MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics
Ting, Lily, Rad, Ramin, Gygi, Steven P, Haas, Wilhelm·2011·Nature Methods
Cited by (1,000)
Items 801–900 of 1,000
- Robust, Reproducible, and Economical Phosphopeptide Enrichment Using Calcium TitanateAdnan Ahmed, Vijay Joseph Raja, Paola Cavaliere, Noah Dephoure · 2018 · Journal of Proteome Research
- Studying Autophagy Using a TMT-Based Quantitative Proteomics ApproachKiran Bala Sharma, Suruchi Aggarwal, Amit Kumar Yadav, Sudhanshu Vrati, Manjula Kalia · 2022 · Methods in molecular biology
- Quantitative proteomics in development of disease protein biomarkersLei Wang, Adam J. McShane, Mary Joan Castillo, Xudong Yao · 2019 · Elsevier eBooks
- Activity‐Based Protein ProfilingNattawadee Panyain, Cassandra R. Kennedy, Ryan T. Howard, Edward W. Tate · 2019 · Methods and principles in medicinal chemistry
- Multiplexed fractionated proteomics reveals synaptic factors associated with cognitive resilience in Alzheimer's DiseaseBecky Catherine Carlyle, Savannah E. Kandigian, Johannes Kreuzer, Sudeshna Das, Bianca A. Trombetta, Yikai Kuo, David Alan Bennett, Julie A. Schneider, Vladislav Petyuk, Robert R. Kitchen et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
- Data Descriptor: Proteomic profiling across breast cancer cell lines and modelsMarian Kalocsay, Matthew J. Berberich, Robert A. Everley, Maulik K. Nariya, Mirra Chung, Benjamin L. Gaudio, Chiara Victor, Gary Andrew Bradshaw, Marc A. Hafner, Peter Karl Sorger et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
- Cell type and subcellular compartment specific APEX2 proximity labeling proteomics in the mouse brainVasin Dumrongprechachan, Giulia Soto, Matthew L. MacDonald, Yevgenia Kozorovitskiy · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Transitions in the proteome and phospho-proteome during Xenopus laevis developmentElizabeth Van Itallie, Matthew Sonnett, Marian Kalocsay, Martin Wühr, Leonid Peshkin, Marc W. Kirschner · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Protein interactome homeostasis through an N-recognin E3 ligase is a vulnerability in aneuploid cancerMeena Kathiresan, Sambhavi Animesh, Robert Tyler Morris, Johannes Kreuzer, Krushna Chandra Patra, Lei Shi, Joshua Merritt, Xunqin Yin, Cyril H. Benes, Nabeel M. Bardeesy et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- ZMYND11 Restrains KMT2A to Enable a Neuronal Developmental ProgramAlexander W. Greben, Xiaoli Wu, Josephine E. Robb, Ian R. Vogel, Lisa Traunmüller, Sebastian Krüttner, Kara A. Fulton, Migue Van Louis Darcera, Eric C. Griffith, Michael E. Greenberg · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Proteomic Analysis of Mechanical Injury Effects in Papaya Fruit at Two Maturity StagesFrancisco Antonio Reyes-Soria, Eliel Ruíz-May, Enrique Castaño, Miguel Ángel Herrera-Alamillo, José M. Elizalde‐Contreras, Samuel David Gamboa-Tuz, L. F. E. Huerta-Núñez, Jesús Alejandro Zamora‐Briseño, Luis Carlos Rodríguez‐Zapata · 2025 · Proteomes
- Data Processing and Analysis in Positional ProteomicsA. M. Haack, K. Kalogeropoulos · 2025 · Proteomics
- Short-Term and Long-Term Sensitization Differentially Alters the Composition of an Anterograde Transport Complex inAplysiaAbhishek Sadhu, Kerriann K. Badal, Yibo Zhao, Adia A. Ali, Supriya Swarnkar, George Tsaprailis, Gogce C. Crynen, Sathyanarayanan V. Puthanveettil · 2022 · eNeuro
- Motif-Targeting Phosphoproteome Analysis of Cancer Cells for Profiling Kinase InhibitorsKosuke Ogata, Shunsuke Takagi, Naoyuki Sugiyama, Yasushi Ishihama · 2022 · Cancers
