Advantages and pitfalls in the application of mixed-model association methods

Yang, Jian, Zaitlen, Noah A, Goddard, Michael E, Visscher, Peter M, Price, Alkes L·2014·Nature Genetics

DOI 10.1038/ng.2876

Cited by (1,001)

Items 901–1,000 of 1,001

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Additional file 10 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
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Additional file 8 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
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Additional file 1 of Identification of eQTLs using different sets of single nucleotide polymorphisms associated with carcass and body composition traits in pigs
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Additional file 5 of Variants at the ASIP locus contribute to coat color darkening in Nellore cattle
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Additional file 4 of Inferring cell-type-specific causal gene regulatory networks during human neurogenesis
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Additional file 2 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
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Additional file 1 of Coupled mixed model for joint genetic analysis of complex disorders with two independently collected data sets
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Additional file 3 of Genetic background of juniper (Juniperus spp.) consumption predicted by fecal near-infrared spectroscopy in divergently selected goats raised in harsh rangeland environments
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Additional file 5 of Identification of eQTLs using different sets of single nucleotide polymorphisms associated with carcass and body composition traits in pigs
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Additional file 6 of Identification of eQTLs using different sets of single nucleotide polymorphisms associated with carcass and body composition traits in pigs
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Additional file 1 of Investigating the genetic components of tuber bruising in a breeding population of tetraploid potatoes
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Additional file 5 of Inferring cell-type-specific causal gene regulatory networks during human neurogenesis
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Additional file 12 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
Paula Reich, Sandra Möller, Stock, Kathrin F., Wietje Nolte, Mario Von Depka Prondzinski, Reinhard Reents, Ernst Kalm, Christa Kühn, Thaller, Georg, Clemens Falker‐Gieske et al. · 2024 · Figshare
Additional file 3 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
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Additional file 3 of Summary-data based Mendelian randomization identifies gene expression regulatory polymorphisms associated with bovine paratuberculosis by modulation of the nuclear factor Kappa β (NF-κß)-mediated inflammatory response
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Additional file 1 of Sex and statin-related genetic associations at the PCSK9 gene locus: results of genome-wide association meta-analysis
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Additional file 3 of A Capra hircus chromosome 19 locus linked to milk production influences mammary conformation
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Additional file 1 of A Capra hircus chromosome 19 locus linked to milk production influences mammary conformation
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Additional file 7 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
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Additional file 4 of Sequence level genome-wide associations for bull production and fertility traits in tropically adapted bulls
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Additional file 2 of Summary-data based Mendelian randomization identifies gene expression regulatory polymorphisms associated with bovine paratuberculosis by modulation of the nuclear factor Kappa β (NF-κß)-mediated inflammatory response
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Additional file 1 of Variants at the ASIP locus contribute to coat color darkening in Nellore cattle
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Genetic control of local mutation rates.
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Additional file 4 of Identification of eQTLs using different sets of single nucleotide polymorphisms associated with carcass and body composition traits in pigs
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Additional file 1 of Mitochondrial sequence variants: testing imputation accuracy and their association with dairy cattle milk traits
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Additional file 2 of Genetic and genomic analysis of reproduction traits in holstein cattle using SNP chip data and imputed sequence level genotypes
Leopold Schwarz, Ana-Marija Križanac, Helen Schneider, Clemens Falker‐Gieske, Johannes Heise, Zengting Liu, Jörn Bennewitz, Thaller, Georg, Jens Tetens · 2024 · Figshare
Additional file 4 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
Paula Reich, Sandra Möller, Stock, Kathrin F., Wietje Nolte, Mario Von Depka Prondzinski, Reinhard Reents, Ernst Kalm, Christa Kühn, Thaller, Georg, Clemens Falker‐Gieske et al. · 2024 · Figshare
Additional file 2 of Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle
Claire Prowse-Wilkins, Thomas Lopdell, Ruidong Xiang, Christy J. Vander-Jagt, Mathew D. Littlejohn, Amanda Jane Chamberlain, Michael Edward Goddard · 2023 · Figshare
