The DOI matches its Crossref record; 4 of the 4 references it cites were found in a registry or an index.
Capturing the essence of folding and functions of biomolecules using coarse-grained models
Open accessAbstract
The distances over which biological molecules and their complexes can function range from a few nanometres, in the case of folded structures, to millimetres, for example, during chromosome organization. Describing phenomena that cover such diverse length, and also time, scales requires models that capture the underlying physics for the particular length scale of interest. Theoretical ideas, in particular, concepts from polymer physics, have guided the development of coarse-grained models to study folding of DNA, RNA and proteins. More recently, such models and their variants have been applied to the functions of biological nanomachines. Simulations using coarse-grained models are now poised to address a wide range of problems in biology.
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Citations
Cites
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“Kinesins: Kinesins are motors that transport cellular organelles along the network of cytoskeletal filaments [80, 87, 88].”
BackgroundMinton, A. P. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.r100005200 · Cited by 1,474 · cited 1×
“(1990).”
Dill, K. A., Ozkan, S. B., Shell, M. S., & Weikl, T. R. (2008) · Annual Review of Biophysics · doi:10.1146/annurev.biophys.37.092707.153558 · Cited by 1,163
Internal strain regulates the nucleotide binding site of the kinesin leading head
Hyeon, C., & Onuchic, J. N. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0610939104 · Cited by 141
Self-citation
Cited by
Perspective: Coarse-grained models for biomolecular systems
Noid, W. G. (2013) · The Journal of Chemical Physics · doi:10.1063/1.4818908 · Cited by 893
Martini coarse-grained force field: Extension to RNA
Uusitalo, J. J., Ingólfsson, H. I., Marrink, S. J., & Faustino, I. (2017) · Biophysical Journal · doi:10.1016/j.bpj.2017.05.043 · Cited by 259
Efficient search, mapping, and optimization of multi-protein genetic systems in diverse bacteria
Farasat, I., Kushwaha, M., Collens, J., Easterbrook, M., Guido, M., & Salis, H. M. (2014) · Molecular Systems Biology · doi:10.15252/msb.20134955 · Cited by 235
Binding without folding – the biomolecular function of disordered polyelectrolyte complexes
Schuler, B., Borgia, A., Borgia, M. B., Heidarsson, P. O., Holmstrom, E. D., Nettels, D., & Sottini, A. (2020) · Current Opinion in Structural Biology · doi:10.1016/j.sbi.2019.12.006 · Cited by 91
Electron-transfer chain in respiratory complex I
Martin, D. R., & Matyushov, D. V. (2017) · Scientific Reports · doi:10.1038/s41598-017-05779-y · Cited by 63
Metadata
- Authors
- Hyeon, C., & Thirumalai, D.
- Venue
- Nature Communications
- Published
- 2011-09-27
- Volume
- 2
- Issue
- 1
- Pages
- 487-487
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W1993085892
- Cited by
- 242
- References
- 4
- FWCI
- 8.35
- Type
- journal article
- Language
- en
- Open access
- bronze
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