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Mendelian randomization: Using genes as instruments for making causal inferences in epidemiology

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DNA methylation arrays as surrogate measures of cell mixture distribution

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Mepolizumab for severe eosinophilic asthma (DREAM): a multicentre, double-blind, placebo-controlled trial

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A Large-Scale, Consortium-Based Genomewide Association Study of Asthma

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Fast and accurate genotype imputation in genome-wide association studies through pre-phasing

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Genetic variants regulating ORMDL3 expression contribute to the risk of childhood asthma

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DNA methylation profiling of human chromosomes 6, 20 and 22

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Differential DNA Methylation in Purified Human Blood Cells: Implications for Cell Lineage and Studies on Disease Susceptibility

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Role of IL-13 Genetic Variants in Signalling of Asthma

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Biosynthetic Enzymes of Membrane Glycerophospholipid Diversity as Therapeutic Targets for Drug Development

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Merged Affinity Network Association Clustering: Joint multi-omic/clinical clustering to identify disease endotypes

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Epigenetic regulation of pediatric and neonatal immune responses

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ROLE OF MICRORNA AND POLYMORPHISMS OF FOXP3 AND ADRB2 GENES IN PATHOGENESIS OF PULMONARY DISEASES

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Does epigenetics play a role in human asthma?

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Clinical approaches towards asthma and chronic obstructive pulmonary disease based on the heterogeneity of disease pathogenesis

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Uncovering the Role of the Methylome in Dementia and Neurodegeneration

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Epigenomics and Transcriptomics in the Prediction and Diagnosis of Childhood Asthma: Are We There Yet?

Forno, E., & Celedon, J. C. (2019) · Frontiers in Pediatrics · doi:10.3389/fped.2019.00115 · Cited by 30

Teaching 'big data' analysis to young immunologists

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Replicated methylation changes associated with eczema herpeticum and allergic response

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Precision Medicine in Targeted Therapies for Severe Asthma: Is There Any Place for “Omics” Technology?

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A history into genetic and epigenetic evolution of food tolerance: how humanity rapidly evolved by drinking milk and eating wheat

Blanchard, C. (2017) · Current Opinion in Allergy and Clinical Immunology · doi:10.1097/aci.0000000000000397 · Cited by 24

Obesity susceptible novel DNA methylation marker on regulatory region of inflammation gene: results from the Korea Epigenome Study (KES)

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Transcriptome analysis of peripheral whole blood identifies crucial lncRNAs implicated in childhood asthma

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Implementation gaps for asthma prevention and control

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Connecting the epigenome, metabolome and proteome for a deeper understanding of disease

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Lysophospholipid acyltransferases orchestrate the compositional diversity of phospholipids

Valentine, W. J., Shimizu, T., & Shindou, H. (2023) · Biochimie · doi:10.1016/j.biochi.2023.08.012 · Cited by 21

Whole-genome bisulfite sequencing in systemic sclerosis provides novel targets to understand disease pathogenesis

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Genetics and epigenetics of allergy

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Epigenome-wide DNA methylation association study of circulating IgE levels identifies novel targets for asthma

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Early origins of asthma (and allergy)

Kabesch, M. (2016) · Molecular and Cellular Pediatrics · doi:10.1186/s40348-016-0056-4 · Cited by 21

Infant RSV immunoprophylaxis changes nasal epithelial DNA methylation at 6 years of age

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Local genotype influences DNA methylation at two asthma-associated regions, 5q31 and 17q21, in a founder effect population

Tuwaijri, A. A., Gagné‐Ouellet, V., Madore, A., Laprise, C., & Naumova, A. K. (2015) · Journal of Medical Genetics · doi:10.1136/jmedgenet-2015-103313 · Cited by 19

Epigenetic modifications: mechanisms of disease and biomarkers of food allergy

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Epigenome-Wide DNA Methylation Study of IgE Concentration in Relation to Self-Reported Allergies

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DNA Methylation at Birth is Associated with Childhood Serum Immunoglobulin E Levels

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Combining omics data to identify genes associated with allergic rhinitis

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How the Immune System Responds to Allergy Immunotherapy

Veneziani, I., Landolina, N., Ricci, B., Rossi, O., Moretta, L., & Maggi, E. (2022) · Biomedicines · doi:10.3390/biomedicines10112825 · Cited by 16

