C. P., Hearst, J. E., & Sancar, A. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)48352-4 · Cited by 150 · see citing works
Common fold in helix-hairpin-helix proteins
Shao, X. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.14.2643 · Cited by 149 · see citing works
Löwe, J., Cordell, S. C., & van den Ent, F. (2001) · Journal of Molecular Biology · doi:10.1006/jmbi.2000.4379 · Cited by 148 · see citing works
Carcinogens preferentially bind at methylated CpG in the p53 mutational hot spots.
Chen, J. X., Zheng, Y., West, M., & Tang, M. (1998) · PubMed · Cited by 145 · see citing works
Escherichia coli DNA photolyase stimulates uvrABC excision nuclease in vitro.
Sancar, A., Franklin, K., & Sancar, G. B. (1984) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.81.23.7397 · Cited by 141 · see citing works
Solution structure of the DNA- and RPA-binding domain of the human repair factor XPA
Ikegami, T., Kuraoka, I., Saijo, M., Kodo, N., Kyogoku, Y., Morikawa, K., Tanaka, K., & Shirakawa, M. (1998) · Nature Structural & Molecular Biology · doi:10.1038/1400 · Cited by 139 · see citing works
Samson, L. D., Thomale, J., & Rajewsky, M. F. (1988) · The EMBO Journal · doi:10.1002/j.1460-2075.1988.tb03066.x · Cited by 138 · see citing works
Geacintov, N. E., Broyde, S. B., Buterin, T., Naegeli, H., Wu, M., Yan, S. F., & Patel, D. J. (2002) · Biopolymers · doi:10.1002/bip.10239 · Cited by 130 · see citing works
Catalytic Mechanisms of Restriction and Homing Endonucleases
Galburt, E. A., & Stoddard, B. L. (2002) · Biochemistry · doi:10.1021/bi020467h · Cited by 126 · see citing works
Crystal structure of the Holliday junction DNA in complex with a single RuvA tetramer
Ariyoshi, M., Nishino, T., Iwasaki, H., Shinagawa, H., & Morikawa, K. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.140212997 · Cited by 125 · see citing works
Lin, J., & Sancar, A. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)37097-8 · Cited by 123 · see citing works
Purification and properties of the uvrA protein from Escherichia coli.
Seeberg, E. C., & Steinum, A.-L. (1982) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.79.4.988 · Cited by 123 · see citing works
Amplification and purification of UvrA, UvrB, and UvrC proteins of Escherichia coli.
Thomas, D. C., Levy, M. S., & Sancar, A. (1985) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)39318-3 · Cited by 122 · see citing works
Repair replication of DNA in bacteria: Irrelevance of chemical nature of base defect
Hanawalt, P. C., & Haynes, R. H. (1965) · Biochemical and Biophysical Research Communications · doi:10.1016/0006-291x(65)90147-6 · Cited by 122 · see citing works
Molecular mechanisms of DNA repair inhibition by caffeine.
Selby, C. P., & Sancar, A. (1990) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.87.9.3522 · Cited by 121 · see citing works
Formation and enzymatic properties of the UvrB.DNA complex.
Orren, D. K., & Sancar, A. (1990) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)55468-5 · Cited by 120 · see citing works
Verhoeven, E. E. A., van Kesteren, M., Moolenaar, G. F., Visse, R., & Goosen, N. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.275.7.5120 · Cited by 120 · see citing works
A novel endonuclease mechanism directly visualized for I-PpoI.
Galburt, E. A., Chevalier, B. S., Tang, W., Jurica, M. S., Flick, K. E., Monnat, R. J., & Stoddard, B. L. (1999) · Nature Structural Biology · doi:10.1038/70027 · Cited by 118 · see citing works
Crystal Structure of an Octameric RuvA–Holliday Junction Complex
Roe, S. M., Barlow, T., Brown, T., Oram, M., Keeley, A., Tsaneva, I. R., & Pearl, L. H. (1998) · Molecular Cell · doi:10.1016/s1097-2765(00)80280-4 · Cited by 117 · see citing works
Kowalski, J. C., Belfort, M., Stapleton, M. A., Holpert, M., Dansereau, J. T., Pietrokovski, S., Baxter, S. M., & Derbyshire, V. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.10.2115 · Cited by 117 · see citing works
UvrABC nuclease complex repairs thymine glycol, an oxidative DNA base damage
Kow, Y. W., Wallace, S. S., & Houten, B. V. (1990) · Mutation Research/DNA Repair · doi:10.1016/0921-8777(90)90068-g · Cited by 114 · see citing works
Ikenaga, M., Ichikawa-Ryo, H., & Kondo, S. (1975) · Journal of Molecular Biology · doi:10.1016/0022-2836(75)90233-8 · Cited by 108 · see citing works
The presence of two UvrB subunits in the UvrAB complex ensures damage detection in both DNA strands
Verhoeven, E. E. A., Wyman, C., Moolenaar, G. F., & Goosen, N. (2002) · The EMBO Journal · doi:10.1093/emboj/cdf396 · Cited by 107 · see citing works
DNase I footprint of ABC excinuclease.
Houten, B. V., Gamper, H., Sancar, A., & Hearst, J. E. (1987) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)45185-x · Cited by 106 · see citing works
Large-scale purification and characterization of the Escherichia coli rep gene product
Lohman, T. M., Chao, K. L., Green, J. M., Sage, S., & Runyon, G. T. (1989) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)81778-1 · Cited by 106 · see citing works
Dimerization of Escherichia coli UvrA and its binding to undamaged and ultraviolet light damaged DNA
Mazur, S. J., & Grossman, L. I. (1991) · Biochemistry · doi:10.1021/bi00232a009 · Cited by 106 · see citing works
Identification of a damaged-DNA binding domain of the XPA protein
Kuraoka, I., Morita, E. H., Saijo, M., Matsuda, T., Morikawa, K., Shirakawa, M., & Tanaka, K. (1996) · Mutation Research/DNA Repair · doi:10.1016/0921-8777(95)00038-0 · Cited by 106 · see citing works
Reactions of the UVRABC excision nuclease with DNA damaged by diamminedichloroplatinum(II)
Beck, D. J., Popoff, S. C., Sancar, A., & Rupp, W. D. (1985) · Nucleic Acids Research · doi:10.1093/nar/13.20.7395 · Cited by 105 · see citing works
DNA Repair Excision Nuclease Attacks Undamaged DNA
Branum, M. E., Reardon, J. T., & Sancar, A. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m101032200 · Cited by 103 · see citing works
Škorvaga, M., Theis, K. W., Mandavilli, B. S., Kisker, C., & Houten, B. V. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m108847200 · Cited by 103 · see citing works
Self-citationLin, J., Phillips, A. M., Hearst, J. E., & Sancar, A. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)37098-x · Cited by 102 · see citing works
Minko, I. G., Zou, Y., & Lloyd, R. S. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.042700399 · Cited by 101 · see citing works
Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus
Machius, M., Henry, L., Palnitkar, M., & Deisenhofer, J. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.21.11717 · Cited by 100 · see citing works
Bird, L. E. (1998) · Nucleic Acids Research · doi:10.1093/nar/26.11.2686 · Cited by 98 · see citing works
Strand opening by the UvrA2B complex allows dynamic recognition of DNA damage
Zou, Y., & Houten, B. V. (1999) · The EMBO Journal · doi:10.1093/emboj/18.17.4889 · Cited by 98 · see citing works
Houten, B. V., Gamper, H., Hearst, J. E., & Sancar, A. (1986) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)66993-5 · Cited by 97 · see citing works
Protein interactions with platinum–DNA adducts: from structure to function
Chaney, S. G., Campbell, S. L., Temple, B. R. S., Bassett, E., Wu, Y., & Faldu, M. (2004) · Journal of Inorganic Biochemistry · doi:10.1016/j.jinorgbio.2004.04.024 · Cited by 97 · see citing works
Repair of O6-Methylguanine by ABC Excinuclease of Escherichia coli in vitro
Voigt, J. M., Houten, B. V., Sancar, A., & Topal, M. D. (1989) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)83715-2 · Cited by 94 · see citing works
Mechanism of action of the Escherichia coli UvrABC nuclease: Clues to the damage recognition problem
Houten, B. V., & Snowden, A. (1993) · BioEssays · doi:10.1002/bies.950150108 · Cited by 94 · see citing works
Cheng, S., Houten, B. V., Gamper, H., Sancar, A., & Hearst, J. E. (1988) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)68152-9 · Cited by 92 · see citing works
Some aspects of the SOS response system--a critical survey.
