Human body epigenome maps reveal noncanonical DNA methylation variation

Human DNA methylomes at base resolution show widespread epigenomic differences

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GREAT improves functional interpretation of cis-regulatory regions

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Systematic Localization of Common Disease-Associated Variation in Regulatory DNA

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Super-enhancers in the control of cell identity and disease

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The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

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X-inactivation profile reveals extensive variability in X-linked gene expression in females

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Global epigenomic reconfiguration during mammalian brain development

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Conserved role of intragenic DNA methylation in regulating alternative promoters

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Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

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Charting a dynamic DNA methylation landscape of the human genome

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A review of environmental epigenetics in aquatic invertebrates

Kim, M., Kim, D., & Lee, J. (2024) · Marine Pollution Bulletin · doi:10.1016/j.marpolbul.2024.117011 · Cited by 23

Computational Methods for Single-Cell DNA Methylome Analysis

Iqbal, W., & Zhou, W. (2022) · Genomics Proteomics & Bioinformatics · doi:10.1016/j.gpb.2022.05.007 · Cited by 24

Hepatic deficiency of the pioneer transcription factor FoxA restricts hepatitis B virus biosynthesis by the developmental regulation of viral DNA methylation

McFadden, V. C., Shalaby, R. E., Iram, S., Oropeza, C. E., Landolfi, J. A., Lyubimov, A. V., Maienschein‐Cline, M., Green, S. J., Kaestner, K. H., & McLachlan, A. (2017) · PLoS Pathogens · doi:10.1371/journal.ppat.1006239 · Cited by 23

Endosperm-based incompatibilities in hybrid monkeyflowers

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Base-excision repair pathway shapes 5-methylcytosine deamination signatures in pan-cancer genomes

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p53-intact cancers escape tumor suppression through loss of long noncoding RNA Dino

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Epigenetics of neural differentiation: Spotlight on enhancers

Giacoman-Lozano, M., Meléndez-Ramírez, C., Martínez-Ledesma, E., Durán, R. C., & Velasco, I. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.1001701 · Cited by 23

FASTmC : A Suite of Predictive Models for Nonreference-Based Estimations of DNA Methylation

Bewick, A. J., Hofmeister, B. T., Lee, K. C., Zhang, X., Hall, D. W., & Schmitz, R. J. (2015) · G3 Genes Genomes Genetics · doi:10.1534/g3.115.025668 · Cited by 22

Genome wide analyses uncover allele-specific RNA editing in human and mouse

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Network Analysis for Complex Neurodegenerative Diseases

Manzoni, C., Lewis, P. A., & Ferrari, R. (2020) · Current Genetic Medicine Reports · doi:10.1007/s40142-020-00181-z · Cited by 22

Epigenetic silencing of clustered tRNA genes in Arabidopsis

Hummel, G., Berr, A., Graindorge, S., Cognat, V., Ubrig, É., Pflieger, D., Molinier, J., & Maréchal‐Drouard, L. (2020) · Nucleic Acids Research · doi:10.1093/nar/gkaa766 · Cited by 22

Integrated analysis sheds light on evolutionary trajectories of young transcription start sites in the human genomePreprint

Li, C., Lenhard, B., & Luscombe, N. M. (2018) · Genome Research · doi:10.1101/gr.231449.117 · Cited by 24

Human body single-cell atlas of three-dimensional genome organization and DNA methylation

Zhou, J., Wu, Y., Liu, H., Tian, W., Castanon, R., Bartlett, A., Zhang, Z., Yao, G., Shi, D., Clock, B., et al. (2026) · Science · doi:10.1126/science.adx0673 · Cited by 22

GC content of plant genes is linked to past gene duplications

Bowers, J., Tang, H., Burke, J. M., & Paterson, A. H. (2022) · PLoS ONE · doi:10.1371/journal.pone.0261748 · Cited by 21

Epigenetics in endometrial carcinogenesis – part 1: DNA methylation

Bartosch, C., Lopes, J. M., & Jerónimo, C. (2017) · Epigenomics · doi:10.2217/epi-2016-0166 · Cited by 22

Heterozygous loss of function of IQSEC2/Iqsec2 leads to increased activated Arf6 and severe neurocognitive seizure phenotype in females

