Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

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Model-based Analysis of ChIP-Seq (MACS)

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

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TopHat: discovering splice junctions with RNA-Seq

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NCBI GEO: archive for functional genomics data sets—update

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A bivalent chromatin structure marks key developmental genes in embryonic stem cells

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclassesPreprint

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ChromHMM: automating chromatin-state discovery and characterization

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Role of histone acylation and related technical developments

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Quantitative Modeling of Stemness in Single-Cell RNA Sequencing Data: A Nonlinear One-Class Support Vector Machine Method

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Transcriptome-Wide Profiling of Nascent RNA in Neurons with Enriched H3K27ac Signal Elevates eRNA Identification Efficiency

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Genome-wide profiling of the epigenetic landscape of histone variant TH2B in murine oocytes and pre-implantation embryos

Singh, I., & Parte, P. P. (2024) · Reproduction · doi:10.1530/rep-24-0035 · Cited by 1

Unveiling unique expression patterns of D20S16 satellite DNA in human embryonic development

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Epigenome reprogramming in the male and female germ line

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GLEANER: a web server for GermLine cycle Expression ANalysis and Epigenetic Roadmap visualization

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Correction: Clustering-local-unique-enriched-signals (CLUES) promotes identification of novel regulators of ES cell self-renewal and pluripotency

Wu, C., Yang, J., Shen, M., Pan, C., Cheng, G., Jia, D., Zhu, J., Zhang, L., Zheng, M., & Jia, J. (2018) · PLoS ONE · doi:10.1371/journal.pone.0210042 · Cited by 1

EpiAlign: an alignment-based bioinformatic tool for comparing chromatin state sequencesPreprint

Ge, X., Zhang, H., Xie, L., Li, W. V., Kwon, S. B., & Li, J. J. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/566299 · Cited by 1

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Chovanec, P., Collier, A. J., Krueger, C., Várnai, C., Schoenfelder, S., Corcoran, A. E., & Rugg‐Gunn, P. J. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2019.12.13.875286 · Cited by 1

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Meng, T., Zhou, Q., Ma, X., Liu, X., Meng, Q., Huang, X., Liu, H., Lei, W., Zhao, Z., Ouyang, Y., et al. (2021) · Research Square · doi:10.21203/rs.3.pex-1212/v1 · Cited by 1

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Zhao, J., Yao, K., Yu, H., Zhang, L., Xu, Y., Hu, Z., Zhang, J., Chen, L., Sun, Z., Zhu, Y., et al. (2021) · Research Square · doi:10.21203/rs.3.rs-623821/v1 · Cited by 1

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Dang, Y., Luo, L., Shi, Y., Li, S., Wang, S., & Zhang, K. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.11.22.469629 · Cited by 1

H3K4 di- and trimethylation modulate the stability of RNA polymerase II pausingPreprint

Hu, S., Song, A., Peng, L., Tang, N., Qiao, Z., Wang, Z., & Chen, F. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.11.28.518073 · Cited by 1

ADNP Modulates SINE B2-Derived CTCF-Binding Sites during Blastocyst Formation in MousePreprint

Wang, W., Gao, R., Yang, D., Ma, M., Zang, R., Wang, X., Chen, C., Chen, J., Kou, X., Zhao, Y., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.11.24.567719 · Cited by 1

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Massa, F., Motamedi, F. J., Šerys, M., Tison, A., Loubat, A., Lacas‐Gervais, S., Martin, L., Belahbib, H., Sarrazin, S., Sieweke, M. H., et al. (2023) · doi:10.7554/elife.93138.1 · Cited by 1

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A wave of minor de novo DNA methylation initiates in mouse 8-cell embryos and co-regulates imprinted X- chromosome inactivationPreprint

Yue, Y., Fu, W., Yang, Q., Zhang, C., Wang, W., Chu, M., Lyu, Q., Tang, Y., Cui, J., Wang, X., et al. (2024) · eLife · doi:10.7554/elife.92165.1 · Cited by 1

