Rab10 GTPase regulates ER dynamics and morphology
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RAB10 has been localized to multiple subcellular compartments in different cell types including the endoplasmic reticulum, trans Golgi network, early endosomes, recycling endosomes, phagosomes, and primary cilia.
“Consistent with this wide range of functions, RAB10 has been localized to multiple subcellular compartments in different cell types including the endoplasmic reticulum, trans Golgi network, early endosomes, recycling endosomes, phagosomes, and primary cilia (25, 31, 32, 50, 51, 52).”
From The small GTPase RAB10 regulates endosomal recycling of the LDL receptor and transferrin receptor in hepatocytes (2022) · cites this paper as [25]
In Results, ‘Rab10 localizes to the ER’ (page not provided), the paper reports Rab10 at the ER and Golgi, but does not specify the trans-Golgi network. It reports no localization to early or recycling endosomes in the Cos-7 cells tested, and does not address phagosomes or primary cilia. Because the claim spans different cell types, the Cos-7 result does not rule out localization elsewhere. (LLM, conf=0.88)
Experimental — accuracy not yet measuredRab10 localizes at ER membranes and plays a role in ER dynamics and maintaining morphology.
“Rab10 has been shown to localize at ER membranes and play a role in ER dynamics and maintaining morphology [17].”
From Cellular and subcellular localization of Rab10 and phospho-T73 Rab10 in the mouse and human brain (2023) · cites this paper as [17]
In neurons, RAB10 is involved in axonogenesis through the regulation of vesicular membrane trafficking toward the axonal plasma membrane.
“In neurons, RAB10 is involved in axonogenesis through the regulation of vesicular membrane trafficking toward the axonal plasma membrane [60].”
From Linkage, whole genome sequence, and biological data implicate variants in RAB10 in Alzheimer’s disease resilience (2017) · cites this paper as [60]
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Research works printed but not linked: 36
- Lee, C. & Chen, L. B. Dynamic behaviour of endoplasmic reticulum in living cells. Cell 54, 37–46 (1988). · DOI
- Terasaki, M., Chen, L. B. & Fujiwara, K. Microtubules and the endoplasmic reticulum are highly interdependent structures. J. Cell Biol. 103, 1557–1568 (1986). · DOI
- Waterman-Storer, C. M. & Salmon, E. D. Endoplasmic reticulum membrane tubules are distributed by microtubules in living cells using three distinct mechanisms. Curr. Biol. 8, 798–806 (1998). · DOI
- English, A. R., Zurek, N. & Voeltz, G. K. Peripheral ER structure and function. Curr. Opin. Cell Biol. 21, 596–602 (2009). · DOI
- Hu, J. et al. A class of dynamin-like GTPases involved in the generation of the tubular ER network. Cell 138, 549–561 (2009). · DOI
- Orso, G. et al. Homotypic fusion of ER membranes requires the dynamin-like GTPase atlastin. Nature 460, 978–983 (2009). · DOI
- Rismanchi, N., Soderblom, C., Stadler, J., Zhu, P. P. & Blackstone, C. Atlastin GTPases are required for Golgi apparatus and ER morphogenesis. Hum. Mol. Genet. 17, 1591–1604 (2008). · DOI
- Murray, J. T., Panaretou, C., Stenmark, H., Miaczynska, M. & Backer, J. M. Role of Rab5 in the recruitment of hVps34/p150 to the early endosome. Traffic 3, 416–427 (2002). · DOI · Paper page
- Behnia, R. & Munro, S. Organelle identity and the signposts for membrane traffic. Nature 438, 597–604 (2005). · DOI
- Pfeffer, S. R. Rab GTPases: specifying and deciphering organelle identity and function. Trends Cell Biol. 11, 487–491 (2001). · DOI
- Cai, H., Reinisch, K. & Ferro-Novick, S. Coats, tethers, Rabs, and SNAREs work together to mediate the intracellular destination of a transport vesicle. Dev. Cell 12, 671–682 (2007). · DOI
- Schwartz, S. L., Cao, C., Pylypenko, O., Rak, A. & Wandinger-Ness, A. Rab GTPases at a glance. J. Cell Sci. 120, 3905–3910 (2007). · DOI
- Turner, M. D., Plutner, H. & Balch, W.E. A Rab GTPase is required forhomotypic assembly of the endoplasmic reticulum. J. Biol. Chem. 272, 13479–13483 (1997). · DOI
- Audhya, A., Desai, A. & Oegema, K. A role for Rab5 in structuring the endoplasmic reticulum. J. Cell Biol. 178, 43–56 (2007). · DOI