Janion, C. (2001) · Acta Biochimica Polonica · doi:10.18388/abp.2001_3894 · Cited by 91 · see citing works
Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI
Roey, P. V., Meehan, L., Kowalski, J. C., Belfort, M., & Derbyshire, V. (2002) · Nature Structural Biology · doi:10.1038/nsb853 · Cited by 91 · see citing works
Snowden, A., Kow, Y. W., & Houten, B. V. (1990) · Biochemistry · doi:10.1021/bi00483a013 · Cited by 89 · see citing works
Moolenaar, G. F., Franken, K. L. M. C., Dijkstra, D. M., THOMAS‐OATES, J. E., Visse, R., van de Putte, P., & Goosen, N. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.51.30508 · Cited by 89 · see citing works
Nucleotide excision repair, a tracking mechanism in search of damage
Grossman, L. I., & Thiagalingam, S. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)85273-0 · Cited by 88 · see citing works
Hong, Z., Ferrari, E., Wright-Minogue, J., Chase, R., Risano, C., Seelig, G., Lee, C. G. L., & Kwong, A. D. (1996) · Journal of Virology · doi:10.1128/jvi.70.7.4261-4268.1996 · Cited by 88 · see citing works
Parniewski, P., Bacolla, A., Jaworski, A., & Wells, R. D. (1999) · Nucleic Acids Research · doi:10.1093/nar/27.2.616 · Cited by 86 · see citing works
Structure and Function of the UvrB Protein
Hsu, D. S., Kim, S., Sun, Q. H., & Sancar, A. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.14.8319 · Cited by 84 · see citing works
Houten, B. V., Gamper, H., Hearst, J. E., & Sancar, A. (1988) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)37426-x · Cited by 83 · see citing works
Buchko, G. W., Daughdrill, G. W., de Lorimier, R., Sudha Rao B. K., Isern, N. G., Lingbeck, J. M., Taylor, J.-S., Wold, M. S., Gochin, M., Spicer, L. D., et al. (1999) · Biochemistry · doi:10.1021/bi991755p · Cited by 83 · see citing works
Cho, a second endonuclease involved in Escherichia coli nucleotide excision repair
Moolenaar, G. F., van Rossum-Fikkert, S. E., van Kesteren, M., & Goosen, N. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.032584099 · Cited by 81 · see citing works
ATP-dependent partitioning of the DNA template into supercoiled domains by Escherichia coli UvrAB.
Koo, H. S., Claassen, L., Grossman, L. I., & Liu, L. F. (1991) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.88.4.1212 · Cited by 81 · see citing works
Role of the Escherichia coli Nucleotide Excision Repair Proteins in DNA Replication
Moolenaar, G. F., Moorman, C., & Goosen, N. (2000) · Journal of Bacteriology · doi:10.1128/jb.182.20.5706-5714.2000 · Cited by 80 · see citing works
Repair of psoralen and acetylaminofluorene DNA adducts by ABC excinuclease
Sancar, A., Franklin, K. A., Sancar, G. B., & Tang, M.-S. (1985) · Journal of Molecular Biology · doi:10.1016/0022-2836(85)90316-x · Cited by 79 · see citing works
Electron microscopic study of (A)BC excinuclease
Shi, Q., Thresher, R., Sancar, A., & Griffith, J. D. (1992) · Journal of Molecular Biology · doi:10.1016/0022-2836(92)90957-l · Cited by 78 · see citing works
Both ATPase sites of Escherichia coli UvrA have functional roles in nucleotide excision repair
Thiagalingam, S., & Grossman, L. I. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)99176-3 · Cited by 78 · see citing works
Role of ATP hydrolysis by UvrA and UvrB during nucleotide excision repair
Goosen, N., & Moolenaar, G. F. (2001) · Research in Microbiology · doi:10.1016/s0923-2508(01)01211-6 · Cited by 78 · see citing works
Visse, R., de Ruijter, M., Moolenaar, G. F., & van de Putte, P. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)50487-2 · Cited by 77 · see citing works
Formation of DNA Repair Intermediates and Incision by the ATP-dependent UvrB-UvrC Endonuclease
Zou, Y., Walker, R. K., Bassett, H., Geacintov, N. E., & Houten, B. V. (1997) · Journal of Biological Chemistry · doi:10.1074/jbc.272.8.4820 · Cited by 77 · see citing works
Pelletier, H., & Sawaya, M. R. (1996) · Biochemistry · doi:10.1021/bi960790i · Cited by 77 · see citing works
ATPase activity of the UvrA and UvrAB protein complexes of theEscherichia coliUvrABC endonuclease
Oh, E. Y., Claassen, L., Thiagalingam, S., Mazur, S. J., & Grossman, L. I. (1989) · Nucleic Acids Research · doi:10.1093/nar/17.11.4145 · Cited by 76 · see citing works
The nucleotide excision repair protein UvrB, a helicase-like enzyme with a catch
Theis, K. W., Škorvaga, M., Machius, M., Nakagawa, N., Houten, B. V., & Kisker, C. (2000) · Mutation Research/DNA Repair · doi:10.1016/s0921-8777(00)00032-x · Cited by 76 · see citing works
Self-citationInitiation of Repair of DNA−Polypeptide Cross-Links by the UvrABC Nuclease
Minko, I. G., Kurtz, A., Croteau, D. L., Houten, B. V., Harris, T. M., & Lloyd, R. S. (2005) · Biochemistry · doi:10.1021/bi0478805 · Cited by 75 · see citing works
Self-citationNakagawa, N., Sugahara, M., Masui, R., Kato, R., Fukuyama, K., & Kuramitsu, S. (1999) · The Journal of Biochemistry · doi:10.1093/oxfordjournals.jbchem.a022566 · Cited by 75 · see citing works
Mutations in the Escherichia coli UvrB ATPase motif compromise excision repair capacity.