Jackson, M. R., Loring, K. E., Homan, C. C., Thai, M. H. N., Määttänen, L., Arvio, M., Järvelä, I. E., Shaw, M. A., Gardner, A. E., Gécz, J., et al. (2019) · Life Science Alliance · doi:10.26508/lsa.201900386 · Cited by 21

Base-Resolution Methylome of Retinal Pigment Epithelial Cells Used in the First Trial of Human Induced Pluripotent Stem Cell-Based Autologous Transplantation

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Pluripotent stem cells with low differentiation potential contain incompletely reprogrammed DNA replication

Paniza, T., Deshpande, M., Wang, N., O’Neil, R. C., Zuccaro, M. V., Smith, M. E., Madireddy, A., James, D., Ecker, J. R., Rosenwaks, Z., et al. (2020) · The Journal of Cell Biology · doi:10.1083/jcb.201909163 · Cited by 21

DNA methylation patterns expose variations in enhancer-chromatin modifications during embryonic stem cell differentiation

Alajem, A., Roth, H., Ratgauzer, S., Bavli, D., Motzik, A., Lahav, S., Peled, I., & Ram, O. (2021) · PLoS Genetics · doi:10.1371/journal.pgen.1009498 · Cited by 22

Genome wide DNA methylation analysis of alveolar capillary dysplasia lung tissue reveals aberrant methylation of genes involved in development including the FOXF1 locus

Slot, E., Boers, R., Boers, J., van IJcken, W. F. J., Tibboel, D., Gribnau, J. H., Rottier, R. J., & de Klein, A. (2021) · Clinical Epigenetics · doi:10.1186/s13148-021-01134-1 · Cited by 20

Epigenetic and epitranscriptomic regulation of axon regeneration

Cheng, Y., Song, H., Ming, G., & Weng, Y. (2023) · Molecular Psychiatry · doi:10.1038/s41380-023-02028-9 · Cited by 21

Ribosomal DNA Copy Number Variation is Coupled with DNA Methylation Changes at the 45S rDNA Locus

Razzaq, A., Bejaoui, Y., Alam, T., Saad, M., & Hajj, N. E. (2023) · Epigenetics · doi:10.1080/15592294.2023.2229203 · Cited by 21

A genome-wide screen reveals new regulators of the 2-cell-like cell state

Gupta, N., Yakhou, L., Albert, J. R., Azogui, A., Ferry, L., Kirsh, O., Miura, F., Battault, S., Yamaguchi, K., Laisné, M., et al. (2023) · Nature Structural & Molecular Biology · doi:10.1038/s41594-023-01038-z · Cited by 22

Investigating epigenetic consequences of early-life adversity: some methodological considerations

Fiori, L. M., & Turecki, G. (2016) · European Journal of Psychotraumatology · doi:10.3402/ejpt.v7.31593 · Cited by 20

Multi‐dimensional analysis identifies an immune signature predicting response to decitabine treatment in elderly patients with AML

Zhao, C., Jia, B., Wang, M., Schell, T. D., Claxton, D. F., Ehmann, W. C., Rybka, W. B., Mineishi, S., Naik, S. G., Songdej, N., et al. (2019) · British Journal of Haematology · doi:10.1111/bjh.16228 · Cited by 20

Discrimination of DNA Methylation Signal from Background Variation for Clinical Diagnostics

Sánchez, R., Yang, X., Barreras, J. R., Kundariya, H., & Mackenzie, S. A. (2019) · International Journal of Molecular Sciences · doi:10.3390/ijms20215343 · Cited by 20

A cost-effective approach to DNA methylation detection by Methyl Sensitive DArT sequencing

Pereira, W. J., Pappas, M. D. C. R., Grattapaglia, D. G., & Pappas, G. J., Jr. (2020) · PLoS ONE · doi:10.1371/journal.pone.0233800 · Cited by 20

Evolution and functioning of an X–A balance sex-determining system in hops

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NGSmethDB 2017: enhanced methylomes and differential methylation

Lebrón, R., Gómez‐Martín, C., Carpena, P., Bernaola‐Galván, P., Barturen, G., Hackenberg, M., & Oliver, J. L. T. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkw996 · Cited by 19

Single-Cell DNA Methylation Analysis in Cancer

O’Neill, H., Lee, H. J., Gupta, I., Rodger, E. J., & Chatterjee, A. (2022) · Cancers · doi:10.3390/cancers14246171 · Cited by 19

