The DOI matches its Crossref record; 5 of the 5 references it cites were found in a registry or an index.
Single-virus genomics reveals hidden cosmopolitan and abundant viruses
Open accessAbstract
Microbes drive ecosystems under constraints imposed by viruses. However, a lack of virus genome information hinders our ability to answer fundamental, biological questions concerning microbial communities. Here we apply single-virus genomics (SVGs) to assess whether portions of marine viral communities are missed by current techniques. The majority of the here-identified 44 viral single-amplified genomes (vSAGs) are more abundant in global ocean virome data sets than published metagenome-assembled viral genomes or isolates. This indicates that vSAGs likely best represent the dsDNA viral populations dominating the oceans. Species-specific recruitment patterns and virome simulation data suggest that vSAGs are highly microdiverse and that microdiversity hinders the metagenomic assembly, which could explain why their genomes have not been identified before. Altogether, SVGs enable the discovery of some of the likely most abundant and ecologically relevant marine viral species, such as vSAG 37-F6, which were overlooked by other methodologies.
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The human gut virome: inter-individual variation and dynamic response to diet
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Explaining Microbial Population Genomics through Phage Predation
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Phage diversity, genomics and phylogeny
Dion, M. B., Oechslin, F., & Moineau, S. (2020) · Nature Reviews Microbiology · doi:10.1038/s41579-019-0311-5 · Cited by 960
Marine DNA Viral Macro- and Microdiversity from Pole to Pole
Gregory, A. C., Zayed, A. A., Conceição-Neto, N., Temperton, B., Bolduc, B., Alberti, A., Ardyna, M., Arkhipova, K., Carmichael, M., Cruaud, C., et al. (2019) · Cell · doi:10.1016/j.cell.2019.03.040 · Cited by 826
Self-citationBacteriophages of the Human Gut: The “Known Unknown” of the Microbiome
Shkoporov, A. N., & Hill, C. (2019) · Cell Host & Microbe · doi:10.1016/j.chom.2019.01.017 · Cited by 767
Minimum Information about an Uncultivated Virus Genome (MIUViG)
Roux, S., Adriaenssens, E. M., Dutilh, B. E., Koonin, E. V., Kropinski, A. M., Krupovic, M., Kuhn, J. H., Lavigne, R., Brister, J. R., Varsani, A., et al. (2019) · Nature Biotechnology · doi:10.1038/nbt.4306 · Cited by 732
Self-citationTara Oceans: towards global ocean ecosystems biology
Sunagawa, S., Acinas, S. G., Bork, P., Bowler, C., Coordinators, T. O., Acinas, S. G., Babin, M., Bork, P., Boss, E., Bowler, C., et al. (2020) · Nature Reviews Microbiology · doi:10.1038/s41579-020-0364-5 · Cited by 490
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Metadata
- Authors
- Martinez-Hernandez, F., Fornas, O., Lluesma Gomez, M., Bolduc, B., de la Cruz Peña, M. J., Martínez, J. M., Anton, J., Gasol, J. M., Rosselli, R., Rodriguez-Valera, F., Sullivan, M. B., Acinas, S. G., & Martinez-Garcia, M.
- Venue
- Nature Communications
- Published
- 2017-06-23
- Volume
- 8
- Issue
- 1
- Pages
- 15892-15892
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W2638784546
- Cited by
- 208
- References
- 5
- FWCI
- 14.63
- Type
- journal article
- Language
- en
- Open access
- gold
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