Seeley, T. W., & Grossman, L. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.17.6577 · Cited by 75 · see citing works
Verhoeven, E. E. A., Wyman, C., Moolenaar, G. F., Hoeijmakers, J. H. J., & Goosen, N. (2001) · The EMBO Journal · doi:10.1093/emboj/20.3.601 · Cited by 74 · see citing works
Yeung, A. T., Mattes, W. B., & Grossman, L. I. (1986) · Nucleic Acids Research · doi:10.1093/nar/14.6.2567 · Cited by 73 · see citing works
Involvement of Molecular Chaperonins in Nucleotide Excision Repair
Zou, Y., Crowley, D. J., & Houten, B. V. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.21.12887 · Cited by 71 · see citing works
Analyzing the Handoff of DNA from UvrA to UvrB Utilizing DNA-Protein Photoaffinity Labeling
DellaVecchia, M. J., Croteau, D. L., Škorvaga, M., Dezhurov, S. V., Lavrik, O. I., & Houten, B. V. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m408659200 · Cited by 71 · see citing works
Self-citationMoolenaar, G. F., Visse, R., Ortiz-Buysse, M., Goosen, N., & van de Putte, P. (1994) · Journal of Molecular Biology · doi:10.1006/jmbi.1994.1447 · Cited by 71 · see citing works
Navaratnam, S., Myles, G. M., Strange, R. W., & Sancar, A. (1989) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)71588-3 · Cited by 70 · see citing works
Repair of N-methyl-N'-nitro-N-nitrosoguanidine-induced DNA damage by ABC excinuclease
Houten, B. V., & Sancar, A. (1987) · Journal of Bacteriology · doi:10.1128/jb.169.2.540-545.1987 · Cited by 70 · see citing works
Moolenaar, G. F., Höglund, L., & Goosen, N. (2001) · The EMBO Journal · doi:10.1093/emboj/20.21.6140 · Cited by 69 · see citing works
Myles, G. M., Hearst, J. E., & Sancar, A. (1991) · Biochemistry · doi:10.1021/bi00230a004 · Cited by 69 · see citing works
Repair of cis-platinum-DNA adducts by ABC excinuclease in vivo and in vitro
Husain, I., Chaney, S. G., & Sancar, A. (1985) · Journal of Bacteriology · doi:10.1128/jb.163.3.817-823.1985 · Cited by 67 · see citing works
Interactions between UvrA and UvrB: the role of UvrB's domain 2 in nucleotide excision repair
Truglio, J. J., Croteau, D. L., Škorvaga, M., DellaVecchia, M. J., Theis, K. W., Mandavilli, B. S., Houten, B. V., & Kisker, C. (2004) · The EMBO Journal · doi:10.1038/sj.emboj.7600263 · Cited by 67 · see citing works
Self-citationThe role of Escherichia coli UvrB in nucleotide excision repair.
Seeley, T. W., & Grossman, L. I. (1990) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)39093-3 · Cited by 66 · see citing works
Bertrand-Burggraf, E., Selby, C. P., Hearst, J. E., & Sancar, A. (1991) · Journal of Molecular Biology · doi:10.1016/0022-2836(91)90854-y · Cited by 66 · see citing works
The effect ofEscherichia coliUvr protein binding on the topology of supercoiled DNA
Oh, E. Y., & Grossman, L. I. (1986) · Nucleic Acids Research · doi:10.1093/nar/14.21.8557 · Cited by 65 · see citing works
General method for quantifying base adducts in specific mammalian genes.
Thomas, D. C., Morton, A. G., Bohr, V. A., & Sancar, A. (1988) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.85.11.3723 · Cited by 63 · see citing works
Alekseyev, Y. O. (2004) · Carcinogenesis · doi:10.1093/carcin/bgh098 · Cited by 63 · see citing works
Sequences of theE. coli uvrBgene and protein
Arikan, E., Kulkami, M. S., Thomas, D. C., & Sancar, A. (1986) · Nucleic Acids Research · doi:10.1093/nar/14.6.2637 · Cited by 62 · see citing works
DNA Repair Mechanisms: Impact on Human Diseases and Cancer
Vos, J. H. (1995) · Cited by 61 · see citing works
Visse, R., de Ruijter, M., Brouwer, J., Brandsma, J. A., & van de Putte, P. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(20)89491-5 · Cited by 61 · see citing works
Franklin, W. A., & Haseltine, W. A. (1984) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.81.12.3821 · Cited by 59 · see citing works
Zou, Y., Liu, T., Geacintov, N. E., & Houten, B. V. (1995) · Biochemistry · doi:10.1021/bi00041a038 · Cited by 59 · see citing works
Nucleic Acids and Molecular Biology
Eckstein, F., & Lilley, D. M. J. (1988) · Nucleic acids and molecular biology · doi:10.1007/978-3-642-83384-7 · Cited by 58 · see citing works
Enzyme-catalyzed DNA unwinding. Mechanism of action of helicase III.
Yarranton, G. T., Das, R. H., & Gefter, M. L. (1979) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)86418-9 · Cited by 57 · see citing works
Chambers, R. W., Śledziewska-Gójska, E., Hirani-Hojatti, S., & Borowy‐Borowski, H. (1985) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.82.21.7173 · Cited by 57 · see citing works
Chandrasekhar, D., & Houten, B. V. (2000) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/s0027-5107(00)00014-2 · Cited by 55 · see citing works
Localization of UvrA and Effect of DNA Damage on the Chromosome of Bacillus subtilis
Smith, B. T., Grossman, A. D., & Walker, G. C. (2002) · Journal of Bacteriology · doi:10.1128/jb.184.2.488-493.2002 · Cited by 53 · see citing works
Solution structure and DNA‐binding properties of the C‐terminal domain of UvrC from E.coli
Singh, S., Folkers, G. E., Bonvin, A. M. J. J., Boelens, R., Wechselberger, R. W., Niztayev, A., & Kaptein, R. (2002) · The EMBO Journal · doi:10.1093/emboj/cdf627 · Cited by 51 · see citing works
Characterization of the Escherichia coliDamage-independent UvrBC Endonuclease Activity
Moolenaar, G. F., Bazuine, M., van Knippenberg, I. C., Visse, R., & Goosen, N. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.52.34896 · Cited by 50 · see citing works
Myles, G. M., Houten, B. V., & Sancar, A. (1987) · Nucleic Acids Research · doi:10.1093/nar/15.3.1227 · Cited by 50 · see citing works
Zou, Y., Shell, S. M., Utzat, C. D., Luo, C., Yang, Z., Geacintov, N. E., & Basu, A. K. (2003) · Biochemistry · doi:10.1021/bi034446e · Cited by 48 · see citing works
Crystal structure of Escherichia coli UvrB C‐terminal domain, and a model for UvrB‐UvrC interaction
Sohi, M. K., Alexandrovich, A., Moolenaar, G. F., Visse, R., Goosen, N., Vernède, X., Fontecilla-Camps, J. C., Champness, J. N., & Sanderson, M. R. (2000) · FEBS Letters · doi:10.1016/s0014-5793(99)01690-7 · Cited by 48 · see citing works
Fuchs, R. P., & Seeberg, E. C. (1984) · The EMBO Journal · doi:10.1002/j.1460-2075.1984.tb01880.x · Cited by 48 · see citing works
uvr Genes function differently in repair of acetylaminofluorene and aminofluorene DNA adducts
Tang, M., Lieberman, M. W., & King, C. M. (1982) · Nature · doi:10.1038/299646a0 · Cited by 47 · see citing works
Bienstock, R. J., Škorvaga, M., Mandavilli, B. S., & Houten, B. V. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m210159200 · Cited by 47 · see citing works
Recognition and repair of the CC-1065-(N3-adenine)-DNA adduct by the UVRABC nucleases
Tang, M., Lee, C. S., Doisy, R. P., Ross, L., VanDevanter, D. R., & Hurley, L. H. (1988) · Biochemistry · doi:10.1021/bi00403a009 · Cited by 46 · see citing works
Selby, C. P., & Sancar, A. (1988) · Biochemistry · doi:10.1021/bi00419a004 · Cited by 45 · see citing works
The Role of ATP Binding and Hydrolysis by UvrB during Nucleotide Excision Repair
Moolenaar, G. F., Herron, M. F. P., Monaco, V., van der MAREL, G. A., van Boom, J. H., Visse, R., & Goosen, N. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.275.11.8044 · Cited by 44 · see citing works
Hierarchy of DNA Damage Recognition in Escherichia coli Nucleotide Excision Repair
Zou, Y., Luo, C., & Geacintov, N. E. (2001) · Biochemistry · doi:10.1021/bi001504c · Cited by 44 · see citing works
A cut above: Discovery of an alternative excision repair pathway in bacteria
Van Houten, B., Eisen, J. A., & Hanawalt, P. C. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.062062599 · Cited by 44 · see citing works
The Effect of the DNA Flanking the Lesion on Formation of the UvrB-DNA Preincision Complex
Moolenaar, G. F., Monaco, V., van der MAREL, G. A., van Boom, J. H., Visse, R., & Goosen, N. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.275.11.8038 · Cited by 44 · see citing works
Thomas, D. C., Kunkel, T. A., Casna, N. J., Ford, J. P., & Sancar, A. (1986) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)66897-8 · Cited by 43 · see citing works
Moolenaar, G. F., Franken, K. L. M. C., van de Putte, P., & Goosen, N. (1997) · Mutation Research/DNA Repair · doi:10.1016/s0921-8777(97)00042-6 · Cited by 43 · see citing works
Škorvaga, M., DellaVecchia, M. J., Croteau, D. L., Theis, K. W., Truglio, J. J., Mandavilli, B. S., Kisker, C., & Houten, B. V. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m409266200 · Cited by 43 · see citing works
Self-citationClaassen, L. A., & Grossman, L. I. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)99175-1 · Cited by 42 · see citing works
Gordienko, I., & Rupp, W. D. (1997) · The EMBO Journal · doi:10.1093/emboj/16.4.889 · Cited by 42 · see citing works
Jones, B. K., & Yeung, A. T. (1988) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.85.22.8410 · Cited by 41 · see citing works
The multiple roles for ATP in the Escherichia coli UvrABC endonuclease-catalyzed incision reaction.