Mechanisms of epigenetic remodelling during preimplantation development

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A Lexicon of DNA Modifications: Their Roles in Embryo Development and the Germline

Zhu, Q., Stöger, R. J., & Alberio, R. (2018) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2018.00024 · Cited by 21

Circadian Mechanisms in Medicine

Lin, H. Y.-H., Yang, M.-Y., & Lin, S.-F. (2021) · New England Journal of Medicine · doi:10.1056/nejmc2104154 · Cited by 19

RNA Epigenetics in Cancer: Current Knowledge and Therapeutic Implications

Huang, S., Li, Z., Lin, W., Xie, R., & Huang, H. (2025) · MedComm · doi:10.1002/mco2.70322 · Cited by 19

Identification of inflammation-related DNA methylation biomarkers in periodontitis patients based on weighted co-expression analysis

Wang, P., Wang, B., Zhang, Z., & Wang, Z. (2021) · Aging · doi:10.18632/aging.203378 · Cited by 19

DNA methylation dynamics: identification and functional annotation

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Transgene‐independent heredity of Rd DM ‐mediated transcriptional gene silencing of endogenous genes in rice

Wakasa, Y., Kawakatsu, T., Harada, T., & Takaiwa, F. (2018) · Plant Biotechnology Journal · doi:10.1111/pbi.12934 · Cited by 18

Identification of diagnostic biomarkers in patients with gestational diabetes mellitus based on transcriptome gene expression and methylation correlation analysis

Li, E., Luo, T., & Wang, Y. (2019) · Reproductive Biology and Endocrinology · doi:10.1186/s12958-019-0556-x · Cited by 18

Gene–methylation interactions: discovering region-wise DNA methylation levels that modify SNP-associated disease risk

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Prenatal testosterone triggers long-term behavioral changes in male zebra finches: unravelling the neurogenomic mechanisms

Bentz, A. B., Niederhuth, C. E., Carruth, L. L., & Navara, K. J. (2021) · BMC Genomics · doi:10.1186/s12864-021-07466-9 · Cited by 18

Associations between DNA methylation and telomere length during early life: Insight from wild zebra finches (Taeniopygia guttata)

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DNA methylation in adult diffuse gliomas

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Changes of gene expression but not cytosine methylation are associated with male parental care reflecting behavioural state, social context, and individual flexibility

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Whole organism aging: Parabiosis, inflammaging, epigenetics, and peripheral and central aging clocks. The ARS of aging

Pamplona, R., Jové, M., Gómez, J., & Barja, G. (2023) · Experimental Gerontology · doi:10.1016/j.exger.2023.112137 · Cited by 17

Case series on clinical applications of liquid biopsy in pediatric solid tumors: towards improved diagnostics and disease monitoring

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Enzymology of Mammalian DNA Methyltransferases

Jurkowska, R. Z., & Jeltsch, A. (2022) · Advances in experimental medicine and biology · doi:10.1007/978-3-031-11454-0_4 · Cited by 18

Aberrant DNA methylation of pregnane X receptor underlies metabolic gene alterations in the diabetic kidney

Watanabe, A., Marumo, T., Kawarazaki, W., Nishimoto, M., Ayuzawa, N., Ueda, K., Hirohama, D., Tanaka, T., Yagi, S., Ota, S., et al. (2017) · American Journal of Physiology-Renal Physiology · doi:10.1152/ajprenal.00390.2017 · Cited by 17

Erratum: Corrigendum: Human body epigenome maps reveal noncanonical DNA methylation variation

Schultz, M. D., He, Y., Whitaker, J. W., Hariharan, M., Mukamel, E. A., Leung, D., Rajagopal, N., Nery, J. R., Urich, M. A., Chen, H., et al. (2015) · Nature · doi:10.1038/nature16179 · Cited by 17

Epigenomic Diversity of Cortical Projection Neurons in the Mouse Brain

Zhang, Z., Zhou, J., Tan, P., Pang, Y., Rivkin, A., Kirchgessner, M. A., Williams, E., Lee, C.-T., Liu, H., Franklin, A. D., et al. (2020) · doi:10.1101/2020.04.01.019612 · Cited by 75

Genome-wide single-molecule analysis of long-read DNA methylation reveals heterogeneous patterns at heterochromatin that reflect nucleosome organisation