Erros no uso de dispositivos inalatórios associados ao tratamento da asma: uma revisão sistemática

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Methylation Profiles of IL33 and CCL26 in Bronchial Epithelial Cells are Associated with Asthma

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Statistical Challenges in Analyzing Methylation and Long-Range Chromosomal Interaction Data

Qin, Z. S., Li, B., Conneely, K. N., Wu, H., Hu, M., Ayyala, D. N., Park, Y., Jin, V. X., Zhang, F., Zhang, H., et al. (2016) · Statistics in Biosciences · doi:10.1007/s12561-016-9145-0 · Cited by 16

Genome‐Wide Association Studies in Asthma

Portelli, M. A., & Sayers, I. (2016) · Encyclopedia of Life Sciences · doi:10.1002/9780470015902.a0024639 · Cited by 15

Multifaceted roles of mitochondria in asthma

Zhang, W., Zhang, C., Zhang, Y., Zhou, X., Dong, B., Tan, H., Su, H., & Sun, X. (2024) · Cell Biology and Toxicology · doi:10.1007/s10565-024-09928-8 · Cited by 14

Could the Epigenetics of Eosinophils in Asthma and Allergy Solve Parts of the Puzzle?

Bélanger, É., & Laprise, C. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22168921 · Cited by 13

Nasal epithelial gene expression and total IgE in children and adolescents with asthma

Xu, Z., Forno, E., Sun, Y., Manni, M. L., Han, Y. Y., Kim, S., Yue, M., Vonk, J. M., Kersten, E. T. G., Acosta‐Pérez, E., et al. (2023) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2023.09.014 · Cited by 13

IgE Levels to Ascaris and House Dust Mite Allergens Are Associated With Increased Histone Acetylation at Key Type-2 Immune Genes

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Genetic Variants in CHIA and CHI3L1 Are Associated with the IgE Response to the Ascaris Resistance Marker ABA-1 and the Birch Pollen Allergen Bet v 1

Acevedo, N., Bornacelly, A., Mercado, D., Unneberg, P., Mittermann, I., Valenta, R., Kennedy, M. W., Scheynius, A., & Caraballo, L. R. (2016) · PLoS ONE · doi:10.1371/journal.pone.0167453 · Cited by 13

Exploring rare and low-frequency variants in the Saguenay–Lac-Saint-Jean population identified genes associated with asthma and allergy traits

Morin, A., Madore, A., Kwan, T., Ban, M., Partanen, J., Rönnblom, L., Syvänen, A., Sawcer, S. J., Stunnenberg, H. G., Lathrop, M. G., et al. (2018) · European Journal of Human Genetics · doi:10.1038/s41431-018-0266-4 · Cited by 14

Probiotics as a functional food ingredient in allergic diseases: regulation of CD4+ T helper cell differentiation

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Exome variants associated with asthma and allergy

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Transcriptome-wide association study of circulating IgE levels identifies novel targets for asthma and allergic diseases

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In Utero exposure to genistein enhanced intranasal house dust mite allergen-induced respiratory sensitization in young adult B6C3F1 mice

Guo, T. L., & Meng, A. H. (2016) · Toxicology Letters · doi:10.1016/j.toxlet.2016.04.017 · Cited by 9

Towards precision medicine: The application of omics technologies in asthma management

Scelfo, C., Galeone, C., Bertolini, F., Caminati, M., Ruggiero, P., Facciolongo, N. C., & Menzella, F. (2018) · F1000Research · doi:10.12688/f1000research.14309.1 · Cited by 9

Epigenomics and Early Life Human Humoral Immunity: Novel Paradigms and Research Opportunities

Gutierrez, M. J., Niño, G., Hong, X., & Wang, X. (2020) · Frontiers in Immunology · doi:10.3389/fimmu.2020.01766 · Cited by 9

Frequency of heavy vehicle traffic and association with DNA methylation at age 18 years in a subset of the Isle of Wight birth cohort

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Leveraging genomics to uncover the genetic, environmental and age-related factors leading to asthma

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LPCAT2 Methylation, a Novel Biomarker for the Severity of Cedar Pollen Allergic Rhinitis in Japan

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Genome‑wide analysis of DNA methylation and gene expression changes in an ovalbumin‑induced asthma mouse model

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Nicotine dose-dependent epigenomic-wide DNA methylation changes in the mice with long-term electronic cigarette exposure.