Thiagalingam, S., & Grossman, L. I. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)46855-4 · Cited by 40 · see citing works
Verhoeven, E. E. A. (2002) · Nucleic Acids Research · doi:10.1093/nar/30.11.2492 · Cited by 39 · see citing works
Isolation and characterization of functional domains of UvrA
Myles, G. M., & Sancar, A. (1991) · Biochemistry · doi:10.1021/bi00230a005 · Cited by 38 · see citing works
Ziegel, R., Shallop, A. J., Upadhyaya, P., Jones, R. A., & Tretyakova, N. Y. (2003) · Biochemistry · doi:10.1021/bi035259j · Cited by 38 · see citing works
UvrABC incision of N-methylmitomycin A-DNA monoadducts and cross-links
Pu, W. T., Kahn, R., Munn, M. M., & Rupp, W. D. (1989) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)47119-6 · Cited by 36 · see citing works
E. coli uvrB protein binds to DNA in the presence of uvrA protein
Kacinski, B. M., & Rupp, W. D. (1981) · Nature · doi:10.1038/294480a0 · Cited by 36 · see citing works
Moolenaar, G. F., Uiterkamp, R. S., Zwijnenburg, D. A., & Goosen, N. (1998) · Nucleic Acids Research · doi:10.1093/nar/26.2.462 · Cited by 35 · see citing works
The repair of psoralen monoadducts by theEscherichia coliUvrABC endonuclease
Yeung, A. T., Jones, B. K., Capraro, M. A., & Chu, T. (1987) · Nucleic Acids Research · doi:10.1093/nar/15.12.4957 · Cited by 35 · see citing works
Lage, C. A. S., de Padula, M., de Alencar, T. A. M., Gonçalves, S. R. D. F., Vidal, L. S., Cabral-Neto, J. B., & Leitão, Á. C. (2003) · Mutation Research/Reviews in Mutation Research · doi:10.1016/j.mrrev.2003.06.003 · Cited by 35 · see citing works
Multiprotein Interactions in Strand Cleavage of DNA Damaged by UV and Chemicals
Seeberg, E. C. (1981) · Progress in nucleic acid research and molecular biology · doi:10.1016/s0079-6603(08)60406-7 · Cited by 34 · see citing works
Repair of aflatoxin B1 DNA adducts by the UvrABC endonuclease of Escherichia coli.
Oleykowski, C. A., Mayernik, J. A., Lim, S., Groopman, J. D., Grossman, L. I., Wogan, G. N., & Yeung, A. T. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)53055-6 · Cited by 34 · see citing works
Lambert, B., Jones, B. K., Roques, B. P., Pecq, J. B. L., & Yeung, A. T. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.17.6557 · Cited by 34 · see citing works
Sequence effect on incision by (A)BC excinuclease of 4NQO adducts and UV photoproducts
Thomas, D. C., Husain, I., Chaney, S. G., Panigrahi, G. B., & Walker, I. G. (1991) · Nucleic Acids Research · doi:10.1093/nar/19.2.365 · Cited by 33 · see citing works
Aßenmacher, N., Wenig, K., Lammens, A., & Hopfner, K. (2005) · Journal of Molecular Biology · doi:10.1016/j.jmb.2005.10.033 · Cited by 33 · see citing works
Popoff, S. C., Beck, D. J., & Rupp, W. D. (1987) · Mutation Research/DNA Repair Reports · doi:10.1016/0167-8817(87)90055-1 · Cited by 32 · see citing works
Involvement of a cryptic ATPase activity of UvrB and its proteolysis product, UvrB* in DNA repair
Caron, P. R., & Grossman, L. I. (1988) · Nucleic Acids Research · doi:10.1093/nar/16.22.10891 · Cited by 32 · see citing works
Two-dimensional NMR studies on the anthramycin-d(ATGCAT)2 adduct
Krugh, T. R., Graves, D. E., & Stone, M. P. (1989) · Biochemistry · doi:10.1021/bi00452a017 · Cited by 31 · see citing works
Initiation of the UvrABC nuclease cleavage reaction
Snowden, A., & Houten, B. V. (1991) · Journal of Molecular Biology · doi:10.1016/0022-2836(91)90378-j · Cited by 30 · see citing works
Pierce, J. R., Case, R., & Tang, M. (1989) · Biochemistry · doi:10.1021/bi00440a018 · Cited by 30 · see citing works
Lin, C. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.15.3151 · Cited by 30 · see citing works
Barre, F., Asseline, U., & Harel‐Bellan, A. (1999) · Journal of Molecular Biology · doi:10.1006/jmbi.1999.2550 · Cited by 30 · see citing works
A mutational study of the C-terminal zinc-finger motif of the Escherichia coli UvrA protein.
Wang, J., Mueller, K. L., & Grossman, L. I. (1994) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)34126-1 · Cited by 29 · see citing works
Visse, R., King, A., Moolenaar, G. F., Goosen, N., & van de Putte, P. (1994) · Biochemistry · doi:10.1021/bi00199a009 · Cited by 29 · see citing works
Repair of haloethylnitrosourea-induced DNA damage in mutant and adapted bacteria.
