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Functional asymmetry in Caenorhabditis elegans taste neurons and its computational role in chemotaxis
Open accessAbstract
Chemotaxis in Caenorhabditis elegans, like chemotaxis in bacteria, involves a random walk biased by the time derivative of attractant concentration, but how the derivative is computed is unknown. Laser ablations have shown that the strongest deficits in chemotaxis to salts are obtained when the ASE chemosensory neurons (ASEL and ASER) are ablated, indicating that this pair has a dominant role. Although these neurons are left–right homologues anatomically, they exhibit marked asymmetries in gene expression and ion preference. Here, using optical recordings of calcium concentration in ASE neurons in intact animals, we demonstrate an additional asymmetry: ASEL is an ON-cell, stimulated by increases in NaCl concentration, whereas ASER is an OFF-cell, stimulated by decreases in NaCl concentration. Both responses are reliable yet transient, indicating that ASE neurons report changes in concentration rather than absolute levels. Recordings from synaptic and sensory transduction mutants show that the ON–OFF asymmetry is the result of intrinsic differences between ASE neurons. Unilateral activation experiments indicate that the asymmetry extends to the level of behavioural output: ASEL lengthens bouts of forward locomotion (runs) whereas ASER promotes direction changes (turns). Notably, the input and output asymmetries of ASE neurons are precisely those of a simple yet novel neuronal motif for computing the time derivative of chemosensory information, which is the fundamental computation of C. elegans chemotaxis. Evidence for ON and OFF cells in other chemosensory networks suggests that this motif may be common in animals that navigate by taste and smell.
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“This is similar to what has been observed in ASE [69].”
From Connecting a Connectome to Behavior: An Ensemble of Neuroanatomical Models of C. elegans Klinotaxis (2013) · cites this paper as [69]
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“Changes in salt concentration were encoded by ON and OFF chemosensory cells [69] using an instantaneous function of a derivative operator applied to the recent history of attractant concentration [94]:”
From Connecting a Connectome to Behavior: An Ensemble of Neuroanatomical Models of C. elegans Klinotaxis (2013) · cites this paper as [69]
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Cites
Fluorescent indicators for Ca2+based on green fluorescent proteins and calmodulin
Miyawaki, A., Llopis, J. L., Heim, R., McCaffery, J. M., Adams, J. A., Ikura, M., & Tsien, R. Y. (1997) · Nature · doi:10.1038/42264 · Cited by 3,250
A circuit for navigation in Caenorhabditis elegans
Gray, J. M., Hill, J. J., & Bargmann, C. I. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0409009101 · Cited by 811
Bargmann, C. I., & Horvitz, H. R. (1991) · Neuron · doi:10.1016/0896-6273(91)90276-6 · Cited by 740
Odor Coding in the Drosophila Antenna
de Bruyne, M., Foster, K., & Carlson, J. R. (2001) · Neuron · doi:10.1016/s0896-6273(01)00289-6 · Cited by 732
Dissecting a circuit for olfactory behaviour in Caenorhabditis elegans
Chalasani, S. H., Chronis, N., Tsunozaki, M., Gray, J. M., Ramot, D., Goodman, M. B., & Bargmann, C. I. (2007) · Nature · doi:10.1038/nature06292 · Cited by 630
UNC-13 is required for synaptic vesicle fusion in C. elegans
Richmond, J. E., Davis, W. S., & Jørgensen, E. M. (1999) · Nature Neuroscience · doi:10.1038/14755 · Cited by 617
The Fundamental Role of Pirouettes in Caenorhabditis elegans Chemotaxis
Pierce-Shimomura, J. T., Morse, T. M., & Lockery, S. R. (1999) · Journal of Neuroscience · doi:10.1523/jneurosci.19-21-09557.1999 · Cited by 536
Self-citationTemporal comparisons in bacterial chemotaxis.
