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Cited by 371

The DOI matches its Crossref record; 57 of the 57 references it cites were found in a registry or an index.

Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community

Open access
Hemme, Christopher L, Deng, Ye, Gentry, Terry J, Fields, Matthew W, Wu, Liyou, Barua, Soumitra, Barry, Kerrie, Tringe, Susannah G, Watson, David B, He, Zhili, Hazen, Terry C, Tiedje, James M, Rubin, Edward M, Zhou, Jizhong·2010·The ISME Journal

Abstract

Understanding adaptation of biological communities to environmental change is a central issue in ecology and evolution. Metagenomic analysis of a stressed groundwater microbial community reveals that prolonged exposure to high concentrations of heavy metals, nitric acid and organic solvents (∼50 years) has resulted in a massive decrease in species and allelic diversity as well as a significant loss of metabolic diversity. Although the surviving microbial community possesses all metabolic pathways necessary for survival and growth in such an extreme environment, its structure is very simple, primarily composed of clonal denitrifying γ- and β-proteobacterial populations. The resulting community is overabundant in key genes conferring resistance to specific stresses including nitrate, heavy metals and acetone. Evolutionary analysis indicates that lateral gene transfer could have a key function in rapid response and adaptation to environmental contamination. The results presented in this study have important implications in understanding, assessing and predicting the impacts of human-induced activities on microbial communities ranging from human health to agriculture to environmental management, and their responses to environmental changes.

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Crossref · 10.1038/ismej.2009.154

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Metadata

Authors
Hemme, C. L., Deng, Y., Gentry, T. J., Fields, M. W., Wu, L., Barua, S., Barry, K., Tringe, S. G., Watson, D. B., He, Z., Hazen, T. C., Tiedje, J. M., Rubin, E. M., & Zhou, J.
Venue
The ISME Journal
Published
2010-02-25
Volume
4
Issue
5
Pages
660-672
ISSN
  • 1751-7362 (ISSN-L)
  • 1751-7370
OpenAlex
W2154988926
Cited by
371
References
57
FWCI
15.96
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community. https://app.cochat.ai/papers/10.1038/ismej.2009.154
The paper
Hemme, C. L., Deng, Y., Gentry, T. J., Fields, M. W., Wu, L., Barua, S., Barry, K., Tringe, S. G., Watson, D. B., He, Z., Hazen, T. C., Tiedje, J. M., Rubin, E. M., & Zhou, J. (2010). Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community. The ISME Journal. https://doi.org/10.1038/ismej.2009.154

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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.