Copper–zinc superoxide dismutase: Why not pH-dependent?
Abstract
Copper−zinc superoxide dismutase (CuZnSOD) catalyzes the disproportionation of superoxide to hydrogen peroxide and dioxygen at diffusion controlled rates. Previous mechanistic studies have focused on the dramatic electrostatic guidance mechanism by which superoxide is drawn into the active site of this enzyme. Another striking but less understood feature of this enzyme is its ability to dismutate superoxide over a wide range of pH (5−9.5) without any change in rate-determining step or structural changes at the active site copper. To investigate the explanation for this pH independence, we have redetermined the rate of superoxide disproportionation, k cat, catalyzed by the zinc-deficient form (Cu-apoSOD) of the enzyme as a function of pH and have found that it is pH-dependent, in contrast to the native enzyme, even under conditions in which the copper ion does not leave the native copper-binding site. In addition, we have determined the rate of reduction, k 1, of Cu-apoSOD by superoxide and have found that this step of the catalytic cycle is pH-independent. We conclude that the reoxidation rate, k 2, of the catalytic cycle is pH-dependent for Cu-apoSOD. These results have led us to propose that the key role of the zinc and of the histidyl imidazolate that bridges copper and zinc in CuZnSOD is to aid in the rapid dissociation of the product peroxide.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
A detailed examination of the first reaction using a pulse radiolysis technique showed that the enzymatic reduction and oxidation of superoxide were independent of pH. However, the second reaction was pH-dependent.
“A detailed examination of the first reaction using a pulse radiolysis technique showed that the enzymatic reduction and oxidation of superoxide were independent of pH. However, the second reaction was pH-dependent [78].”
From Superoxide Anion Chemistry—Its Role at the Core of the Innate Immunity (2023) · cites this paper as [78]
Cites
Superoxide radical and superoxide dismutases
Fridovich, I. (1995) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.64.070195.000525 · Cited by 3,455 · see citing works
Determination and analysis of the 2 Å structure of copper, zinc superoxide dismutase
Tainer, J. A., Getzoff, E. D., Beem, K. M., Richardson, J. S., & Richardson, D. C. (1982) · Journal of Molecular Biology · doi:10.1016/0022-2836(82)90174-7 · Cited by 948 · see citing works
Electrostatic recognition between superoxide and copper, zinc superoxide dismutase
Getzoff, E. D., Tainer, J. A., Weiner, P. K., Kollman, P. A., Richardson, J. S., & Richardson, D. C. (1983) · Nature · doi:10.1038/306287a0 · Cited by 554 · see citing works
Faster superoxide dismutase mutants designed by enhancing electrostatic guidance
Getzoff, E. D., Cabelli, D. E., Fisher, C. L., Parge, H. E., Viezzoli, M. S., Banci, L., & Hallewell, R. A. (1992) · Nature · doi:10.1038/358347a0 · Cited by 399 · see citing works
Self-citationFielden, E. M., Roberts, P. B., Bray, R. C., et al. (1974) · Biochemical Journal · doi:10.1042/bj1390049 · Cited by 353 · see citing works
Molecular cloning of cDNAs encoding a guanine-nucleotide-releasing factor for Ras p21
Shou, C., Farnsworth, C. L., Neel, B. G., & Feig, L. A. (1992) · Nature · doi:10.1038/358351a0 · Cited by 353 · see citing works
Klug-Roth, D., Fridovich, I., & Rabani, J. (1973) · Journal of the American Chemical Society · doi:10.1021/ja00790a007 · Cited by 251 · see citing works