- A Bioconductor workflow for processing, evaluating, and interpreting expression proteomics dataCharlotte Hutchings, Charlotte S. Dawson, Thomas Krueger, Kathryn Susan Lilley, Lisa M. Breckels · 2024 · F1000Research
- HDL proteome: from its characterization to quantitative measurements in particle subspecies and functional associationsTomáš Vaisar, Graziella E. Ronsein · 2025 · Expert Review of Proteomics
- Quantitative Proteomics Reveals Remodeling of Protein Repertoire Across Life Phases of Daphnia pulexLeonid Peshkin, Myriam Boukhali, Wilhelm Haas, Marc W. Kirschner, Lev Y. Yampolsky · 2019 · PROTEOMICS
- Advances in Mass Spectrometry-Based Proteomics and Its Application in Cancer ResearchMarkus Hardt · 2019 · Springer eBooks
- Comparison of LFQ and IPTL for Protein Identification and Relative QuantificationChristina Johannsen, Christian Jeffrey Koehler, Bernd Thiede · 2021 · Molecules
- The Emerging Potential of Advanced Targeted Mass Spectrometry to Become a Routine Tool for Protein Quantification in Biomedical ResearchAlexander Schmidt, Minia Antelo-Varela · 2022 · CHIMIA International Journal for Chemistry
- Proteomic-based evidence for adult neurogenesis in birds and mammals as indicated from cerebrospinal fluidEleni Voukali, Michal Vinkler · 2022 · Neural Regeneration Research
- Segmented MS/MS acquisition of a1 ion-based strategy for in-depth proteome quantitationZhiting Wang, Chao Liu, Songduo Wang, Xinhang Hou, Pengyun Gong, Xiao Li, Zhen Liang, Jianhui Liu, Lihua Zhang, Yukui Zhang · 2022 · Analytica Chimica Acta
- Surfaceome Profiling Identifies Basigin‐Chaperoned Protein ClientsZak Vilen, Eugene Joeh, Elizabeth Lee, Mia L. Huang · 2023 · ChemBioChem
- Development of novel isobaric tags enables accurate and sensitive multiplexed proteomics using complementary ionsMiyang Li, Mengyao Ma, Lingjun Li · 2023 · Analytical and Bioanalytical Chemistry
- An Efficient, Amine-Specific, and Cost-Effective Method for TMT 6/11-plex Labeling Improves the Proteome Coverage, Quantitative Accuracy and PrecisionYan Cai, Chenchen Chang, Qin Yang, Rijing Liao · 2024 · Journal of Proteome Research
- Proteomic Profiling of Medullary Thyroid Cancer Identifies CAPN1 as a Key Regulator of NF1 and RET Fueled GrowthEshan Khan, Hannah Hylton, Neel Rajan, Stephanie J. Bouley, Jalal Siddiqui, Swetha Rajasekaran, Ganesh R. Koshre, Hayden Storts, Anisley Valenciaga, Misbah Khan et al. · 2025 · Thyroid
- Transitions in the proteome and phospho-proteome during Xenopus laevis developmentElizabeth S. Van Itallie, Matthew Sonnett, Marian Kalocsay, Martin Wühr, Leonid Peshkin, Marc W. Kirschner · 2025 · Developmental Biology
- Categorization of Phosphorylation Site Behavior during the Diauxic Shift in Saccharomyces cerevisiaeBrandon M. Gassaway, João A. Paulo, Steven P. Gygi · 2021 · Journal of Proteome Research
- Mass spectrometric approaches for profiling protein folding and stabilityJoseph C. Genereux · 2019 · Advances in protein chemistry and structural biology
- Diverse Hotspot Thermal Profiling Methods Detect Phosphorylation-Dependent Changes in Protein StabilityBenjamin D. Stein, Jun Huang, David Wu, Lewis C. Cantley, Raymond E. Moellering · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- The p97-UBXD8 complex modulates ER-Mitochondria contact sites by modulating membrane lipid saturation and compositionRakesh Ganji, João A. Paulo, Yuecheng Xi, Ian Kline, Jiang Zhu, Christoph Stephan Clemen, Conrad Chris Weihl, John G. Purdy, Steven P. Gygi, Malavika Raman · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Neutrophil Profiles of Pediatric COVID-19 and Multisystem Inflammatory Syndrome in ChildrenBrittany P. Boribong, Thomas James LaSalle, Yannic C. Bartsch, Felix E. Ellett, Maggie Loiselle, Jameson P. Davis, Anna L. K. Gonye, Soroush Hajizadeh, Johannes Kreuzer, Shiv S Pillai et al. · 2022 · SSRN Electronic Journal