Segall, J. E., Block, S. M., & Berg, H. C. (1986) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.83.23.8987 · Cited by 497
Tobin, D. M., Madsen, D. M., Kahn-Kirby, A. H., Peckol, E. L., Moulder, G. L., Barstead, R. J., Maricq, A. V., & Bargmann, C. I. (2002) · Neuron · doi:10.1016/s0896-6273(02)00757-2 · Cited by 455
Komatsu, H., Mori, I., Rhee, J.-S., Akaike, N., & Ohshima, Y. (1996) · Neuron · doi:10.1016/s0896-6273(00)80202-0 · Cited by 445
Coburn, C. M., & Bargmann, C. I. (1996) · Neuron · doi:10.1016/s0896-6273(00)80201-9 · Cited by 441
Guanylyl cyclase expression in specific sensory neurons: A new family of chemosensory receptors
Yu, S. S. B., Avery, L., Baude, E. J., & Garbers, D. L. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.7.3384 · Cited by 430
Optical Imaging of Calcium Transients in Neurons and Pharyngeal Muscle of C. elegans
Kerr, R. A., Lev‐Ram, V., Baird, G., Vincent, P., Tsien, R. Y., & Schafer, W. R. (2000) · Neuron · doi:10.1016/s0896-6273(00)81196-4 · Cited by 407
Self-citationThe ON and OFF channels of the visual system
Schiller, P. H. (1992) · Trends in Neurosciences · doi:10.1016/0166-2236(92)90017-3 · Cited by 365
Dopamine and Glutamate Control Area-Restricted Search Behavior in Caenorhabditis elegans
Hills, T. T., Brockie, P. J., & Maricq, A. V. (2004) · Journal of Neuroscience · doi:10.1523/jneurosci.1569-03.2004 · Cited by 356
Speese, S., Petrie, M., Schuske, K., Ailion, M., Ann, K., Iwasaki, K., Jorgensen, E. M., & Martin, T. F. J. (2007) · Journal of Neuroscience · doi:10.1523/jneurosci.1466-07.2007 · Cited by 333
Chapter 10 Laser Killing of Cells in Caenorhabditis elegans
Bargmann, C. I., & Avery, L. (1995) · Methods in cell biology · doi:10.1016/s0091-679x(08)61390-4 · Cited by 306
Synaptic Transmission Deficits inCaenorhabditis elegansSynaptobrevin Mutants
Nonet, M. L., Saifee, O., Zhao, H., Rand, J. B., & Wei, L. (1998) · Journal of Neuroscience · doi:10.1523/jneurosci.18-01-00070.1998 · Cited by 283
MicroRNAs acting in a double-negative feedback loop to control a neuronal cell fate decision
Johnston, R. J., Chang, S., Etchberger, J. F., Ortiz, C. O., & Hobert, O. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0505530102 · Cited by 276
The Cyclic GMP-Dependent Protein Kinase EGL-4 Regulates Olfactory Adaptation in C. elegans
L’Étoile, N. D., Coburn, C. M., Eastham, J., Kistler, A. L., Gallegos, G., & Bargmann, C. I. (2002) · Neuron · doi:10.1016/s0896-6273(02)01066-8 · Cited by 202
Drosophila hygrosensation requires the TRP channels water witch and nanchung
Liu, L., Li, Y., Wang, R., Yin, C., Dong, Q., Hing, H. K., Kim, C., & Welsh, M. J. (2007) · Nature · doi:10.1038/nature06223 · Cited by 200
The homeobox gene lim-6 is required for distinct chemosensory representations in C. elegans
Pierce-Shimomura, J. T., Faumont, S., Gaston, M. R., Pearson, B. J., & Lockery, S. R. (2001) · Nature · doi:10.1038/35070575 · Cited by 193
Self-citationStep-Response Analysis of Chemotaxis inCaenorhabditis elegans
Miller, A. C., Thiele, T. R., Faumont, S., Moravec, M. L., & Lockery, S. R. (2005) · Journal of Neuroscience · doi:10.1523/jneurosci.5133-04.2005 · Cited by 105
Self-citationDaniels, S. A., Ailion, M., Thomas, J. H., & Sengupta, P. (2000) · Genetics · doi:10.1093/genetics/156.1.123 · Cited by 105
Cyclic GMP-dependent protein kinase EGL-4 controls body size and lifespan inC. elegans
Hirose, T., Nakano, Y., Nagamatsu, Y., Misumi, T., Ohta, H., & Ohshima, Y. (2003) · Development · doi:10.1242/dev.00330 · Cited by 101
Inhibition of lobster olfactory receptor cells by an odor-activated potassium conductance
Michel, W. C., McClintock, T. S., & Ache, B. W. (1991) · Journal of Neurophysiology · doi:10.1152/jn.1991.65.3.446 · Cited by 88
Responses of the nematodeCaenorhabditis elegans to controlled chemical stimulation