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Sex differences in the intergenerational link between maternal and neonatal whole blood DNA methylation: a genome-wide analysis in 2 birth cohorts

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The Role of DNA Methylation in the Pathogenesis of Disease: What can Epigenome-Wide Association Studies Tell?

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Epigenetic biomarkers of inflammation in studies on mental health: Current applications, limitations, and future directions

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Chronic allergy signaling: is it all stressed-out mitochondria?

Hussain, S.-R. A., & Grayson, M. H. (2022) · Faculty Reviews · doi:10.12703/r/11-37 · Cited by 6

The epigenomic basis of common diseases

Rodger, E. J., & Chatterjee, A. (2017) · Clinical Epigenetics · doi:10.1186/s13148-017-0313-y · Cited by 6

Maternal LINE-1 DNA Methylation in Early Spontaneous Preterm Birth

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Research and Application of Glycoprotein Sensors Based on Glycosyl Recognition

Liang, J., Tong, P., & Li, J. (2019) · Chinese Journal of Analytical Chemistry · doi:10.1016/s1872-2040(19)61185-0 · Cited by 6

Epigenetics of Allergic Diseases Allergies, Eczema, Asthma, and Rhinitis

Karmaus, W., Ziyab, A. H., & Mukherjee, N. (2018) · Elsevier eBooks · doi:10.1016/b978-0-12-812215-0.00019-4 · Cited by 5

Twin Registries Moving Forward and Meeting the Future: A Review

Baird, P. N., & Hysi, P. G. (2019) · Twin Research and Human Genetics · doi:10.1017/thg.2019.53 · Cited by 5

In utero exposure to genistein decreased intranasal house dust mite-induced respiratory allergy in middle-aged male B6C3F1 offspring

Guo, T. L., Lefever, D. E., Nagy, T., & Meng, A. H. (2020) · Toxicology Letters · doi:10.1016/j.toxlet.2020.07.013 · Cited by 5

Epigenetic determinants of allergy and tolerance

Kabesch, M. (2016) · Allergo Journal International · doi:10.1007/s40629-016-0127-z · Cited by 4

Towards a Better Understanding of Computational Models for Predicting DNA Methylation Effects at the Molecular Level

Proctor, N. K., Ertan‐Bolelli, T., Bolelli, K., Taylor, E. W., Chiu, N. H. L., & Bowen, J. P. (2020) · Current Topics in Medicinal Chemistry · doi:10.2174/1568026620666200226110019 · Cited by 4

Epigenetic determinants of allergy and tolerance

Kabesch, M. (2016) · Allergo Journal · doi:10.1007/s15007-016-1170-2 · Cited by 3

DNA Methylation and Atopic Diseases

Jiang, Y., Forno, E., & Chen, W. (2022) · Methods in molecular biology · doi:10.1007/978-1-0716-1994-0_7 · Cited by 3

Epigenetic derepression of FKBP5 by aging and stress contributes to NF-ĸB-driven inflammation and cardiovascular riskPreprint

Zannas, A. S., Jia, M., Hafner, K., Baumert, J. J., Wiechmann, T., Pape, J. C., Arloth, J., Ködel, M., Martinelli, S., Roitman, M., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/484709 · Cited by 3

A Specific Ratio of Dietary Short-Chain and Long-Chain Fructo-Oligosaccharides Shifts the Immune Response Away from Type 2 in a Murine Model for House Dust Mite-Induced Asthma

Verstegen, R. E. M., Zuurveld, M., Thijssen, S., de Bruijn, M. J. W., van Ark, I., Diks, M. A. P., Garssen, J., Folkerts, G., Kostadinova, A. I., Hendriks, R. W., et al. (2025) · Nutrients · doi:10.3390/nu17223520 · Cited by 2

Hits and defeats of genome-wide association studies of atopy and asthma

Danielewicz, H. (2017) · Journal of Applied Biomedicine · doi:10.1016/j.jab.2017.03.002 · Cited by 2