Co-Transcriptional Rna Processing Boosts Zygotic Gene ActivationPreprint

Xu, J., Li, X., Hao, X., Hu, X., Ma, S., Hong, Y., Zhang, J., Yan, D., Deng, H., Na, J., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.09.14.613088 · Cited by 1

CXXC-finger protein 1 associates with FOXP3 to stabilize homeostasis and suppressive functions of regulatory T cellsPreprint

Meng, X., Zhu, Y., Liu, K., Wang, Y., Liu, X., Liu, C., Zeng, Y. J., Wang, S., Gao, X., Shen, X., et al. (2024) · eLife · doi:10.7554/elife.103417 · Cited by 1

H3K27 and H3K9 methylation mask potential CTCF binding sites to maintain 3D genome integrityPreprint

Fukuda, K., Shimura, C., & Shinkai, Y. (2025) · Genome Research · doi:10.1101/gr.280732.125 · Cited by 1

Business Law for Business Students

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Epigenomic and 3D genome architecture in naïve and primed human embryonic stem cell statesPreprint

Battle, S. L., Jayavelu, N. D., Azad, R. N., Hesson, J., Ahmed, F. N., Zoller, J. A., Mathieu, J., Ruohola‐Baker, H., Ware, C. B., & Hawkins, R. D. (2017) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/181123

Dynamic chromatin accessibility unveils a regulatory landscape in early embryogenesis in human†

Liu, T., & Yue, F. (2018) · Biology of Reproduction · doi:10.1093/biolre/ioy154

Time-resolved succession of epigenetic regulation during early mammalian developmentPreprint

Chen, H., Li, H., Jiang, S., Huang, X., Li, W., Li, R., Zhang, Z., Hong, H., Zhao, C., & Bo, X. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/503805

Improved Detection of Epigenomic Marks with Mixed-Effects Hidden Markov Models

Baldoni, P. L., Rashid, N. U., & Ibrahim, J. G. (2019) · Biometrics · doi:10.1111/biom.13083

Principles of 3D Nucleus Organization and Epigenetic Regulation in Diploid Genome Revealed by Multi-omic Data from Hybrid MousePreprint

Han, Z., Kairong, C., Placek, K., Hong, N., Lin, C., Chen, W., Zhao, K., & Jin, W. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/783662

Masakari: visualization supported statistical analysis of genome segmentations

Zeckzer, D., Hausdorf, A., Hinzmann, N., Müller, L., & Wiegreffe, D. (2020) · BMC Bioinformatics · doi:10.1186/s12859-020-03761-6

Genome-wide decoupling of H2Aub and H3K27me3 in early mouse developmentPreprint

Zhu, Y., Yu, J., Rong, Y., Wu, Y., Fan, H., & Shen, L. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.03.23.436550

Computer Designed PRC2 Inhibitor, EBdCas9, Reveals Functional TATA Boxes in Distal Promoter RegionsPreprint

Levy, S., Somasundaram, L., Raj, I. X., Ic-Mex, D., Schmidt, S., Alghadeer, A., Honkanen, H., Hawkins, R. D., Mathieu, J., Wang, Y., et al. (2020) · SSRN Electronic Journal · doi:10.2139/ssrn.3748745

The chromatin mapping of H3K4me3 and H3K27me3 modification in ovaries during porcine puberty initiationPreprint

Zhong, Y., He, Y., Yuan, X., Diao, S., Zhou, X., Li, Q., Zhang, Z., Zhang, H., & Li, J. (2020) · Research Square · doi:10.21203/rs.3.rs-45891/v1

Evaluation of ChIC-based data requires normalization that properly retains signal-to-noise ratiosPreprint

Liu, B., Chen, F., & Xie, W. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.08.14.456176

Abnormal Epigenetic Modifications in Surviving Somatic Cell Cloned Cattle Associated With Donor Cell TypePreprint

Ma, H., Huang, T. L., Zhou, J., Li, J., Cui, S., Ye, C., Lü, C., Bai, Y., & Cao, G. (2021) · Research Square · doi:10.21203/rs.3.rs-853162/v1

