The DOI matches its Crossref record; 37 of the 37 references it cites were found in a registry or an index.
Control of cotton fibre elongation by a homeodomain transcription factor GhHOX3
Open accessAbstract
Cotton fibres are unusually long, single-celled epidermal seed trichomes and a model for plant cell growth, but little is known about the regulation of fibre cell elongation. Here we report that a homeodomain-leucine zipper (HD-ZIP) transcription factor, GhHOX3, controls cotton fibre elongation.GhHOX3 genes are localized to the 12th homoeologous chromosome set of allotetraploid cotton cultivars, associated with quantitative trait loci (QTLs) for fibre length. Silencing of GhHOX3 greatly reduces (>80%) fibre length, whereas its overexpression leads to longer fibre. Combined transcriptomic and biochemical analyses identify target genes of GhHOX3 that also contain the L1-box cis-element, including two cell wall loosening protein genes GhRDL1 and GhEXPA1. GhHOX3 interacts with GhHD1, another homeodomain protein, resulting in enhanced transcriptional activity, and with cotton DELLA, GhSLR1, repressor of the growth hormone gibberellin (GA). GhSLR1 interferes with the GhHOX3–GhHD1 interaction and represses target gene transcription. Our results uncover a novel mechanism whereby a homeodomain protein transduces GA signal to promote fibre cell elongation.
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Mapping and quantifying mammalian transcriptomes by RNA-Seq
Mortazavi, A., Williams, B. A., McCue, K., Schaeffer, L., & Wold, B. (2008) · Nature Methods · doi:10.1038/nmeth.1226 · Cited by 13,696
The control of the false discovery rate in multiple testing under dependency
Benjamini, Y., & Yekutieli, D. (2001) · The Annals of Statistics · doi:10.1214/aos/1013699998 · Cited by 10,490
SOAP2: an improved ultrafast tool for short read alignment
Li, R., Yu, C., Li, Y., Lam, T.-W., Yiu, S.-M., Kristiansen, K., & Wang, J. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp336 · Cited by 3,760
Firefly Luciferase Complementation Imaging Assay for Protein-Protein Interactions in Plants
Chen, H., Zou, Y., Shang, Y., Lin, H., Wang, Y., Cai, R., Tang, X., & Zhou, J.-M. (2008) · Plant Physiology · doi:10.1104/pp.107.111740 · Cited by 1,525
Mao, Y.-B., Cai, W.-J., Wang, J.-W., Hong, G.-J., Tao, X.-Y., Wang, L.-J., Huang, Y.-P., & Chen, X.-Y. (2007) · Nature Biotechnology · doi:10.1038/nbt1352 · Cited by 1,358
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres
Paterson, A. H., Wendel, J. F., Gundlach, H., Guo, H., Jenkins, J., Jin, D., Llewellyn, D., Showmaker, K. C., Shu, S., Udall, J., et al. (2012) · Nature · doi:10.1038/nature11798 · Cited by 1,332
Self-citationA molecular framework for light and gibberellin control of cell elongation
de Lucas, M., Davière, J.-M., Rodríguez-Falcón, M., Pontin, M., Iglesias-Pedraz, J. M., Lorrain, S., Fankhauser, C., Blázquez, M. A., Titarenko, E., & Prat, S. (2008) · Nature · doi:10.1038/nature06520 · Cited by 1,319
PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors
Jin, J., Zhang, H., Kong, L., Gao, G., & Luo, J. (2014) · Nucleic Acids Research · doi:10.1093/nar/gkt1016 · Cited by 963
Gou, J.-Y., Felippes, F. F., Liu, C.-J., Weigel, D., & Wang, J.-W. (2011) · The Plant Cell · doi:10.1105/tpc.111.084525 · Cited by 953
A rapid CTAB DNA isolation technique useful for RAPD fingerprinting and other PCR applications.
Stewart, C. N., & Via, L. E. (1993) · PubMed · Cited by 913
Cited by
An Updated Overview on the Regulation of Seed Germination
Carrera-Castaño, G., Calleja-Cabrera, J., Pernas, M., Gómez, L., & Oñate-Sánchez, L. (2020) · Plants · doi:10.3390/plants9060703 · Cited by 269
Metadata
- Authors
- Shan, C.-M., Shangguan, X.-X., Zhao, B., Zhang, X.-F., Chao, L.-M., Yang, C.-Q., Wang, L.-J., Zhu, H.-Y., Zeng, Y.-D., Guo, W.-Z., Zhou, B.-L., Hu, G.-J., Guan, X.-Y., Chen, Z. J., Wendel, J. F., Zhang, T.-Z., & Chen, X.-Y.
- Venue
- Nature Communications
- Published
- 2014-11-21
- Volume
- 5
- Issue
- 1
- Pages
- 5519-5519
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W2035523956
- Cited by
- 296
- References
- 37
- FWCI
- 14.78
- Type
- journal article
- Language
- en
- Open access
- hybrid
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- Shan, C.-M., Shangguan, X.-X., Zhao, B., Zhang, X.-F., Chao, L.-M., Yang, C.-Q., Wang, L.-J., Zhu, H.-Y., Zeng, Y.-D., Guo, W.-Z., Zhou, B.-L., Hu, G.-J., Guan, X.-Y., Chen, Z. J., Wendel, J. F., Zhang, T.-Z., & Chen, X.-Y. (2014). Control of cotton fibre elongation by a homeodomain transcription factor GhHOX3. Nature Communications. https://doi.org/10.1038/ncomms6519
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