Bm, K., Wd, R., & Db, L. (1985) · PubMed · Cited by 28 · see citing works
Hoare, S., Zou, Y., Purohit, V., Krishnasamy, R., Škorvaga, M., Houten, B. V., Geacintov, N. E., & Basu, A. K. (2000) · Biochemistry · doi:10.1021/bi0013187 · Cited by 27 · see citing works
Munn, M. M., & Rupp, W. D. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)54293-9 · Cited by 26 · see citing works
Wang, J., & Grossman, L. I. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)53536-5 · Cited by 26 · see citing works
C5 Cytosine Methylation at CpG Sites Enhances Sequence Selectivity of Mitomycin C−DNA Bonding
LI, V. ‐., Reed, M., Zheng, Y., Kohn, H., & Tang, M.-S. (2000) · Biochemistry · doi:10.1021/bi991307h · Cited by 26 · see citing works
Domain Structure of Thermus thermophilus UvrB Protein
Nakagawa, N., Masui, R., Kato, R., & Kuramitsu, S. (1997) · Journal of Biological Chemistry · doi:10.1074/jbc.272.36.22703 · Cited by 26 · see citing works
Noncovalent drug-DNA binding interactions that inhibit and stimulate (A)BC excinuclease
Selby, C. P., & Sancar, A. (1991) · Biochemistry · doi:10.1021/bi00230a006 · Cited by 26 · see citing works
The Binding of UvrAB Proteins to Bubble and Loop Regions in Duplex DNA
Ahn, B., & Grossman, L. I. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.35.21462 · Cited by 26 · see citing works
Claassen, L., Ahn, B., Koo, H. S., & Grossman, L. I. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)99174-x · Cited by 25 · see citing works
The first zinc-binding domain of UvrA is not essential for UvrABC-mediated DNA excision repair
Visse, R., de Ruijter, M., Ubbink, M., Brandsma, J. A., & van de Putte, P. (1993) · Mutation Research/DNA Repair · doi:10.1016/0921-8777(93)90009-6 · Cited by 25 · see citing works
DNA Damage Recognition of Mutated Forms of UvrB Proteins in Nucleotide Excision Repair
Zou, Y., Ma, H., Minko, I. G., Shell, S. M., Yang, Z., Qu, Y., Xu, Y., Geacintov, N. E., & Lloyd, R. S. (2004) · Biochemistry · doi:10.1021/bi035992a · Cited by 25 · see citing works
Hydrophobic forces dominate the thermodynamic characteristics of UvrA-DNA damage interactions
Zou, Y., Bassett, H., Walker, R. K., Bishop, A., Amin, S., Geacintov, N. E., & Houten, B. V. (1998) · Journal of Molecular Biology · doi:10.1006/jmbi.1998.1903 · Cited by 24 · see citing works
Purmal, A. A., Rabow, L. E., Lampman, G. W., Cunningham, R. P., & Kow, Y. W. (1996) · Mutation Research/DNA Repair · doi:10.1016/s0921-8777(96)00032-8 · Cited by 23 · see citing works
Two Forms of UvrC Protein with Different Double-stranded DNA Binding Affinities
Tang, M.-S., Nazimiec, M. E., Ye, X., Iyer, G. H., Eveleigh, J., Zheng, Y., Zhou, W., & Tang, Y.-Y. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m008538200 · Cited by 23 · see citing works
Properties of a monoclonal antibody for the detection of abasic sites, a common DNA lesion
Chen, B.-X., Kubo, K., Ide, H., Erlanger, B. F., Wallace, S. S., & Kow, Y. W. (1992) · Mutation Research/DNA Repair · doi:10.1016/0921-8777(92)90087-j · Cited by 22 · see citing works
Oligomerization of the UvrB Nucleotide Excision Repair Protein of Escherichia coli
Hildebrand, E. L., & Grossman, L. I. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.39.27885 · Cited by 21 · see citing works
Effect of Bulky Lesions on DNA
Gómez‐Pinto, I., Cubero, E., Kalko, S. G., Monaco, V., MAREL, G. V. D., BOOM, J. H. V., Orozco, M., & González, C. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m311751200 · Cited by 21 · see citing works
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Caenorhabditis elegans: An Emerging Model in Biomedical and Environmental Toxicology
Leung, M. C. K., Williams, P. L., Benedetto, A., Au, C., Helmcke, K. J., Aschner, M., & Meyer, J. N. (2008) · Toxicological Sciences · doi:10.1093/toxsci/kfn121 · Cited by 1,027 · see citing works
The Human Gut Bacterial Genotoxin Colibactin Alkylates DNA
Wilson, M. R., Jiang, Y., Villalta, P. W., Stornetta, A., Boudreau, P. D., Carrá, A., Brennan, C. A., Chun, E., Ngo, L., Samson, L. D., et al. (2019) · Science · doi:10.1126/science.aar7785 · Cited by 635 · see citing works
DNA‐damage repair; the good, the bad, and the ugly
Hakem, R. (2008) · The EMBO Journal · doi:10.1038/emboj.2008.15 · Cited by 547 · see citing works
Eukaryotic nucleotide excision repair: from understanding mechanisms to influencing biology
Shuck, S. C., Short, E. A., & Turchi, J. J. (2008) · Cell Research · doi:10.1038/cr.2008.2 · Cited by 279 · see citing works
Biological Aspects in Food Preservation by Ultraviolet Light: a Review
Gayán, E., Condón, S., & Álvarez, I. (2013) · Food and Bioprocess Technology · doi:10.1007/s11947-013-1168-7 · Cited by 228 · see citing works
Repair of UV damage in bacteria
Goosen, N., & Moolenaar, G. F. (2007) · DNA repair · doi:10.1016/j.dnarep.2007.09.002 · Cited by 224 · see citing works
Click Nucleic Acid Ligation: Applications in Biology and Nanotechnology
El-Sagheer, A. H., & Brown, T. P. (2012) · Accounts of Chemical Research · doi:10.1021/ar200321n · Cited by 223 · see citing works
UvrD facilitates DNA repair by pulling RNA polymerase backwards
Epshtein, V., Kamarthapu, V., McGary, K., Svetlov, V. V., Ueberheide, B. M., Proshkin, S., Mironov, A. S., & Nudler, E. (2014) · Nature · doi:10.1038/nature12928 · Cited by 219 · see citing works
Schormann, N., Ricciardi, R. P., & Chattopadhyay, D. (2014) · Protein Science · doi:10.1002/pro.2554 · Cited by 203 · see citing works
Nair, D. R., Memmi, G., Hernández, D., Bard, J., Beaume, M. G., Gill, S. R., François, P., & Cheung, A. L. (2011) · Journal of Bacteriology · doi:10.1128/jb.00027-11 · Cited by 200 · see citing works
Prokaryotic Nucleotide Excision Repair
Kisker, C., Kuper, J., & Van Houten, B. (2013) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a012591 · Cited by 192 · see citing works
Self-citationRetroviral integrase superfamily: the structural perspective
Nowotny, M. (2009) · The EMBO Reports · doi:10.1038/embor.2008.256 · Cited by 183 · see citing works
Foster, P. L., Lee, H., Popodi, E. M., Townes, J. P., & Tang, H. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1512136112 · Cited by 171 · see citing works
Fuss, J. O., & Tainer, J. A. (2011) · DNA Repair · doi:10.1016/j.dnarep.2011.04.028 · Cited by 170 · see citing works
Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies
Kciuk, M., Marciniak, B., Mojzych, M., & Kontek, R. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21197264 · Cited by 168 · see citing works