Cabelli, D. E., & Bielski, B. H. J. (1983) · The Journal of Physical Chemistry · doi:10.1021/j100233a031 · Cited by 242 · see citing works
Self-citationElectrostatic interactions in the reaction mechanism of bovine erythrocyte superoxide dismutase
Cudd, A., & Fridovich, I. (1982) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)33779-7 · Cited by 211 · see citing works
Spectroscopic studies on Cu2Zn2SOD: a continuous advancement of investigation tools
Bertini, I., Banci, L., Piccioli, M., et al. (1990) · Coordination Chemistry Reviews · doi:10.1016/0010-8545(90)85005-d · Cited by 115 · see citing works
Metal sites of copper proteins. Ligands of copper in hemocuprein
Rotilio, G., Agrò, A. F., Calabrese, L., et al. (1971) · Biochemistry · doi:10.1021/bi00780a011 · Cited by 110 · see citing works
Crystal Structure of Reduced Bovine Erythrocyte Superoxide Dismutase at 1.9 Å Resolution
Rypniewski, W. R., Mangani, S., Bruni, B., Orioli, P. L., Casati, M., & Wilson, K. S. (1995) · Journal of Molecular Biology · doi:10.1006/jmbi.1995.0434 · Cited by 86 · see citing works
Intramolecular binding of nitrogen bases to a cofacial binuclear copper(II) complex
Maverick, A. W., Ivie, M. L., Waggenspack, J. H., et al. (1990) · Inorganic Chemistry · doi:10.1021/ic00338a005 · Cited by 68 · see citing works
EXAFS and near-edge structure in the cobalt K-edge absorption spectra of metal carbonyl complexes
Binsted, N., Cook, S. L., Evans, J., et al. (1987) · Journal of the American Chemical Society · doi:10.1021/ja00246a025 · Cited by 65 · see citing works
Banci, L., Bertini, I., Cabelli, D. E., et al. (1991) · European Journal of Biochemistry · doi:10.1111/j.1432-1033.1991.tb15794.x · Cited by 60 · see citing works
Self-citationPantoliano, M. W. (1982) · Journal of Inorganic Biochemistry · doi:10.1016/s0162-0134(00)80093-8 · Cited by 50 · see citing works
Interaction between copper(II)-arginine complexes and HO2/O2- radicals, a pulse radiolysis study
Cabelli, D. E., Bielski, B. H. J., & Holcman, J. (1987) · Journal of the American Chemical Society · doi:10.1021/ja00246a024 · Cited by 44 · see citing works
Self-citationPark, J. Y., Slagle, I. R., & Gutman, D. (1983) · The Journal of Physical Chemistry · doi:10.1021/j100233a032 · Cited by 43 · see citing works
Stability constants of N-methyl- and N-ethyl-substituted diethylenetriamine complexes of copper(II)
Allison, J. W., & Angelici, R. J. (1971) · Inorganic Chemistry · doi:10.1021/ic50104a029 · Cited by 40 · see citing works
Polticelli, F., Bottaro, G., Battistoni, A., Carrı̀, M. T., Djinović‐Carugo, K., Bolognesi, M., O'Neill, P., Rotilio, G., & Desideri, A. (1995) · Biochemistry · doi:10.1021/bi00018a006 · Cited by 39 · see citing works
Banci, L., Bertini, I., Bruni, B., Carloni, P., Luchinat, C., Mangani, S., Orioli, P., Piccioli, M., Ripniewski, W., & Wilson, K. S. (1994) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1994.2040 · Cited by 35 · see citing works
Viglino, P., Rigo, A., Argese, E., et al. (1981) · Biochemical and Biophysical Research Communications · doi:10.1016/s0006-291x(81)80072-1 · Cited by 30 · see citing works
Resolution and identification of iron-containing antigens in membrane vesicles from Escherichia coli
Owen, P., Kaczorowski, G. J., & Kaback, H. R. (1980) · Biochemistry · doi:10.1021/bi00544a032 · Cited by 29 · see citing works
Cyanide binding to Cu, Zn superoxide dismutase. An NMR study of the Cu(II), Co(II) derivative.