Kerr, L., Kafetzopoulos, I., Grima, R., & Sproul, D. (2023) · PLoS Genetics · doi:10.1371/journal.pgen.1010958 · Cited by 16

Genome-wide DNA methylation analysis of the porcine hypothalamus-pituitary-ovary axis

Yuan, X., Zhang, Z., Li, B., Gao, N., Zhang, H., Sangild, P. T., & Li, J. (2017) · Scientific Reports · doi:10.1038/s41598-017-04603-x · Cited by 16

Capturing functional epigenomes for insight into metabolic diseases

Allum, F., & Grundberg, E. (2020) · Molecular Metabolism · doi:10.1016/j.molmet.2019.12.016 · Cited by 18

A Pilot Study Using a Multistaged Integrated Analysis of Gene Expression and Methylation to Evaluate Mechanisms for Evening Fatigue in Women Who Received Chemotherapy for Breast Cancer

Flowers, E., Flentje, A., Levine, J. D., Olshen, A. B., Hammer, M. J., Paul, S. M., Conley, Y. P., Miaskowski, C. A., & Kober, K. M. (2019) · Biological Research For Nursing · doi:10.1177/1099800418823286 · Cited by 17

The Expansion and Diversification of Epigenetic Regulatory Networks Underpins Major Transitions in the Evolution of Land Plants

Petroll, R., Papareddy, R. K., Krela, R., Laigle, A., Rivière, Q., Bišová, K., Mozgová, I., & Borg, M. (2025) · Molecular Biology and Evolution · doi:10.1093/molbev/msaf064 · Cited by 15

Single-cell DNA methylome and 3D genome atlas of human subcutaneous adipose tissue

Chen, Z. J., Das, S. S., Kar, A., Lee, S. H., Abuhanna, K. D., Alvarez, M., Sukhatme, M. G., Wang, Z., Gelev, K. Z., Heffel, M. G., et al. (2025) · Nature Genetics · doi:10.1038/s41588-025-02300-4 · Cited by 17

The unusual predominance of maintenance DNA methylation in Spirodela polyrhiza

Harkess, A., Bewick, A. J., Lu, Z., Fourounjian, P., Joachim, M., Michael, T. P., Schmitz, R. J., & Meyers, B. C. (2024) · G3 Genes Genomes Genetics · doi:10.1093/g3journal/jkae004 · Cited by 15

Tissue of origin prediction for cancer of unknown primary using a targeted methylation sequencing panel

Sun, M., Xu, B., Chen, C., Zhu, Y., Li, X., & Chen, K. (2024) · Clinical Epigenetics · doi:10.1186/s13148-024-01638-6 · Cited by 15

Epigenetic regulation of early neural fate commitment

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Characterization of Sex-Based Dna Methylation Signatures in the Airways During Early Life

Niño, C. L., Pérez, G. F., Isaza, N. A., Gutierrez, M. J., Gómez, J. L., & Niño, G. (2018) · Scientific Reports · doi:10.1038/s41598-018-23063-5 · Cited by 15

The Methylome of Vertebrate Sex Chromosomes

Waters, S. A., Capraro, A., McIntyre, K. L., Graves, J. A. M., & Waters, P. D. (2018) · Genes · doi:10.3390/genes9050230 · Cited by 15

Epigenome-wide association study of narcolepsy-affected lateral hypothalamic brains, and overlapping DNA methylation profiles between narcolepsy and multiple sclerosis

Shimada, M., Miyagawa, T., Takeshima, A., Kakita, A., Toyoda, H., Niizato, K., Oshima, K., Tokunaga, K., & Honda, M. (2019) · SLEEP · doi:10.1093/sleep/zsz198 · Cited by 17

Koala methylomes reveal divergent and conserved DNA methylation signatures of X chromosome regulation

Singh, D., Sun, D., KING, A. G., Alquezar‐Planas, D. E., Johnson, R. N., Alvarez‐Ponce, D., & Yi, S. V. (2021) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2020.2244 · Cited by 15

Developmental Accumulation of Gene Body and Transposon Non-CpG Methylation in the Zebrafish Brain

Ross, S. E., Hesselson, D., & Bogdanović, O. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.643603 · Cited by 16