- The Molecular Architecture of Variable Lifespan in Diversity Outbred MiceSean R. Hackett, Majed Mohamed Magzoub, Tobias M Maile, Ngoc Vu, Kevin M. Wright, Eugene Melamud, Wilhelm Haas, Fiona Elizabeth McAllister, Gary A. Churchill, Bryson D. Bennett · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- N-acetyl-l-leucine lowers pS129-synuclein and improves synaptic function in models of Parkinson’s diseasePingping Song, Rossella Franchini, Chuyu Chen, Bryan Duong, Yizhi Wang, Jeffrey N. Savas, Loukia Parisiadou, Dimitri Krainc · 2025 · Research Square
- Global Analysis of Aggregation Determinants in Small Protein DomainsCydney M. Martell, Kamil K. Gebis, Han My Van, Yulia M. Gutierrez, Michelle D. Jung, Jeffrey N. Savas, Gabriel J. Rocklin · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- In situ global mapping of protein perturbations via protein abundance and conformation analysisYi Li, Xingchao Yang, Fei Zheng, Hanqing Zhang, Chang Shao, Ning Wan, Haiping Hao, Hui Ye · 2025 · Analytica Chimica Acta
- Methodological Aspects of μLC-MS/MS for Wide-Scale Proteomic Analysis of Anthracycline-Induced CardiomyopathyRudolf Kupčík, Olga Lenčová-Popelová, Yvona Mazurová, Martin Štěrba, Marie Vajrychová · 2025 · ACS Omega
- Disruption of P. falciparum amino acid transporter elevates intracellular proline and induces resistance to Prolyl-tRNA synthetase inhibitorsSelina E. R. Bopp, Lọla Fagbami, Amy Deik, Claudia Taccheri, Akansha Pant, Madeline R. Luth, Daisy Chen, Mark A. Tye, Imran Ullah, Johannes Kreuzer et al. · 2025 · Cell chemical biology
- Evaluating the Robustness of Micro-Pillar Array Columns for Quantitative Proteomics ApplicationsChristina B. Schroeter, Ting-Yu Wei, João A. Paulo · 2025 · Journal of Proteome Research
- RB loss modulates chromatin organization by regulating cohesin-dependent loops and enhancer-promoter interactionsHanjun Lee, Ioanna‐Maria Gkotinakou, Connor G. McGrath, Badri Krishnan, Sambhavi Animesh, Isabella Salinas, Robert Morris, Moshe Sade-Feldman, Wilhelm Hass, Michael S. Lawrence et al. · 2026 · Nature Communications
- In Depth Characterization of the Promoter Proximal Proteome of Single Copy Locus FOXP2Tim M.G. MacKenzie, Lucia Ramirez, Ruiqi Jian, Lihua Jiang, Michael P. Snyder · 2026 · Molecular & Cellular Proteomics
- Mitochondrial carrier SLC25A34 links clock, diet, and temperature control of adipocyte lipid cyclingIuliia E. Karavaeva, Astrid Linde Basse, Samuel A.J. Trammell, Mohammed Faiz Hussain, Lasse Kruse Markussen, Jesper Foged Havelund, Marie Sophie Isidor, Adam G. Chatoff, Andrea Andress Huacachino, Hannah J. Richter et al. · 2026 · Science
- Making Sense Out of the Proteome: the Utility of iTRAQ and TMTNarciso A. S. Couto, Caroline A. Evans, Jagroop Pandhal, Wen Wei Qiu, Trong Khoa Pham, Josselin Noirel, Phillip Craig Wright · 2014 · Royal Society of Chemistry eBooks
- Application of Mass Spectrometry in Translational EpigeneticsXiaoshi Wang, Simone Sidoli, Benjamin Aaron Garcia · 2015 · Elsevier eBooks
- Quantifying mitochondrial protein import by mePRODmt proteomicsSüleyman Bozkurt, Bhavesh S. Parmar, Christian Münch · 2024 · Methods in enzymology on CD-ROM/Methods in enzymology
- Ubiquitin Proteasome System Components, RAD23A and USP13, Modulate TDP-43 Solubility and Neuronal ToxicityCasey Dalton, Jelena Mojsilovic‐Petrovic, Nathaniel Safren, Carley Snoznik, Kamil K. Gebis, Yizhi Wang, Alexandra B. Sutter, Todd Lamitina, Jeffrey N. Savas, Robert Gordon Kalb · 2025 · Journal of Neuroscience