Dusenbery, D. B. (1980) · Journal of Comparative Physiology A · doi:10.1007/bf00657352 · Cited by 81
Response properties of rat olfactory bulb neurones
Mair, R. G. (1982) · The Journal of Physiology · doi:10.1113/jphysiol.1982.sp014197 · Cited by 57
‘On’- and ‘Off’- Responses of the Olfactory Epithelium
Takagi, S., & SHIBUYA, T. (1959) · Nature · doi:10.1038/184060a0 · Cited by 39
Chemosensory behavior of semi-restrainedCaenorhabditis elegans
Faumont, S., Miller, A. C., & Lockery, S. R. (2005) · Journal of Neurobiology · doi:10.1002/neu.20196 · Cited by 30
Self-citationHinterwirth, A. J., Zeiner, R., & Tichy, H. (2004) · European Journal of Neuroscience · doi:10.1111/j.0953-816x.2004.03386.x · Cited by 23
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Research works printed but not linked: 1
- Winer, B. J., Brown, D. R. & Michels, K. M. Statistica Principles in Experimental Design 3rd ed. 354–358 (McGraw-Hill, Boston, 1991)
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Güntürkün, O., Ströckens, F., & Ocklenburg, S. (2020) · Physiological Reviews · doi:10.1152/physrev.00006.2019 · Cited by 412
A hub-and-spoke circuit drives pheromone attraction and social behaviour in C. elegans
Macosko, E. Z., Pokala, N., Feinberg, E. H., Chalasani, S. H., Butcher, R. A., Clardy, J., & Bargmann, C. I. (2009) · Nature · doi:10.1038/nature07886 · Cited by 475
Left–right asymmetries of behaviour and nervous system in invertebrates
Frasnelli, E., Vallortígara, G., & Rogers, L. J. (2012) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2012.02.006 · Cited by 351
NeuroPAL: A Multicolor Atlas for Whole-Brain Neuronal Identification in C. elegans
Yemini, E., Lin, A., Nejatbakhsh, A., Varol, E., Sun, R., Mena, G. E., Samuel, A. D. T., Paninski, L., Venkatachalam, V., & Hobert, O. (2020) · Cell · doi:10.1016/j.cell.2020.12.012 · Cited by 310
Neurons Detect Increases and Decreases in Oxygen Levels Using Distinct Guanylate Cyclases
Zimmer, M., Gray, J. M., Pokala, N., Chang, A. J., Karow, D. S., Marletta, M. A., Hudson, M. L., Morton, D. B., Chronis, N., & Bargmann, C. I. (2009) · Neuron · doi:10.1016/j.neuron.2009.02.013 · Cited by 285
Metadata
- Authors
- Suzuki, H., Thiele, T. R., Faumont, S., Ezcurra, M., Lockery, S. R., & Schafer, W. R.
- Affiliations
- University of California San Diego (US)
- University of Oregon (US)
- MRC Laboratory of Molecular Biology (GB)
- Corresponding author
- Lockery, Shawn R.
- Venue
- Nature
- Published
- 2008-07
- Volume
- 454
- Issue
- 7200
- Pages
- 114-117
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC2984562
- OpenAlex
- W2003026101
- Semantic Scholar
- 3c75c57d74fd5e24be78ea6c1d61e14ec4c6194f
- Cited by
- 256
- References
- 31
- Citations by year
- 2026: 10 · 2025: 25 · 2024: 15 · 2023: 10 · 2022: 10 · 2021: 16 · 2020: 11 · 2019: 10 · 2018: 14 · 2017: 12 · 2016: 12 · 2015: 22 · 2014: 13 · 2013: 14 · 2012: 10
- FWCI
- 7.35
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Funders
- National Institute of Mental Health (R21MH112105, MH051383, R29MH051383, R01MH051383)
- National Institute on Drug Abuse (R01DA016445, DA016445)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neurobiology and Insect Physiology Research
- Life Sciences › Neuroscience › Sensory Systems › Ion Channels and Receptors
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Aging › Genetics, Aging, and Longevity in Model Organisms
- Keywords
- Caenorhabditis elegans, chemotaxis, salty taste, ASER, forward locomotion, turning behavior, calcium imaging, chemotaxis mutants, bilateral asymmetry, retinal organization
- MeSH terms
- Animals, Bacterial Proteins, Chemoreceptor Cells, Chemotaxis, Mutation, Neurons, Afferent, Sodium Chloride, Synapses, Taste, Signal Transduction, Caenorhabditis elegans
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