H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination

Zhang, H., Liu, Y., Xie, Y., Zhu, Y., Liu, J., & Lu, F. (2022) · Science China Life Sciences · doi:10.1007/s11427-022-2155-0 · Cited by 16

Current and Emerging Technologies for the Analysis of the Genome-Wide and Locus-Specific DNA Methylation Patterns

Tost, J. (2022) · Advances in experimental medicine and biology · doi:10.1007/978-3-031-11454-0_16 · Cited by 15

Neurodevelopment and early pharmacological interventions in Fragile X Syndrome

Milla, L. A., López‐Corral, L., Rivera, J., Zúñiga, N., Pino, G., Nunez-Parra, A., & Rio, C. A. C.-D. (2023) · Frontiers in Neuroscience · doi:10.3389/fnins.2023.1213410 · Cited by 15

Role of epigenetics and DNA-damage in asthma

Zahiruddin, A. S., Grant, J. A., & Sur, S. (2017) · Current Opinion in Allergy and Clinical Immunology · doi:10.1097/aci.0000000000000415 · Cited by 15

Insights from multidimensional analyses of the pan‐cancer DNA methylome heterogeneity and the uncanonical CpG–gene associations

Liu, Y., Huang, R., Liu, Y., Song, W., Wang, Y., Yang, Y., Dong, S., & Yang, X. (2018) · International Journal of Cancer · doi:10.1002/ijc.31810 · Cited by 16

Transposable Element Dynamics and Regulation during Zygotic Genome Activation in Mammalian Embryos and Embryonic Stem Cell Model Systems

Low, Y., Tan, D. E. K., Hu, Z., Tan, S. Y. X., & Tee, W. (2021) · Stem Cells International · doi:10.1155/2021/1624669 · Cited by 14

Nanopore sequencing reveals methylation changes associated with obesity in circulating cell-free DNA from Göttingen Minipigs

Drag, M., Debes, K. P., Franck, C. S., Flethøj, M., Lyhne, M. K., Møller, J. E., Ludvigsen, T. P., Jespersen, T., Olsen, L. H., & Kilpeläinen, T. O. (2023) · Epigenetics · doi:10.1080/15592294.2023.2199374 · Cited by 14

Heat stress response and transposon control in plant shoot stem cells

Nguyen, V. H., Scheid, O. M., & Gutzat, R. (2025) · PLANT PHYSIOLOGY · doi:10.1093/plphys/kiaf110 · Cited by 14

Loss of expression and prognosis value of alpha-internexin in gastroenteropancreatic neuroendocrine neoplasm

Wang, Y., Chen, Y., Li, X., Hu, W., Zhang, Y., Chen, L., Chen, M., & Chen, J. (2018) · BMC Cancer · doi:10.1186/s12885-018-4449-8 · Cited by 14

Experience‐dependent transcriptional regulation in juvenile brain development

Sakai, A., & Sugiyama, S. (2018) · Development Growth & Differentiation · doi:10.1111/dgd.12571 · Cited by 15

A multi-scale integrated analysis identifies KRT8 as a pan-cancer early biomarker

Scott, M. K. D., Ozawa, M. G., Chu, P., Limaye, M. R., Nair, V. S., Schaffert, S. A., Koong, A. C., West, R. B., & Khatri, P. (2020) · Pacific Symposium on Biocomputing (PSB) · doi:10.1142/9789811232701_0028 · Cited by 15

Methylation patterns at fledging predict delayed dispersal in a cooperatively breeding bird

Liebl, A. L., Wesner, J. S., Russell, A. F., & Schrey, A. W. (2021) · PLoS ONE · doi:10.1371/journal.pone.0252227 · Cited by 14

Epigenomic Modifications in Modern and Ancient Genomes

Niiranen, L., Leciej, D., Edlund, H., Bernhardsson, C., Fraser, M., Sánchez‐Quinto, F., Herzig, K., Jakobsson, M., Walkowiak, J., & Thalmann, O. (2022) · Genes · doi:10.3390/genes13020178 · Cited by 17

A multi-omics approach to visualize early neuronal differentiation from hESCs in 4D

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Molecular microevolution and epigenetic patterns of the long non-coding gene H19 show its potential function in pig domestication and breed divergence

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Epigenetics in Schistosomes: What We Know and What We Need Know

Liu, W. (2016) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2016.00149 · Cited by 14