Kad, N. M., Wang, H., Kennedy, G. G., Warshaw, D. M., & Houten, B. V. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.02.003 · Cited by 154 · see citing works
El-Sagheer, A. H., Sanzone, A. P., Gao, R., Tavassoli, A., & Brown, T. P. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1101519108 · Cited by 145 · see citing works
Structure and mechanism for DNA lesion recognition
Yang, W. (2007) · Cell Research · doi:10.1038/cr.2007.116 · Cited by 135 · see citing works
The interplay between DNA repair and autophagy in cancer therapy
Zhang, D., Tang, B., Xie, X., Xiao, Y., Yang, S., & Zhang, J. (2015) · Cancer Biology & Therapy · doi:10.1080/15384047.2015.1046022 · Cited by 131 · see citing works
Paradoxical DNA Repair and Peroxide Resistance Gene Conservation in Bacillus pumilus SAFR-032
Gioia, J., Yerrapragada, S., Qin, X., Jiang, H., Igboeli, O. C., Muzny, D. M., Dugan-Rocha, S., Ding, Y., Hawes, A. C., Liu, W., et al. (2007) · PLoS ONE · doi:10.1371/journal.pone.0000928 · Cited by 127 · see citing works
Bacterial Transcription as a Target for Antibacterial Drug Development
Ma, C., Yang, X., & Lewis, P. J. (2016) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00055-15 · Cited by 126 · see citing works
Kang, T.-H., Reardon, J. T., & Sancar, A. (2011) · Nucleic Acids Research · doi:10.1093/nar/gkq1318 · Cited by 124 · see citing works
ClpS1 Is a Conserved Substrate Selector for the Chloroplast Clp Protease System in Arabidopsis
Nishimura, K. J., Asakura, Y., Friso, G., Kim, J., Oh, S.-H., Rutschow, H. L., Ponnala, L., & van Wijk, K. J. (2013) · The Plant Cell · doi:10.1105/tpc.113.112557 · Cited by 119 · see citing works
XPA: A key scaffold for human nucleotide excision repair
Sugitani, N., Sivley, R. M., Perry, K. E., Capra, J. A., & Chazin, W. J. (2016) · DNA Repair · doi:10.1016/j.dnarep.2016.05.018 · Cited by 116 · see citing works
Excursions in polynuclear platinum DNA binding
Mangrum, J. B., & Farrell, N. P. (2010) · Chemical Communications · doi:10.1039/c0cc01254h · Cited by 109 · see citing works
Morita, R., Nakane, S., Shimada, A., Inoue, M., Iino, H., Wakamatsu, T., Fukui, K., Nakagawa, N., Masui, R., & Kuramitsu, S. (2010) · Journal of Nucleic Acids · doi:10.4061/2010/179594 · Cited by 107 · see citing works
PhyR Is Involved in the General Stress Response ofMethylobacterium extorquensAM1
Gourion, B., Francez‐Charlot, A., & Vorholt, J. A. (2007) · Journal of Bacteriology · doi:10.1128/jb.01483-07 · Cited by 102 · see citing works
Single-molecule imaging of UvrA and UvrB recruitment to DNA lesions in living Escherichia coli
Stracy, M., Jaciuk, M., Uphoff, S., Kapanidis, A. N., Nowotny, M., Sherratt, D. J., & Zawadzki, P. (2016) · Nature Communications · doi:10.1038/ncomms12568 · Cited by 95 · see citing works
Assembly of a biocompatible triazole-linked gene by one-pot click-DNA ligation
Kukwikila, M. N., Gale, N., El-Sagheer, A. H., Brown, T. P., & Tavassoli, A. (2017) · Nature Chemistry · doi:10.1038/nchem.2850 · Cited by 90 · see citing works
Mathieu, N., Kaczmarek, N., Rüthemann, P., Luch, A., & Naegeli, H. (2013) · Current Biology · doi:10.1016/j.cub.2012.12.032 · Cited by 89 · see citing works
The molecular mechanism of transcription-coupled DNA repair
Savery, N. J. (2007) · Trends in Microbiology · doi:10.1016/j.tim.2007.05.005 · Cited by 88 · see citing works
Pakotiprapha, D., Inuzuka, Y., Bowman, B. R., Moolenaar, G. F., Goosen, N., Jeruzalmi, D., & Verdine, G. L. (2008) · Molecular Cell · doi:10.1016/j.molcel.2007.10.026 · Cited by 85 · see citing works
Structure of UvrA nucleotide excision repair protein in complex with modified DNA
Jaciuk, M., Nowak, E., Skowronek, K. J., Tańska, A., & Nowotny, M. (2011) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.1973 · Cited by 85 · see citing works
Oxidative Stress Resistance in Porphyromonas Gingivalis
Henry, L. G., McKenzie, R. M. E., Robles, A. G., & Fletcher, H. M. (2012) · Future Microbiology · doi:10.2217/fmb.12.17 · Cited by 82 · see citing works
Molecular mechanisms and genomic maps of DNA excision repair in Escherichia coli and humans
Hu, J., Selby, C. P., Adar, S., Adebali, O., & Sancar, A. (2017) · Journal of Biological Chemistry · doi:10.1074/jbc.r117.807453 · Cited by 81 · see citing works
Anammox bacteria adapt to long-term light irradiation in photogranules
Kong, L., Zheng, R., Feng, Y., Du, W., Xie, C., Gu, Y., & Liu, S. (2023) · Water Research · doi:10.1016/j.watres.2023.120144 · Cited by 81 · see citing works
Repair of mitomycin C mono- and interstrand cross-linked DNA adducts by UvrABC: a new model
Weng, M.-W., Zheng, Y., Jasti, V. P., Champeil, É., Tomasz, M., Wang, Y., Basu, A. K., & Tang, M. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq576 · Cited by 77 · see citing works
Structure and mechanism of the UvrA–UvrB DNA damage sensor
Pakotiprapha, D., Samuels, M. A., Shen, K., Hu, J. H., & Jeruzalmi, D. (2012) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2240 · Cited by 77 · see citing works
Spore Photoproduct: A Key to Bacterial Eternal Life
Desnous, C., Guillaume, D. M., & Clivio, P. (2009) · Chemical Reviews · doi:10.1021/cr0781972 · Cited by 74 · see citing works
Genome-wide mapping of nucleotide excision repair with XR-seq
Hu, J., Li, W., Adebalı, O., Yang, Y., Oztas, O., Selby, C. P., & Sancar, A. (2018) · Nature Protocols · doi:10.1038/s41596-018-0093-7 · Cited by 71 · see citing works
Vaisman, A., McDonald, J. P., Huston, D., Kuban, W., Liu, L., Van Houten, B., & Woodgate, R. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003878 · Cited by 70 · see citing works
Reeves, D. A., Mu, H., Kropachev, K. Y., Cai, Y., Ding, S., Kolbanovskiy, A., Kolbanovskiy, M., Chen, Y., Krzeminski, J., Amin, S., et al. (2011) · Nucleic Acids Research · doi:10.1093/nar/gkr537 · Cited by 69 · see citing works
Weston, J. (2009) · Patai's chemistry of functional groups · doi:10.1002/9780470682531.pat0407 · Cited by 67 · see citing works
Escherichia coli ClbS is a colibactin resistance protein
Bossuet‐Greif, N., Dubois, D., Petit, C. R., Tronnet, S., Martín, P., Bonnet, R., Oswald, É., & Nougayrède, J. (2015) · Molecular Microbiology · doi:10.1111/mmi.13272 · Cited by 65 · see citing works
Rath, S., & Das, S. (2023) · Environmental Pollution · doi:10.1016/j.envpol.2023.122722 · Cited by 63 · see citing works
Surviving the Sun: Repair and bypass of DNA UV lesions
Yang, W. (2011) · Protein Science · doi:10.1002/pro.723 · Cited by 62 · see citing works