Resetting of H3K4me2 during mammalian parental-to-zygote transitionPreprint

Wang, C., Li, Y., Wang, Y., Shi, Y., Meng, X., Li, W., Guo, J., Hu, K., Chen, H., & Xu, J. (2022) · eLife · doi:10.1101/2022.05.05.490401

SOX15 regulates stem cell pluripotency and promotes neural fate during differentiation by activating Hes5Preprint

Choi, E., Vodnala, M., Saini, P., Zerbato, M., Ho, J. J., Anugula, S., Sui, S. J. H., Yoon, J. H., Inouye, C. J., & Fong, Y. W. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.04.25.489402

Faculty Opinions recommendation of Genome-lamina interactions are established de novo in the early mouse embryo.

Xie, W. (2019) · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature · doi:10.3410/f.735806307.793562391

Epigenetic Modification in Oocyte and Preimplantation Embryonic Development

Qiao, J., Ren, Y., & Chang, W. (2017) · Reproductive and Developmental Medicine · doi:10.4103/wkmp-0152.210694

Faculty Opinions recommendation of Epigenomic analysis of gastrulation identifies a unique chromatin state for primed pluripotency.

Tiwari, V. K., & Mariappan, A. (2020) · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature · doi:10.3410/f.737090357.793573184

AI-driven designed protein epigenomics

Levy, S., & Ruohola‐Baker, H. (2023) · Clinical Research in Oncology · doi:10.46439/oncology.1.01

Epigenetics

Biasibetti, H., & Kobor, M. S. (2023) · Springer eBooks · doi:10.1007/978-3-031-20792-1_8

Diagnostic histone modification analysis of individual preimplantation embryosPreprint

Zeng, Y., Hoshino, Y., Susami, K., Honda, S., Minami, N., & Ikeda, S. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.07.20.549969

Knockout CsRBOH5.1 causes global decrease of H3K4me3 on genes during recovery after cold stress acclimation, leading to acclimation failurePreprint

Sun, M., Di, Q., Li, Y., Zhou, M., Yan, Y., He, C., Wang, J., Wang, X., & Yu, X. (2023) · Research Square · doi:10.21203/rs.3.rs-3226653/v1

MAFB drives differentiation by permitting WT1 binding to podocyte specific promotersPreprint

Massa, F., Motamedi, F. J., Šerys, M., Tison, A., Loubat, A., Lacas‐Gervais, S., Martin, L., Belahbib, H., Sarrazin, S., Sieweke, M. H., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.09.06.555670

A wave of minor de novo DNA methylation initiates in mouse 8-cell embryos and co-regulates imprinted X- chromosome inactivation with H3K27me3Preprint

Yue, Y., Fu, W., Yang, Q., Zhang, C., Wang, W., Chu, M., Lyu, Q., Tang, Y., Cui, J., Wang, X., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.10.06.561284

Stem cell epigenetics in development and disease

Seow, W. Q., Lim, L. Y., Kong, D., & Teo, A. K. K. (2023) · Elsevier eBooks · doi:10.1016/b978-0-443-21863-7.00014-7

Berberine impairs spermatogenesis in mice by modulating ornithine metabolism via gut microbiota regulationPreprint

Qu, W., Xu, Y., Lei, J., Yang, J., Shi, H., Wang, J., Yu, X., Chen, J., Wang, B., Han, Y., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.10.30.564855

MAFB drives differentiation by permitting WT1 binding to podocyte specific promotersPreprint

Massa, F., Motamedi, F. J., Šerys, M., Tison, A., Loubat, A., Lacas‐Gervais, S., Martin, L., Belahbib, H., Sarrazin, S., Sieweke, M. H., et al. (2023) · doi:10.7554/elife.93138

A wave of minor de novo DNA methylation initiates in mouse 8-cell embryos and co-regulates imprinted X- chromosome inactivation with H3K27me3Preprint

Yue, Y., Fu, W., Yang, Q., Zhang, C., Wang, W., Chu, M., Lyu, Q., Tang, Y., Cui, J., Wang, X., et al. (2024) · eLife · doi:10.7554/elife.92165