Cell-Type Heterogeneity in DNA Methylation Studies: Statistical Methods and Guidelines

Teschendorff, A. E. (2022) · Springer eBooks · doi:10.1007/978-3-030-94475-9_4 · Cited by 2

Genetic and epigenetic links to asthma

Morin, A., Ober, C., & Schoettler, N. (2022) · Elsevier eBooks · doi:10.1016/b978-0-323-85419-1.00003-7 · Cited by 3

Lysophospholipid Acyltransferase 9 Promotes Emphysema Formation via Platelet-activating Factor

Murano, H., Inoue, S., Hashidate‐Yoshida, T., Shindou, H., Shimizu, T., Otaki, Y., Minegishi, Y., Kitaoka, T., Futakuchi, M., Igarashi, A., et al. (2024) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/rcmb.2023-0253oc · Cited by 3

Potential therapeutic targets from genetic and epigenetic approaches for asthma

Zhang, Y. (2016) · World Journal of Translational Medicine · doi:10.5528/wjtm.v5.i1.14 · Cited by 2

Estimating cell-type-specific DNA methylation effects in heterogeneous cellular populations

Feng, Y. A., Guo, Y., Pain, L., Lathrop, M. G., Laprise, C., Moffatt, M. F., Cookson, W., & Liang, L. (2020) · Epigenomics · doi:10.2217/epi-2020-0147 · Cited by 2

High-resolution epigenome analysis in nasal samples derived from children with respiratory viral infections reveals striking changes upon SARS-CoV-2 infectionPreprint

Winkley, K., Koseva, B. S., Banerjee, D., Cheung, W., Selvarangan, R., Pastinen, T., & Grundberg, E. (2021) · medRxiv · doi:10.1101/2021.03.09.21253155 · Cited by 2

Epigenetic effects of cadmium and lead in asthma: Cadmium-specific associations with ADRB2 methylation and miRNA-146a expression in Egyptian Adults

Aboubakr, H. M., Alsaeed, S. A., Eltokhy, R. A. A., Magdy, S., Helmy, N. M., Shalby, A. B., Kassem, S. M., Mabrouk, M. I., Khalil, W. K. B., & Elrewieny, N. M. (2025) · Toxicology Letters · doi:10.1016/j.toxlet.2025.111754 · Cited by 1

Integrative analysis of DNA methylation and inflammatory protein biomarkers in hypertension

Zhu, M., ZHANG, J., Ma, J., Tang, X., Wang, Y., & Zhu, D. (2026) · Frontiers in Immunology · doi:10.3389/fimmu.2026.1671540 · Cited by 1

Targeted epigenome sequencing of eosinophils reveals CpG sites and regulatory variants associated with asthma

Dionne-Gagné, R., Madore, A., Boucher‐Lafleur, A., Pastinen, T., & Laprise, C. (2026) · Genomics · doi:10.1016/j.ygeno.2026.111235 · Cited by 1

The Current Genomic Approaches for Common Respiratory Diseases

Zhang, M., & Zhang, Y. (2016) · Journal of Investigative Genomics · doi:10.15406/jig.2016.03.00049 · Cited by 1

Epigenetics: Strategies for Prevention Research

Karmaus, W., Ziyab, A. H., & Mukherjee, N. (2019) · Current topics in environmental health and preventive medicine · doi:10.1007/978-981-15-0520-1_20 · Cited by 1

The Vista of Application of Specific Anaphylaxis Accurate Diagnosis Based on DNA Single-Nucleotide Methylation Sites

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Basic genetics and epigenetics for the immunologist and allergist

Chen, M., Lejeune, S., Zhou, X., & Nadeau, K. C. (2022) · Elsevier eBooks · doi:10.1016/b978-0-323-95061-9.00005-9 · Cited by 1

DNA Methylation Biomarkers in Asthma and Allergy

DeVries, A., & Vercelli, D. (2015) · Elsevier eBooks · doi:10.1016/b978-0-12-801899-6.00017-6 · Cited by 1

Epigenome : comment l’environnement influence le développement de l’allergie

Siroux, V. (2018) · Revue française d'allergologie · doi:10.1016/j.reval.2018.02.209 · Cited by 1

GSDMA drives the most replicated association with asthma in naïve CD4 + T cellsPreprint

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