Cycles of light and dark co‐ordinate reversible colony differentiation in L isteria monocytogenes
Tiensuu, T., Andersson, C., Rydén, P., & Johansson, J. (2013) · Molecular Microbiology · doi:10.1111/mmi.12140 · Cited by 62 · see citing works
Nikolić, B., Mitić-Ćulafić, D., Vuković‐Gačić, B., & Knežević‐Vukčević, J. (2011) · Food and Chemical Toxicology · doi:10.1016/j.fct.2011.05.015 · Cited by 60 · see citing works
Abdelhaleem, M. M. (2009) · Methods in molecular biology · doi:10.1007/978-1-60327-355-8_1 · Cited by 59 · see citing works
Ott, E., Kawaguchi, Y., Kölbl, D., Rabbow, E., Rettberg, P., Mora, M., Moissl‐Eichinger, C., Weckwerth, W., Yamagishi, A., & Milojević, T. (2020) · Microbiome · doi:10.1186/s40168-020-00927-5 · Cited by 58 · see citing works
Kurth, D. G., Belfiore, C., Gorriti, M. F., Cortez, N., Farı́as, M. E., & Albarracín, V. H. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.00328 · Cited by 58 · see citing works
Lu, L., Yi, C., Jian, X., Zheng, G., & He, C. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq129 · Cited by 58 · see citing works
Manelytė, L., Guy, C. P., Smith, R. M., Dillingham, M. S., McGlynn, P., & Savery, N. J. (2009) · DNA repair · doi:10.1016/j.dnarep.2009.08.005 · Cited by 58 · see citing works
Apigenin Impacts the Growth of the Gut Microbiota and Alters the Gene Expression of Enterococcus
Wang, M., Firrman, J., Zhang, L., Arango-Argoty, G., Tomasula, P. M., Liu, L., Xiao, W., & Yam, K. L. (2017) · Molecules · doi:10.3390/molecules22081292 · Cited by 58 · see citing works
Tsutakawa, S. E., Tsai, C.-L., Yan, C., Bralić, A., Chazin, W., Hamdan, S. M., Schärer, O. D., Ivanov, I. N., & Tainer, J. A. (2020) · DNA repair · doi:10.1016/j.dnarep.2020.102972 · Cited by 58 · see citing works
Repair of Hydantoin Lesions and Their Amine Adducts in DNA by Base and Nucleotide Excision Repair
McKibbin, P. L., Fleming, A. M., Towheed, M. A., Houten, B. V., Burrows, C. J., & David, S. S. (2013) · Journal of the American Chemical Society · doi:10.1021/ja4059469 · Cited by 57 · see citing works
Regulation and Rate Enhancement during Transcription-Coupled DNA Repair
Manelytė, L., Kim, Y.-I. T., Smith, A. J., Smith, R. M., & Savery, N. J. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.11.012 · Cited by 57 · see citing works
Urquhart, A. S., Vogan, A. A., Gardiner, D. M., & Idnurm, A. (2023) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2214521120 · Cited by 57 · see citing works
DNA interstrand cross-links induced by ionizing radiation: An unsung lesion
Dextraze, M.-E., Gantchev, T. G., Girouard, S., & Hunting, D. J. (2010) · Mutation Research/Reviews in Mutation Research · doi:10.1016/j.mrrev.2009.12.007 · Cited by 56 · see citing works
Boyd, W. A., Crocker, T. L., Rodriguez, A. M., Leung, M. C. K., Lehmann, D. W., Freedman, J. H., Houten, B. V., & Meyer, J. N. (2009) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2009.10.008 · Cited by 54 · see citing works
Double-Strand Break Formation during Nucleotide Excision Repair of a DNA Interstrand Cross-Link
Sczepanski, J. T., Jacobs, A. C., Houten, B. V., & Greenberg, M. M. (2009) · Biochemistry · doi:10.1021/bi901006b · Cited by 54 · see citing works
Mechanisms of stationary-phase mutagenesis in bacteria: mutational processes in pseudomonads
Kivisaar, M. (2010) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.2010.02027.x · Cited by 52 · see citing works
Hughes, C. D., Wang, H., Ghodke, H. B., Simons, M., Towheed, A., Ye, P., Houten, B. V., & Kad, N. M. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt177 · Cited by 52 · see citing works
Characterization of the global impact of low temperature gas plasma on vegetative microorganisms
Winter, T., Winter, J., Polák, M., Kusch, K., Mäder, U., Sietmann, R., Ehlbeck, J., van Hijum, S. A. F. T., Weltmann, K., Hecker, M., et al. (2011) · PROTEOMICS · doi:10.1002/pmic.201000637 · Cited by 52 · see citing works
Towards an Informative Mutant Phenotype for Every Bacterial Gene
Deutschbauer, A. M., Price, M. N., Wetmore, K. M., Tarjan, D. R., Xu, Z., Shao, W., Leon, D., Arkin, A. P., & Skerker, J. M. (2014) · Journal of Bacteriology · doi:10.1128/jb.01836-14 · Cited by 51 · see citing works
A Structural Model for the Damage-sensing Complex in Bacterial Nucleotide Excision Repair
Pakotiprapha, D., Liu, Y., Verdine, G. L., & Jeruzalmi, D. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m900571200 · Cited by 51 · see citing works
Croteau, D. L., DellaVecchia, M. J., Wang, H., Bienstock, R. J., Melton, M. A., & Houten, B. V. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m603093200 · Cited by 51 · see citing works
Self-citationGupta, R. S. (2006) · BMC Genomics · doi:10.1186/1471-2164-7-167 · Cited by 51 · see citing works
Wang, H., Lü, M., Tang, M., Houten, B. V., Ross, J. B. A., Weinfeld, M., & Le, X. C. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0902281106 · Cited by 50 · see citing works
Rossi, F., Khanduja, J. S., Bortoluzzi, A., Houghton, J., Sander, P., Güthlein, C., Davis, E. O., Springer, B., Böttger, E. C., Relini, A., et al. (2011) · Nucleic Acids Research · doi:10.1093/nar/gkr271 · Cited by 50 · see citing works
Ferraris, D. M., Miggiano, R., Rossi, F., & Rizzi, M. (2018) · Pathogens · doi:10.3390/pathogens7010017 · Cited by 48 · see citing works
UV-induced DNA damage and repair: A cyanobacterial perspective
Pathak, J., Rajneesh, Singh, P. R., Häder, D. P., & Sinha, R. P. (2019) · Plant Gene · doi:10.1016/j.plgene.2019.100194 · Cited by 48 · see citing works
Liu, Y., Reeves, D. A., Kropachev, K. Y., Cai, Y., Ding, S., Kolbanovskiy, M., Kolbanovskiy, A., Bolton, J. L., Broyde, S. B., Houten, B. V., et al. (2011) · DNA repair · doi:10.1016/j.dnarep.2011.04.020 · Cited by 47 · see citing works
Malta, E., Moolenaar, G. F., & Goosen, N. (2007) · Biochemistry · doi:10.1021/bi7002235 · Cited by 47 · see citing works
Stalled transcription complexes promote DNA repair at a distance
Haines, N. M., Kim, Y.-I. T., Smith, A. J., & Savery, N. J. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1322350111 · Cited by 46 · see citing works
Jain, V., Hilton, B., Lin, B., Patnaik, S., Liang, F., Darian, E., Zou, Y., MacKerell, A. D., & Cho, B. P. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks1077 · Cited by 46 · see citing works
Timmins, J., Gordon, E. J., Caria, S., Leonard, G. A., Acajjaoui, S., Kuo, M.-S., Monchois, V., & McSweeney, S. M. (2009) · Structure · doi:10.1016/j.str.2009.02.008 · Cited by 46 · see citing works