Additional file 12 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611815

Additional file 2 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611776

Additional file 10 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611809

Additional file 5 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611788

Additional file 3 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611782

Additional file 11 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611812

Additional file 7 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611794

Additional file 14 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611824

Additional file 6 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611791

Additional file 4 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611785

Additional file 15 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611827

Additional file 9 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611806

Additional file 13 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611821

Additional file 8 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H. E., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611803

Resetting of H3K4me2 during mammalian parental-to-zygote transitionPreprint

Wang, C., Li, Y., Wang, Y., Shi, Y., Meng, X., Li, Y., Guo, J., Hu, K., Chen, H., & Xu, J. (2024) · eLife · doi:10.7554/elife.99417

Resetting of H3K4me2 during mammalian parental-to-zygote transitionPreprint

Wang, C., Li, Y., Wang, Y., Shi, Y., Meng, X., Li, Y., Guo, J., Hu, K., Chen, H., & Xu, J. (2024) · eLife · doi:10.7554/elife.99417.1

H3K4me3 methyltransferase KMT2F promotes pre-initiation complex formation by RNA Polymerase I to regulate ribosomal RNA transcriptionPreprint

Lone, K. A., Karole, A. M., Ravindran, G., & Tyagi, S. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.11.04.621718

The oviduct, sperm, and eggs : a multiomics AI integrated in vivo characterization during pregnancy

Finnerty, R. M. (2024) · doi:10.32469/10355/105885

CXXC-finger protein 1 associates with FOXP3 to stabilize homeostasis and suppressive functions of regulatory T cellsPreprint

Meng, X., Zhu, Y., Liu, K., Wang, Y., Liu, X., Liu, C., Zeng, Y. J., Wang, S., Gao, X., Shen, X., et al. (2024) · eLife · doi:10.7554/elife.103417.1

Embryonic Signatures of Intergenerational Inheritance across Paternal Environments and Genetic BackgroundsPreprint

Dura, M., Ranjan, B., Paribeni, R., Paribeni, V., Serrano, J. B., Villacorta, L., Beneš, V., Boruc, O., Bošković, A., & Hackett, J. A. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.11.25.624914

Histone methylation reprogramming underpins gene expression dynamics in Phytophthora during host infection

Shu, H., Yin, G., Wu, M., Fang, Y., Fang, Y. “., Wang, Y., Chen, H., & Dong, S. (2024) · Science China Life Sciences · doi:10.1007/s11427-024-2780-4

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Varsini, Kancharla, S., Kolli, P., Mandadapu, G., & Jena, M. K. (2024) · Asia-Pacific Journal of Molecular Biology and Biotechnology · doi:10.35118/apjmbb.2024.032.4.09

PRMT3 gene expression and methylation levels in arrested embryos: Implications for developmental arrest defects

Zhang, W., Li, S., Li, K., Sun, N., Lv, R., Ma, J., Yin, P., Tong, G., Chen, Y., Lu, L., et al. (2025) · Developmental Biology · doi:10.1016/j.ydbio.2025.01.018

A wave of minor de novo DNA methylation initiates in mouse 8-cell embryos and co-regulates imprinted X- chromosome inactivation with H3K27me3Preprint

Yue, Y., Fu, W., Yang, Q., Zhang, C., Wang, W., Chu, M., Lyu, Q., Tang, Y., Cui, J., Wang, X., et al. (2025) · eLife · doi:10.7554/elife.92165.2 · Cited by 1

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Heterologous expression of bovine histone H1foo into porcine fibroblasts alters the transcriptome profile but not embryo development following nuclear transfer

de Macedo, M. P., Glanzner, W. G., Gutierrez, K., Currin, L., Rissi, V. B., Baldassarre, H., McGraw, S., & Bordignon, V. (2025) · Journal of Assisted Reproduction and Genetics · doi:10.1007/s10815-025-03437-1

CXXC-finger protein 1 associates with FOXP3 to stabilize homeostasis and suppressive functions of regulatory T cellsPreprint