- A Protocol to Map the Spatial Proteome Using HyperLOPIT in Saccharomyces cerevisiaeDaniel J. H. Nightingale, Kathryn Susan Lilley, Stephen G. Oliver · 2019 · BIO-PROTOCOL
- Proteomics equipped with multiplexing toward ultra high throughputMin‐Sik Kim · 2014 · PROTEOMICS
- Translating Divergent Environmental Stresses into a Common Proteome Response through Hik33 in a Model CyanobacteriumHaitao Ge, Longfa Fang, Xiahe Huang, Jinlong Wang, Weiyang Chen, Ye Liu, Yuanya Zhang, Xiaorong Wang, Wu Xu, Qingfang He et al. · 2017 · Molecular & Cellular Proteomics
- Using Public Data for Comparative Proteome Analysis in Precision Medicine ProgramsChristopher S. Hughes, Gregg B. Morin · 2017 · PROTEOMICS - CLINICAL APPLICATIONS
- Automated Sample Multiplexing by using Combined Precursor Isotopic Labeling and Isobaric Tagging (cPILOT)Albert B. Arul, Renã A. S. Robinson · 2020 · Journal of Visualized Experiments
- Protein profiling in the habenula after chronic (–)‐menthol exposure in miceMatthew J. Mulcahy, Stephanie M. Huard, João A. Paulo, Jonathan H Wang, Sheri L. McKinney, Michael J. Marks, Brandon J. Henderson, Henry A. Lester · 2021 · Journal of Neurochemistry
- Isobaric Stable Isotope N‐Phosphorylation Labeling (iSIPL) for Ultrasensitive Proteome QuantificationXiaoyu Wang, Chun‐Jing Chen, Yaohui He, Lian‐Shuai Ding, Yifan Wu, Cheng‐Ting Huang, Jun Wu, Rong Ding, Yuhua Xue, Zhi‐Wei Lin et al. · 2023 · Angewandte Chemie
- Carrier-Guided Proteome Analysis in a High Protein Background: An Improved Approach to Host Cell Protein IdentificationDivyanshi Karmani, Niloofar Seifihesar, Mukhayyo Sultonova, Beau Blackmore, João A. Paulo, Matthew Harty, John Patrick Murphy · 2024 · Journal of Proteome Research
- Early mitochondrial stress and metabolic imbalance lead to photoreceptor cell death in retinal degenerationKe Jiang, Anupam Kumar Mondal, Yogita K. Adlakha, Jessica Gumerson, Angel M. Aponte, Linn M. Gieser, Jung-Woong Kim, Alexis Boleda, Matthew J. Brooks, Jacob K. Nellissery et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Phosphoproteomics: Methods and ChallengesTaewook Kang, Santosh Dilip Bhosale, Alistair V.G. Edwards, Martin R. Larsen · 2022 · Elsevier eBooks
- ProteomicsGonca Suna, Manuel Mayr · 2017 · Elsevier eBooks
- In-depth Analysis of the Sirtuin 5-regulated Mouse Brain Acylome using Library-free Data-Independent AcquisitionsJoanna Bons, Jacob Rose, Ran Zhang, Jordan B. Burton, Christopher Carrico, Eric M. Verdin, Birgit Schilling · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Neuron-specific protein expression at striatal excitatory synapsesYizhi Wang, Tamara Perez‐Rosello, Dalton James Surmeier, Jeffrey N. Savas · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Global substrate identification and high throughput in vitro dephosphorylation reactions uncover PP1 and PP2A-B55 specificity principlesJamin B. Hein, Hieu Thi Nguyen, Dimitriya Hristoforova Garvanska, Isha Nasa, Yinnian Feng, Blanca Lopez Mendez, Norman E. Davey, Arminja Nadine Kettenbach, Polly Morrell Fordyce, Jakob Nilsson · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Regulation of RNA methylation by therapy treatment, promotes tumor survivalSyed I. A. Bukhari, Samuel Spencer Truesdell, Chandreyee Datta, Pritha Choudhury, Keith Q. Wu, Jitendra Shrestha, Ruby Maharjan, Ethan Plotsker, Ramzi K. Elased, Sadia Laisa et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Mapping protein–exopolysaccharide binding interaction in Staphylococcus epidermidis biofilms by live cell proximity labelingLuan H. Vo, Steven Hong, Kaitlyn E. Stepler, Sureshee M. Liyanaarachchi, Jack Yang, Péter Nemes, Myles B. Poulin · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- sCIP-ing towards streamlined chemoproteomicsNikolas R. Burton, Keriann M. Backus · 2023 · ChemRxiv
