The DOI matches its Crossref record; 25 of the 25 references it cites were found in a registry or an index.
Bayesian inference of ancient human demography from individual genome sequences
Open accessAbstract
Whole-genome sequences provide a rich source of information about human evolution. Here we describe an effort to estimate key evolutionary parameters based on the whole-genome sequences of six individuals from diverse human populations. We used a Bayesian, coalescent-based approach to obtain information about ancestral population sizes, divergence times and migration rates from inferred genealogies at many neutrally evolving loci across the genome. We introduce new methods for accommodating gene flow between populations and integrating over possible phasings of diploid genotypes. We also describe a custom pipeline for genotype inference to mitigate biases from heterogeneous sequencing technologies and coverage levels. Our analysis indicates that the San population of southern Africa diverged from other human populations approximately 108–157 thousand years ago, that Eurasians diverged from an ancestral African population 38–64 thousand years ago, and that the effective population size of the ancestors of all modern humans was ∼9,000.
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Inference of population splits and mixtures from genome-wide allele frequency data
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The Simons Genome Diversity Project: 300 genomes from 142 diverse populations
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Inferring human population size and separation history from multiple genome sequences
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A genetic atlas of human admixture history
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Metadata
- Authors
- Gronau, I., Hubisz, M. J., Gulko, B., Danko, C. G., & Siepel, A.
- Venue
- Nature Genetics
- Published
- 2011-09-18
- Volume
- 43
- Issue
- 10
- Pages
- 1031-1034
- ISSN
- 1061-4036 (ISSN-L)
- 1546-1718
- OpenAlex
- W2021540124
- Cited by
- 595
- References
- 25
- FWCI
- 19.55
- Type
- journal article
- Language
- en
- Open access
- green
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- Gronau, I., Hubisz, M. J., Gulko, B., Danko, C. G., & Siepel, A. (2011). Bayesian inference of ancient human demography from individual genome sequences. Nature Genetics. https://doi.org/10.1038/ng.937
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