Meng, X., Zhu, Y., Liu, K., Wang, Y., Liu, X., Liu, C., Zeng, Y. J., Wang, S., Gao, X., Shen, X., et al. (2025) · eLife · doi:10.7554/elife.103417.2

Transgenerational effects induced by thiacloprid in Anterior prostate tissue are associated with alterations in DNA methylation at developmental genesPreprint

Dali, O., lahmidi, C. D., Belkhir, T. M., Gestas, T. D., Kervarrec, C., Kernanec, P.-Y., & Smagulova, F. O. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.06.20.660738

Increased rate of de novo single nucleotide mutation in house mice born through assisted reproductionPreprint

Blanco-Berdugo, L., Garretson, A., & Dumont, B. L. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.06.27.662069

Asxl1 regulates optic cup development through interaction with Lhx2 and epigenetic modulation of Wnt signaling

Moon, S., Kim, N., Kim, A.-R., Moon, K. H., Kim, J. W., & Um, S. (2025) · Animal Cells and Systems · doi:10.1080/19768354.2025.2542176

Unravelling High Nuclear Genomic Similarity and Mitochondria Linked Epigenetic Divergence in SCNT Derived Buffalo Clones via Long-Read Nanopore Genome Sequencing

Punetha, M., Kumar, D., Kumar, S., Magoo, B., Dahiya, P., Kumar, P., Sharma, R. K., Pal, Y., & Yadav, P. S. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26188836

Poising and connectivity of emergent human developmental enhancers in the transition from naive to primed pluripotency

Nocente, M. C., Rosa, M. D., Malcolm, A. A., Lister, G., Savin, I., Ray-Jones, H. F., Elderkin, S., Tian, R., Andrews, S., Bendall, A., et al. (2026) · Cell Reports · doi:10.1016/j.celrep.2026.117402

High-throughput functional characterization of enhancers in totipotent-like cells

Yang, L., Peng, T., Zhu, Y., Zhai, X., Huang, B., Zhou, H., Zhang, T., Li, L., Zhang, T., Cao, Y., et al. (2026) · Nature Communications · doi:10.1038/s41467-026-77311-8

Bmi1 controls auditory sensory epithelial cell proliferation through genome-wide H3K27me3 modifications

Lu, X., Zhang, Y., Dai, R., Wang, K., Lan, F., Yu, H., Zhao, L., Chai, R., & Sun, S. (2025) · Epigenetics & Chromatin · doi:10.1186/s13072-025-00642-1

Gene editing and multi-omics approaches to study early embryogenesis in cattle

Chen, C., Kassim, Y., Xu, X., He, X., Lin, H., Dang, Y., Shi, Y., Wang, H., Wang, S., & Zhang, K. (2025) · Reproduction Fertility and Development · doi:10.1071/rd25167

Additional file 1 of Epigenetic drug screening for trophoblast syncytialization reveals a novel role for MLL1 in regulating fetoplacental growth

Wu, J., Qin, C., Tian, F., Liu, X., Hu, J., Wu, F., Chen, C., & Lin, Y. (2024) · Figshare · doi:10.6084/m9.figshare.25150636

Additional file 1 of An integrated multi-omics approach to identify regulatory mechanisms in cancer metastatic processes

Ghaffari, S., Hanson, C. R., Schmidt, R. E., Bouchonville, K. J., Offer, S. M., & Sinha, S. (2021) · Figshare · doi:10.6084/m9.figshare.13545136

Additional file 1 of LncRNA AC142119.1 facilitates the progression of neuroblastoma by epigenetically initiating the transcription of MYCN

Yang, R., Liu, N., Li, T., Fangjie, L., Zhang, J., Zhao, H., Zou, L., & He, X. (2023) · Figshare · doi:10.6084/m9.figshare.24187880

Additional file 16 of Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

Zhao, L., Yang, Y., Chen, J., Lin, X., Zhang, H., Wang, H., Wang, H., Bie, X., Jiang, J., Feng, X., et al. (2023) · Figshare · doi:10.6084/m9.figshare.22611830