Paci, M., Desideri, A., & Rotilio, G. (1988) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)57373-2 · Cited by 26 · see citing works
Cudd, A., & Fridovich, I. (1982) · FEBS Letters · doi:10.1016/0014-5793(82)80596-6 · Cited by 16 · see citing works
Expression of Klebsiella nitrogen fixation genes in Azotobacter—a caution
Cannon, F. C., & Postgate, J. R. (1983) · Nature · doi:10.1038/306290a0 · Cited by 16 · see citing works
Felix, K., Lengfelder, E., Deters, D., et al. (1993) · BioMetals · doi:10.1007/bf00154227 · Cited by 15 · see citing works
Graden, J. A., Ellerby, L., Roe, J. A., et al. (1994) · Journal of the American Chemical Society · doi:10.1021/ja00100a047 · Cited by 15 · see citing works
Self-citationSpectroscopic studies of the type 2 and type 3 copper centres in the mercury derivative of laccase
Tamilarasan, R., & McMillin, D. R. (1989) · Biochemical Journal · doi:10.1042/bj2630425 · Cited by 13 · see citing works
Zinc Deficient Bovine Erythrocyte Superoxide Dismutase Has Low Specific Activity.
Hirose, J., Hiroyuki, K. A. N. O., Kidani, Y., et al. (1992) · Chemical and Pharmaceutical Bulletin · doi:10.1248/cpb.40.506 · Cited by 5 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Superoxide dismutases and superoxide reductases
Sheng, Y., Abreu, I. A., Cabelli, D. E., Maroney, M. J., Miller, A.-F., Teixeira, M., & Valentine, J. S. (2014) · Chemical Reviews · doi:10.1021/cr4005296 · Cited by 1,081 · see citing works
Self-citationSuperoxide dismutases—A review of the metal-associated mechanistic variations
Abreu, I. A., & Cabelli, D. E. (2010) · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics · doi:10.1016/j.bbapap.2009.11.005 · Cited by 563 · see citing works
Self-citationSuperoxide Anion Chemistry—Its Role at the Core of the Innate Immunity
Andrés, C. M. C., Pérez de la Lastra, J. M., Andrés Juan, C., Plou, F. J., & Pérez-Lebeña, E. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24031841 · Cited by 342 · see citing works
Aggregation of Copper–Zinc Superoxide Dismutase in Familial and Sporadic ALS
Chattopadhyay, M., & Valentine, J. S. (2009) · Antioxidants & Redox Signaling · doi:10.1089/ars.2009.2536 · Cited by 163 · see citing works
Self-citationVincent, A., Thauvin, M., Quévrain, E., Mathieu, E., Layani, S., Seksik, P., Batinic-Haberle, I., Vriz, S., Policar, C., & Delsuc, N. (2021) · Journal of Inorganic Biochemistry · doi:10.1016/j.jinorgbio.2021.111431 · Cited by 58 · see citing works
Copper-only superoxide dismutase enzymes and iron starvation stress in Candida fungal pathogens
Schatzman, S. S., Peterson, R. L., Teka, M., He, B., Cabelli, D. E., Cormack, B. P., & Culotta, V. C. (2020) · Journal of Biological Chemistry · doi:10.1074/jbc.ra119.011084 · Cited by 54 · see citing works
Self-citation
- Authors
- Ellerby, L. M., Cabelli, D. E., Graden, J. A., & Valentine, J. S.
- Affiliations
- University of California, Los Angeles (US)
- Venue
- Journal of the American Chemical Society
- Publisher
- American Chemical Society (ACS)
- Published
- 1996-01-01
- Volume
- 118
- Issue
- 28
- Pages
- 6556-6561
- ISSN
- 0002-7863 (ISSN-L)
- 1520-5126
- OpenAlex
- W2067888080
- Cited by
- 184
- References
- 30
- Citations by year
- 2026: 3 · 2025: 8 · 2024: 3 · 2023: 5 · 2022: 6 · 2021: 8 · 2020: 9 · 2019: 6 · 2018: 9 · 2017: 3 · 2016: 4 · 2015: 4 · 2014: 8 · 2013: 6 · 2012: 9
- FWCI
- 3.38
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Journal of the American Chemical Society (publishedVersion)
- Funders
- U.S. Department of Energy
- National Institutes of Health
- Brookhaven National Laboratory
- Topics
- Physical Sciences › Chemistry › Inorganic Chemistry › Metal-Catalyzed Oxygenation Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Glutathione Transferases and Polymorphisms
- Physical Sciences › Chemistry › Organic Chemistry › Chemical Reaction Mechanisms
- Keywords
- copper-zinc superoxide dismutase, superoxide disproportionation, pH dependence, enzyme mechanism
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review