Damage recognition in nucleotide excision DNA repair
Kuper, J., & Kisker, C. (2012) · Current Opinion in Structural Biology · doi:10.1016/j.sbi.2011.12.002 · Cited by 45 · see citing works
Self-citationSingle-nucleotide resolution dynamic repair maps of UV damage in Saccharomyces cerevisiae genome
Li, W., Adebalı, O., Yang, Y., Selby, C. P., & Sancar, A. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1801687115 · Cited by 45 · see citing works
Antarctic Relic Microbial Mat Community Revealed by Metagenomics and Metatranscriptomics
Zaikova, E., Goerlitz, D. S., Tighe, S. W., Wagner, N. Y., Bai, Y., Hall, B. L., Bevilacqua, J. G., Weng, M. M., Samuels-Fair, M. D., & Johnson, S. S. (2019) · Frontiers in Ecology and Evolution · doi:10.3389/fevo.2019.00001 · Cited by 45 · see citing works
Transcription coupled repair at the interface between transcription elongation and mRNP biogenesis
Gaillard, H., & Aguilera, A. (2012) · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · doi:10.1016/j.bbagrm.2012.09.008 · Cited by 44 · see citing works
Fukui, K., Nakagawa, N., Kitamura, Y., Nishida, Y., Masui, R., & Kuramitsu, S. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m806755200 · Cited by 44 · see citing works
Liu, X., Liu, S., Feng, Y., Liu, J., Chen, Y., Pham, K., Deng, H., Hirschi, K. D., Wang, X., & Cheng, N. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1306899110 · Cited by 43 · see citing works
Redefining the DNA-Binding Domain of Human XPA
Sugitani, N., Shell, S. M., Soss, S. E., & Chazin, W. (2014) · Journal of the American Chemical Society · doi:10.1021/ja503020f · Cited by 43 · see citing works
Cell damage repair mechanism in a desert green algae Chlorella sp. against UV-B radiation
Wang, B., Ye, T., Li, C., Li, X., Chen, L., & Wang, G. (2022) · Ecotoxicology and Environmental Safety · doi:10.1016/j.ecoenv.2022.113916 · Cited by 42 · see citing works
Genome analysis of DNA repair genes in the alpha proteobacterium Caulobacter crescentus
Martins-Pinheiro, M., Marques, R. C., & Menck, C. F. (2007) · BMC Microbiology · doi:10.1186/1471-2180-7-17 · Cited by 41 · see citing works
Jiang, Z., Mou, T., Sun, Y. Q., Su, J., Yu, L., & Zhang, Y. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1267771 · Cited by 41 · see citing works
Jain, V., Hilton, B., Patnaik, S., Zou, Y., Chiarelli, M. P., & Cho, B. P. (2012) · Nucleic Acids Research · doi:10.1093/nar/gkr1307 · Cited by 40 · see citing works
Archaeal DNA Repair Mechanisms
Marshall, C. J., & Santangelo, T. J. (2020) · Biomolecules · doi:10.3390/biom10111472 · Cited by 40 · see citing works
Antigenotoxic Potential of Some Dietary Non-phenolic Phytochemicals
Aprotosoaie, A. C., Luca, S. V., Trifan, A., & Miron, A. (2018) · Studies in natural products chemistry · doi:10.1016/b978-0-444-64181-6.00007-3 · Cited by 39 · see citing works
Kurthkoti, K., & Varshney, U. (2011) · Mechanisms of Ageing and Development · doi:10.1016/j.mad.2011.09.003 · Cited by 39 · see citing works
Gunka, K., Tholen, S., Gerwig, J., Herzberg, C., Stülke, J., & Commichau, F. M. (2011) · Journal of Bacteriology · doi:10.1128/jb.06470-11 · Cited by 39 · see citing works
Houghton, J., Townsend, C., Williams, A. R., Rodgers, A., Rand, L., Walker, K. B., Böttger, E. C., Springer, B., & Davis, E. O. (2012) · Journal of Bacteriology · doi:10.1128/jb.06654-11 · Cited by 39 · see citing works
Nucleotide Excision Repair of a DNA Interstrand Cross-Link Produces Single- and Double-Strand Breaks
Peng, X., Ghosh, A. K., Houten, B. V., & Greenberg, M. M. (2009) · Biochemistry · doi:10.1021/bi901603h · Cited by 38 · see citing works
Meneni, S. R., Shell, S. M., Gao, L., Jurečka, P., Lee, W., Šponer, J., Zou, Y., Chiarelli, M. P., & Cho, B. P. (2007) · Biochemistry · doi:10.1021/bi700858s · Cited by 38 · see citing works
Croteau, D. L., DellaVecchia, M. J., Perera, L., & Houten, B. V. (2008) · DNA repair · doi:10.1016/j.dnarep.2007.11.013 · Cited by 38 · see citing works
Self-citationSahbani, S. K., Girouard, S., Cloutier, P., Sanche, L., & Hunting, D. J. (2014) · Radiation Research · doi:10.1667/rr13450.1 · Cited by 38 · see citing works
Mazloum, N. A., Stegman, M. A., Croteau, D. L., Houten, B. V., Kwon, N. S., Ling, Y., Dickinson, C. E., Venugopal, A., Towheed, M. A., & Nathan, C. (2011) · Biochemistry · doi:10.1021/bi101674c · Cited by 38 · see citing works
Self-citationRegulation of DNA phosphorothioate modification in Salmonella enterica by DndB
He, W., Huang, T., Tang, Y., Liu, Y., Wu, X., Chen, S., Chan, W., Wang, Y., Liu, X., Chen, S., et al. (2015) · Scientific Reports · doi:10.1038/srep12368 · Cited by 37 · see citing works
Molecular insights on the biosynthesis of antitumour compounds by actinomycetes
Olano, C., Méndez, C., & Salas, J. A. (2010) · Microbial Biotechnology · doi:10.1111/j.1751-7915.2010.00231.x · Cited by 37 · see citing works
- Authors
- Truglio, J. J., Croteau, D. L., Van Houten, B., & Kisker, C.
- Affiliations
- National Institutes of Health (US)
- Department of Pharmacological Sciences, State University of New York at Stony Brook, Stony Brook, New York 11794-5115, Laboratory of Molecular Genetics, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina 27709, and Rudolf Virchow Center for Experimental Biomedicine, Institute for Structural Biology, University of Würzburg, Versbacher Str. 9, 97078 Würzburg, Germany
- Corresponding author
- Kisker, Caroline
- Venue
- Chemical Reviews
- Publisher
- American Chemical Society (ACS)
- Published
- 2006-01-28
- Volume
- 106
- Issue
- 2
- Pages
- 233-252
- ISSN
- 0009-2665 (ISSN-L)
- 1520-6890
- OpenAlex
- W2060583705
- Cited by
- 340
- References
- 224
- Citations by year
- 2026: 11 · 2025: 11 · 2024: 6 · 2023: 18 · 2022: 14 · 2021: 11 · 2020: 14 · 2019: 13 · 2018: 14 · 2017: 20 · 2016: 14 · 2015: 13 · 2014: 22 · 2013: 22 · 2012: 24
- FWCI
- 1.49
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Chemical Reviews (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA and Nucleic Acid Chemistry
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Keywords
- nucleotide excision repair, uvrA, UvrB, UvrC, DNA damage recognition, DNA damage tolerance, UV-induced DNA damage, translesion synthesis, DNA repair proteins, Escherichia coli, Saccharomyces cerevisiae, DNA glycosylase, DNA helicase
- MeSH terms
- Animals, Bacterial Proteins, DNA Damage, DNA Repair, DNA, Bacterial, Endodeoxyribonucleases, Humans, Nucleic Acid Conformation, Escherichia coli Proteins
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