Additional file 3 of LncRNA AC142119.1 facilitates the progression of neuroblastoma by epigenetically initiating the transcription of MYCN

Yang, R., Liu, N., Li, T., Fangjie, L., Zhang, J., Zhao, H., Zou, L., & He, X. (2023) · Figshare · doi:10.6084/m9.figshare.24187886

Additional file 7 of Chromatin profiling and state predictions reveal insights into epigenetic regulation during early porcine development

Innis, S. M., & Cabot, R. A. (2024) · Figshare · doi:10.6084/m9.figshare.26723331

Additional file 5 of The impact of selective HDAC inhibitors on the transcriptome of early mouse embryos

SHAO, R., Suzuki, T., Suyama, M., & Tsukada, Y.-I. (2024) · Figshare · doi:10.6084/m9.figshare.26676947

Additional file 2 of The impact of selective HDAC inhibitors on the transcriptome of early mouse embryos

SHAO, R., Suzuki, T., Suyama, M., & Tsukada, Y.-I. (2024) · Figshare · doi:10.6084/m9.figshare.25150685

Additional file 6 of Chromatin profiling and state predictions reveal insights into epigenetic regulation during early porcine development

Innis, S. M., & Cabot, R. A. (2024) · Figshare · doi:10.6084/m9.figshare.26723328

Additional file 1 of Chromatin profiling and state predictions reveal insights into epigenetic regulation during early porcine development

Innis, S. M., & Cabot, R. A. (2024) · Figshare · doi:10.6084/m9.figshare.26723313

Additional file 1 of Prenatal and postnatal traffic pollution exposure, DNA methylation in Shank3 and MeCP2 promoter regions, H3K4me3 and H3K27me3 and sociability in rats’ offspring

Zhou, Q., Tian, Y., Xu, C., Wang, J., & Jin, Y. (2021) · Figshare · doi:10.6084/m9.figshare.16683102

Additional file 7 of The impact of selective HDAC inhibitors on the transcriptome of early mouse embryos

SHAO, R., Suzuki, T., Suyama, M., & Tsukada, Y.-I. (2024) · Figshare · doi:10.6084/m9.figshare.26676953

Additional file 1 of Comprehensive computational analysis of epigenetic descriptors affecting CRISPR-Cas9 off-target activity

Mak, J. K., Störtz, F., & Mináry, P. (2024) · Figshare · doi:10.6084/m9.figshare.26550874

Additional file 4 of LncRNA AC142119.1 facilitates the progression of neuroblastoma by epigenetically initiating the transcription of MYCN

Yang, R., Liu, N., Li, T., Fangjie, L., Zhang, J., Zhao, H., Zou, L., & He, X. (2023) · Figshare · doi:10.6084/m9.figshare.24187889

Additional file 1 of Masakari: visualization supported statistical analysis of genome segmentations

Zeckzer, D., Hausdorf, A., Hinzmann, N., Müller, L., & Wiegreffe, D. (2020) · Figshare · doi:10.6084/m9.figshare.13065785

Additional file 8 of The impact of selective HDAC inhibitors on the transcriptome of early mouse embryos

SHAO, R., Suzuki, T., Suyama, M., & Tsukada, Y.-I. (2024) · Figshare · doi:10.6084/m9.figshare.26676956

Additional file 4 of Chromatin profiling and state predictions reveal insights into epigenetic regulation during early porcine development

Innis, S. M., & Cabot, R. A. (2024) · Figshare · doi:10.6084/m9.figshare.26723322

Allelic reprogramming of the histone modification H3K4me3 in early mammalian development

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Panoramic views of the early epigenome

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Dang, Y., Luo, L., Shi, Y., Li, S., Wang, S., & Zhang, K. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.11.22.469629 · Cited by 1

Dynamic patterns of histone H3 lysine 4 methyltransferases and demethylases during mouse preimplantation development

Shao, G., Chen, J., Zhang, L., Huang, P., Lu, H., Jin, J., Gong, A., & Sang, J. (2014) · In Vitro Cellular & Developmental Biology - Animal · doi:10.1007/s11626-014-9741-6 · Cited by 47