17β-Estradiol Increases Non-CpG Methylation in Exon 1 of the Rainbow Trout (Oncorhynchus mykiss) MyoD Gene

Koganti, P. P., Wang, J., Cleveland, B. M., & Yao, J. (2017) · Marine Biotechnology · doi:10.1007/s10126-017-9756-6 · Cited by 14

Nichtkanonische Basen im Genom: die regulative Informationsebene in der DNA

Carell, T., Kurz, M. Q., Müller, M., Rossa, M., & Spada, F. (2017) · Angewandte Chemie · doi:10.1002/ange.201708228 · Cited by 14

“Epigenome-wide methylation profile of chronic kidney disease-derived arterial DNA uncovers novel pathways in disease-associated cardiovascular pathology.”

Dritsoula, A., Kislikova, M., Oomatia, A., Webster, A. P., Beck, S., Ponticos, M., Lindsey, B., Norman, J. T., Wheeler, D. C., Oates, T. M., et al. (2020) · Epigenetics · doi:10.1080/15592294.2020.1819666 · Cited by 14

Progressive Domain Segregation in Early Embryonic Development and Underlying Correlation to Genetic and Epigenetic Changes

Quan, H., Tian, H., Liu, S., Xue, Y., Zhang, Y., Xie, W., & Gao, Y. Q. (2021) · Cells · doi:10.3390/cells10102521 · Cited by 14

Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhizaPreprint

Dombey, R., Buendía-Ávila, D., Barragán‐Borrero, V., Diezma‐Navas, L., Ponce-Mañe, A., Vargas-Guerrero, J. M., Elias, R., & Marí‐Ordóñez, A. (2025) · Genome Research · doi:10.1101/gr.279532.124 · Cited by 14

Epigenetic regulation of plastin 3 expression by the macrosatellite DXZ4 and the transcriptional regulator CHD4

Strathmann, E. A., Hölker, I., Tschernoster, N., Hosseinibarkooie, S., Côme, J., Martinat, C., Altmüller, J., & Wirth, B. (2023) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2023.02.004 · Cited by 13

Comprehensive benchmarking of tools for nanopore-based detection of DNA methylation

Kulkarni, O., Mathew, R. J., Jana, R., Zaveri, L., Ara, S., Nagabandi, T., Singh, N. K., Tallapaka, K. B., & Sowpati, D. T. (2026) · Nature Communications · doi:10.1038/s41467-026-75183-6 · Cited by 17

DNA damage triggers heritable alterations in DNA methylation patterns in Arabidopsis

Li, J., Liang, W., He, X., & Qian, W. (2025) · Molecular Plant · doi:10.1016/j.molp.2025.01.019 · Cited by 13

Conflicts of CpG density and DNA methylation are proximally and distally involved in gene regulation in human and mouse tissues

Chen, F., Zhang, Q., Deng, X., Zhang, X., Chen, C., Lv, D., Li, Y., Li, D., Zhang, Y., Li, P., et al. (2018) · Epigenetics · doi:10.1080/15592294.2018.1500057 · Cited by 13

A data‐driven, high‐throughput methodology to determine tissue‐specific differentially methylated regions able to discriminate body fluids

Antunes, J., Gauthier, Q. T., Aguiar‐Pulido, V., Duncan, G., & McCord, B. R. (2021) · Electrophoresis · doi:10.1002/elps.202000217 · Cited by 13

Differential DNA methylation in recovery from shift work disorder

Lahtinen, A., Häkkinen, A., Puttonen, S., Vanttola, P., Viitasalo, K., Porkka‐Heiskanen, T., Härmä, M., & Paunio, T. (2021) · Scientific Reports · doi:10.1038/s41598-021-82627-0 · Cited by 13

Proteins That Read DNA Methylation

Liu, K., Shimbo, T., Song, X., Wade, P. A., & Min, J. (2022) · Advances in experimental medicine and biology · doi:10.1007/978-3-031-11454-0_11 · Cited by 13

Hypomethylation in MTNR1B: a novel epigenetic marker for atherosclerosis profiling using stenosis radiophenotype and blood inflammatory cells

Kim, J. Y., Jelı́nek, J., Lee, Y. H., Kim, D. H., Kang, K., Ryu, S. H., Moon, H. R., Cho, K., Cha, J., Cha, J. K., et al. (2023) · Clinical Epigenetics · doi:10.1186/s13148-023-01423-x · Cited by 13