Additional file 3 of Identification of eQTLs using different sets of single nucleotide polymorphisms associated with carcass and body composition traits in pigs
Felipe André Oliveira Freitas, Brito, Luiz F., Simara Larissa Fanalli, Janaína Lustosa Gonçales, Bruna Pereira Martins da Silva, Mariah Castro Durval, Fernanda Nery Ciconello, Camila Sabino de Oliveira, Lucas Echevarria Nascimento, Izally Carvalho Gervásio et al. · 2024 · Figshare
Additional file 3 of Sequence level genome-wide associations for bull production and fertility traits in tropically adapted bulls
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Additional file 3 of Novel genetic markers for chronic kidney disease in a geographically isolated population of Indigenous Australians: Individual and multiple phenotype genome-wide association study
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Additional file 2 of Identification of eQTLs using different sets of single nucleotide polymorphisms associated with carcass and body composition traits in pigs
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Additional file 6 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
Paula Reich, Sandra Möller, Stock, Kathrin F., Wietje Nolte, Mario Von Depka Prondzinski, Reinhard Reents, Kalm, Ernst, Christa Kühn, Thaller, Georg, Clemens Falker‐Gieske et al. · 2024 · Figshare
Additional file 4 of Genetic background of juniper (Juniperus spp.) consumption predicted by fecal near-infrared spectroscopy in divergently selected goats raised in harsh rangeland environments
Henrique A. Mulim, John Withers Walker, Daniel F. Waldron, Danilo Gusmão de Quadros, Lorena Ferreira Benfica, de Carvalho, Felipe E., Brito, Luiz F. · 2024 · Figshare
Additional file 5 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
Paula Reich, Sandra Möller, Stock, Kathrin F., Wietje Nolte, Mario Von Depka Prondzinski, Reinhard Reents, Ernst Kalm, Christa Kühn, Thaller, Georg, Clemens Falker‐Gieske et al. · 2024 · Figshare
Additional file 1 of Inferring cell-type-specific causal gene regulatory networks during human neurogenesis
Nil Aygün, Dan Liang, Wesley L. Crouse, Gregory R. Keele, Love, Michael I., Jason L. Stein · 2024 · Figshare
Additional file 4 of Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle
Claire Prowse-Wilkins, Thomas Lopdell, Ruidong Xiang, Christy J. Vander-Jagt, Mathew D. Littlejohn, Amanda Jane Chamberlain, Michael Edward Goddard · 2023 · Figshare
Additional file 1 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
Paula Reich, Sandra Möller, Stock, Kathrin F., Wietje Nolte, Mario Von Depka Prondzinski, Reinhard Reents, Ernst Kalm, Christa Kühn, Thaller, Georg, Clemens Falker‐Gieske et al. · 2024 · Figshare
Additional file 3 of Inferring cell-type-specific causal gene regulatory networks during human neurogenesis
Nil Aygün, Dan Liang, Wesley L. Crouse, Gregory R. Keele, Love, Michael I., Jason L. Stein · 2024 · Figshare
Additional file 1 of Novel genetic markers for chronic kidney disease in a geographically isolated population of Indigenous Australians: Individual and multiple phenotype genome-wide association study
Vignesh Arunachalam, Rod A. Lea, Wendy E. Hoy, Simon Lee, Susan Anne Mott, Judy Savige, John D. Mathews, Brendan John McMorran, Shivashankar Hiriyur Nagaraj · 2024 · Figshare
Additional file 3 of Genetic variation in histone modifications and gene expression identifies regulatory variants in the mammary gland of cattle
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Additional file 2 of Inferring cell-type-specific causal gene regulatory networks during human neurogenesis
Nil Aygün, Dan Liang, Wesley L. Crouse, Gregory R. Keele, Love, Michael I., Stein, Jason L. · 2024 · Figshare
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Additional file 2 of Investigating the genetic components of tuber bruising in a breeding population of tetraploid potatoes
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Additional file 11 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
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Additional file 2 of Novel genetic markers for chronic kidney disease in a geographically isolated population of Indigenous Australians: Individual and multiple phenotype genome-wide association study
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Additional file 9 of Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes
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Multiancestral GWAS of Dental Malocclusion Identifies Multiple Risk Loci
Azeez Arisekola Alade, J.M. Maurer, Joel Anderton, M.-K. Lee, Konstantinia Almpani, S. Goovaerts, Peter D. Claes, Azeez Butali, A. Adeyemo, S. Levy et al. · 2026 · Journal of Dental Research
Caenorhabditis becei recombinant inbred lines (beRILs) reveal the scope of heritable variation within a gonochoristic nematode population
Tom Parée, Jose Salome Correa, Derin Çağlar, Jacqueline L. Jackson, Arielle Martel, Tuc H. M. Nguyen, Sophie Vallance, Matthew V. Rockman · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
Genome‐Wide Association Study of Nevus Count Reveals Opposing Effects of Genetic Loci Near IRF4 and MC1R on Flat Versus Raised Nevus Count in the Brisbane Twin Nevus Study: A Cross‐Sectional Analysis
Nathan Ingold, Gu Zhu, David L. Duffy, Adam Mothershaw, Nicholas G. Martin, Stuart MacGregor, Matthew H. Law · 2026 · Pigment Cell & Melanoma Research
Combinatorial multiomic analysis from a pedigree of Sox10Dom Hirschsprung mice identifies multiple high confidence candidate modifiers of Enteric Nervous System development
Joseph T. Benthal, Justin A. Avila, Jeffrey R. Smith, E. Michelle Southard‐Smith · 2026 · PLoS Computational Biology