The DOI matches its Crossref record; 27 of the 27 references it cites were found in a registry or an index.
Redefining the invertebrate RNA virosphere
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Citations
Cites
Fast gapped-read alignment with Bowtie 2
Langmead, B., & Salzberg, S. L. (2012) · Nature Methods · doi:10.1038/nmeth.1923 · Cited by 56,400
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Katoh, K., & Standley, D. M. (2013) · Molecular Biology and Evolution · doi:10.1093/molbev/mst010 · Cited by 46,209
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Grabherr, M. G., Haas, B. J., Yassour, M., Levin, J. Z., Thompson, D. A., Amit, I., Adiconis, X., Fan, L., Raychowdhury, R., Zeng, Q., et al. (2011) · Nature Biotechnology · doi:10.1038/nbt.1883 · Cited by 21,039
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
Guindon, S., & Gascuel, O. (2003) · Systematic Biology · doi:10.1080/10635150390235520 · Cited by 16,806
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Capella-Gutiérrez, S., Silla-Martínez, J. M., & Gabaldón, T. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp348 · Cited by 12,751
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
Thorvaldsdottir, H., Robinson, J. T., & Mesirov, J. P. (2013) · Briefings in Bioinformatics · doi:10.1093/bib/bbs017 · Cited by 9,049
ProtTest 3: fast selection of best-fit models of protein evolution
Darriba, D., Taboada, G. L., Doallo, R., & Posada, D. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr088 · Cited by 2,672
Suttle, C. A. (2005) · Nature · doi:10.1038/nature04160 · Cited by 2,176
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RNA-Seq gene expression estimation with read mapping uncertainty
Li, B., Ruotti, V., Stewart, R. M., Thomson, J. A., & Dewey, C. N. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btp692 · Cited by 1,198
Cited by
A new coronavirus associated with human respiratory disease in China
Wu, F., Zhao, S., Yu, B., Chen, Y.-M., Wang, W., Song, Z.-G., Hu, Y., Tao, Z.-W., Tian, J.-H., Pei, Y.-Y., et al. (2020) · Nature · doi:10.1038/s41586-020-2008-3 · Cited by 11,688
Self-citationThe evolutionary history of vertebrate RNA viruses
Shi, M., Lin, X.-D., Chen, X., Tian, J.-H., Chen, L.-J., Li, K., Wang, W., Eden, J.-S., Shen, J.-J., Liu, L., et al. (2018) · Nature · doi:10.1038/s41586-018-0012-7 · Cited by 774
Self-citationTowards a genomics-informed, real-time, global pathogen surveillance system
Gardy, J. L., & Loman, N. J. (2018) · Nature Reviews Genetics · doi:10.1038/nrg.2017.88 · Cited by 771
The pathobiome in animal and plant diseases.
Bass, D., Stentiford, G. D., Wang, H.-C., Koskella, B., & Tyler, C. R. (2019) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2019.07.012 · Cited by 376
Geoghegan, J. L., Duchêne, S., & Holmes, E. C. (2017) · PLOS Pathogens · doi:10.1371/journal.ppat.1006215 · Cited by 275
Self-citation
Metadata
- Authors
- Shi, M., Lin, X.-D., Tian, J.-H., Chen, L.-J., Chen, X., Li, C.-X., Qin, X.-C., Li, J., Cao, J.-P., Eden, J.-S., Buchmann, J., Wang, W., Xu, J., Holmes, E. C., & Zhang, Y.-Z.
- Venue
- Nature
- Published
- 2016-11-23
- Volume
- 540
- Issue
- 7634
- Pages
- 539-543
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- OpenAlex
- W2516022550
- Cited by
- 1,640
- References
- 27
- FWCI
- 115.56
- Type
- journal article
- Language
- en
- Open access
- closed
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- CoChat. (2026). Citation check: Redefining the invertebrate RNA virosphere. https://app.cochat.ai/papers/10.1038/nature20167
- The paper
- Shi, M., Lin, X.-D., Tian, J.-H., Chen, L.-J., Chen, X., Li, C.-X., Qin, X.-C., Li, J., Cao, J.-P., Eden, J.-S., Buchmann, J., Wang, W., Xu, J., Holmes, E. C., & Zhang, Y.-Z. (2016). Redefining the invertebrate RNA virosphere. Nature. https://doi.org/10.1038/nature20167
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