DNA methylation signatures of duplicate gene evolution in angiosperms

Raju, S. K. K., Ledford, M., & Niederhuth, C. E. (2023) · PLANT PHYSIOLOGY · doi:10.1093/plphys/kiad220 · Cited by 13

Mammalian non-CG methylations are conserved and cell-type specific and may have been involved in the evolution of transposon elements

Guo, W., Zhang, M. Q., & Wu, H. (2016) · Scientific Reports · doi:10.1038/srep32207 · Cited by 14

Isopathic Use of Auto-Sarcode of DNA as Anti-Miasmatic Homeopathic Medicine and Modulator of Gene Expression?

Teixeira, M. Z. (2019) · Homeopathy · doi:10.1055/s-0038-1676810 · Cited by 13

A genome-wide analysis of DNA methylation identifies a novel association signal for Lp(a) concentrations in the LPA promoter

Coassin, S., Hermann‐Kleiter, N., Haun, M., Wahl, S., Wilson, R., Paulweber, B., Kunze, S., Meitinger, T., Strauch, K., Peters, A., et al. (2020) · PLoS ONE · doi:10.1371/journal.pone.0232073 · Cited by 13

Vitamin D Metabolic Pathway Genes Polymorphisms and Their Methylation Levels in Association With Rheumatoid Arthritis

Zhang, T., Li, H., Huang, Q., Wang, L., & Li, X. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.731565 · Cited by 13

Negative Evidence for a Functional Role of Neuronal DNMT3a in Persistent Pain

Saunders, J., Hore, Z. L., Gentry, C., McMahon, S. B., & Denk, F. (2018) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2018.00332 · Cited by 13

Multi-omic profiling of transcriptome and DNA methylome in single nuclei with molecular partitioningPreprint

Luo, C., Liu, H., Wang, B.-A., Bartlett, A., Rivkin, A. C., Nery, J. R., & Ecker, J. R. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/434845 · Cited by 13

Interspecies Organoids Reveal Human-Specific Molecular Features of Dopaminergic Neuron Development and VulnerabilityPreprint

Nolbrant, S., Wallace, J. L., Ding, J., Zhu, T., Sevetson, J. L., Kajtez, J., Baldacci, I. A., Corrigan, E. K., Hoglin, K., McMullen, R., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.11.14.623592 · Cited by 13

DNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns

Lokk, K., Modhukur, V., Rajashekar, B., Märtens, K., Mägi, R., Kolde, R., Koltšina, M., Nilsson, T. K., Vilo, J., Salumets, A., et al. (2014) · Genome Biology · doi:10.1186/gb-2014-15-4-r54 · Cited by 444

Deep methylomes reveal diverse roles of DNA methylation in human tissues (235.1)

Ecker, J. R., Schultz, M. D., He, Y., Hariharan, M., Whitaker, J. W., Nery, J. R., Urich, M. A., Chen, H., Leung, D., Rajagopal, N., et al. (2014) · The FASEB Journal · doi:10.1096/fasebj.28.1_supplement.235.1

Tissue-specific variation in DNA methylation levels along human chromosome 1

de Bustos, C., Ramos, E., Young, J. M., Tran, R. K., Menzel, U., Langford, C. F., Eichler, E. E., Hsu, L.-I., Henikoff, S., Dumanski, J. P., et al. (2009) · Epigenetics & Chromatin · doi:10.1186/1756-8935-2-7 · Cited by 66

Human non-CpG methylation patterns display both tissue-specific and inter-individual differences suggestive of underlying function

Titcombe, P., Murray, R. J. S., Hewitt, M., Antoun, E., Cooper, C. C., Inskip, H. M., Holbrook, J. D., Godfrey, K. M., Lillycrop, K. A., Hanson, M. A., et al. (2021) · Epigenetics · doi:10.1080/15592294.2021.1950990 · Cited by 25

Tissue specific DNA methylation of CpG islands in normal human adult somatic tissues distinguishes neural from non-neural tissues

Ghosh, S., Yates, A. J., Frühwald, M. C., Miecznikowski, J. C., Plass, C., & Smiraglia, D. J. (2010) · Epigenetics · doi:10.4161/epi.5.6.12228 · Cited by 100