- Dreier, L. & Rapoport, T. A. In vitro formation of the endoplasmic reticulum occurs independently of microtubules by a controlled fusion reaction. J. Cell Biol. 148, 883–898 (2000). · DOI
- Voeltz, G. K., Prinz, W. A., Shibata, Y., Rist, J. M. & Rapoport, T. A. A class of membrane proteins shaping the tubular endoplasmic reticulum. Cell 124, 573–586 (2006). · DOI
- Bucci, C., Thomsen, P., Nicoziani, P., McCarthy, J. & van Deurs, B. Rab7: a key to lysosome biogenesis. Mol. Biol. Cell 11, 467–480 (2000). · DOI
- Bucci, C. et al. Co-operative regulation of endocytosis by three Rab5 isoforms. FEBS Lett. 366, 65–71 (1995). · DOI
- Ullrich, O., Reinsch, S., Urbe, S., Zerial, M. & Parton, R. G. Rab11 regulates recycling through the pericentriolar recycling endosome. J. Cell Biol. 135, 913–924 (1996). · DOI
- Chen, W. & Wandinger-Ness, A. Expression and functional analyses of Rab8 and Rab11a in exocytic transport from trans-Golgi network. Methods Enzymol. 329, 165–175 (2001). · DOI
- Schuck, S. et al. Rab10 is involved in basolateral transport in polarized Madin-Darby canine kidney cells. Traffic 8, 47–60 (2007). · DOI · Paper page
- Shi, A. et al. EHBP-1 functions with RAB-10 during endocytic recycling in Caenorhabditis elegans. Mol. Biol. Cell 21, 2930–2943 (2010). · DOI
- Chen, C. C. et al. RAB-10 is required for endocytic recycling in the Caenorhabditis elegans intestine. Mol. Biol. Cell 17, 1286–1297 (2006). · DOI · Paper page
- Stenmark, H. et al. Inhibition of rab5 GTPase activity stimulates membrane fusion in endocytosis. EMBO J. 13, 1287–1296 (1994). · DOI · Paper page
- Shibata, Y. et al. Mechanisms determining the morphology of the peripheral ER. Cell 143, 774–788 (2010). · DOI
- Anderson, D. J. & Hetzer, M. W. Reshaping of the endoplasmic reticulum limits the rate for nuclear envelope formation. J. Cell Biol. 182, 911–924 (2008). · DOI
- Friedman, J. R., Webster, B. M., Mastronarde, D. N., Verhey, K. J. & Voeltz, G. K. ER sliding dynamics and ER-mitochondrial contacts occur on acetylated microtubules. J. Cell Biol. 190, 363–375 (2010). · DOI · Paper page
- Kim, Y. J., Guzman-Hernandez, M. L. & Balla, T. A highly dynamic ER-derived phosphatidylinositol-synthesizing organelle supplies phosphoinositides to cellular membranes. Dev. Cell 21, 813–824 (2011). · DOI
- Fagone, P. & Jackowski, S. Membrane phospholipid synthesis and endoplasmic reticulum function. J. Lipid Res. 50, S311–S316 (2009). · DOI
- Henneberry, A. L., Wright, M. M. & McMaster, C. R. The major sites of cellular phospholipid synthesis and molecular determinants of Fatty Acid and lipid head group specificity. Mol. Biol. Cell 13, 3148–3161 (2002). · DOI
- French, A. P., Mills, S., Swarup, R., Bennett, M. J. & Pridmore, T. P. Colocalization of fluorescent markers in confocal microscope images of plant cells. Nat. Protoc. 3, 619–628 (2008). · DOI
- Park, S. H., Zhu, P. P., Parker, R. L. & Blackstone, C. Hereditary spastic paraplegia proteins REEP1, spastin, and atlastin-1 coordinate microtubule interactions with the tubular ER network. J. Clin. Invest. 120, 1097–1110 (2010). · DOI
- Chen, S., Novick, P. & Ferro-Novick, S. ER network formation requires a balance of the dynamin-like GTPase Sey1p and the Lunapark family member Lnp1p. Nat. Cell Biol. (2012). · DOI
- Wenk, M. R. & De Camilli, P. Protein-lipid interactions and phosphoinositide metabolism in membrane traffic: insights from vesicle recycling in nerve terminals. Proc. Natl Acad. Sci. USA 101, 8262–8269 (2004). · DOI
- Zurek, N., Sparks, L. & Voeltz, G. Reticulon short hairpin transmembrane domains are used to shape ER tubules. Traffic 12, 28–41 (2011). · DOI
- Sahooa, P. K. & Arorab, G. A thresholding method based on two-dimensional Renyi’s entropy. Pattern Recognition 37, 1149–1161 (2004). · DOI
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Metadata
- Authors
- English, A. R., & Voeltz, G. K.
- Venue
- Nature Cell Biology
- Published
- 2012-12-23
- Volume
- 15
- Issue
- 2
- Pages
- 169-178
- ISSN
- 1465-7392
- 1476-4679
- PMC
- PMC3582403
- Cited by
- 224
- References
- 0
- Language
- en
- Licence
- www.springer.com/tdm (tdm)
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