- Boosting the Sensitivity of Quantitative Single-Cell Proteomics with Activated lon-Tandem Mass Tags (AI-TMT)Trenton M. Peters-Clarke, Yiran Liang, Keaton L. Mertz, Kenneth W. Lee, Michael S. Westphall, Joshua D. Hinkle, Graeme C. McAlister, John E. P. Syka, Ryan Kelly, Joshua J. Coon · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- Data Independent Acquisition Approaches for Single Cell ProteomicsGautam Ghosh, Ariana E. Shannon, Brian C. Searle · 2024
- Mitochondrial carrier SLC25A34 links clock, diet, and temperature control of interorganellar lipid cyclingIuliia E. Karavaeva, Astrid Linde Basse, Samuel A.J. Trammell, Mohammed Faiz Hussain, Lasse Kruse Markussen, Jesper Foged Havelund, Marie Sophie Isidor, Hannah J. Richter, Sabina Chubanava, Yann Deleye et al. · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
- Mass Spectrometry-Based Proteomic Analysis in Neurodegenerative Disorders’ ResearchEwa Bulska, Marta Bicka, Andrzej Gawor, Adam Karpiński, Anna Konopka · 2022 · Springer eBooks
- Mass Spectrometry for Biomarker DevelopmentChaochao Wu, Tao Liu, Erin Shammel Baker, Karin Rodland, Richard D. Smith · 2014 · Springer eBooks
- Chemical proteomic approaches to investigate N-myristoylationJames Zhang, Wouter W. Kallemeijn, Sarah Hassan, Edward W. Tate · 2025 · Methods in enzymology on CD-ROM/Methods in enzymology
- Expanding Targeted Instrumentation for Discovery Applications: Complement Reporter Ion Quantification with a Quadrupole–Ion Trap InstrumentEdward R. Cruz, Alex N. T. Johnson, V. B. Pujari, Qi Zhang, Thao Nguyen, Michael Stadlmeier, Jessica Wang, Cristina C. Jacob, Graeme C. McAlister, Philip M. Remes et al. · 2025 · Journal of Proteome Research
- Evaluation of Protein Ion Relative Ratio Quantification in Top-down Electrospray Ionization-Mass Spectrometry Using Site-Specific Acetylated Recombinant Histone H3 ProteoformsKin-Wing Lui, Sai Ming Ngai, Ting‐Fung Chan · 2025 · Journal of the American Society for Mass Spectrometry
- Targeting the unexplored 'dark proteome': Novel approaches in drug discoveryDilpreet Singh · 2025 · Current Proteomics
- Unambiguous identification and quantification of galactose-α-1,3-galactose as a critical quality attribute with mass spectrometry and exoglycosidasesYutian Gan, Elizabeth J. Johnson, Vy Tran, Kyle Spitler, Yiran Liang, John B. Briggs, Tomasz K. Baginski, Christian Schöneich, Feng Yang · 2025 · mAbs
- LIN28A-Dependent Kinome and Phosphoproteome Reprogramming Promotes Imatinib ResistanceOwen F.J. Hovey, Mallory I. Frederick, Quan M. Quach, Jenica H. Kakadia, Alyssa Wu, Kyle Yang, Tingting Wu, Xiang Ruan, Tomonori Kaneko, Courtney Voss et al. · 2026 · Molecular & Cellular Proteomics
- Modeling Synaptic Maturation From Growth Cone to Synapse in Human OrganoidsMarie Sejberg Øhlenschlæger, Lucrezia Criscuolo, Pia Jensen, Daniel J Lloyd-Davies Sanchez, Magdalena A. Sutcliffe, Santosh Bhosale, Helle Bogetofte, Muhammad Tahir, Lene Andrup Jakobsen, Maria Pihl et al. · 2026 · Journal of Neurochemistry
- Functional atlas of vertebrate viral RNA elements that stabilize RNA and enhance translationJenny J. Seo, Chemin Lee, 임동빈, Minseok Jeong, Soo Jin Jung, V. Narry Kim · 2026 · Cell
- Pre‐processing of Orbitrap higher energy collisional dissociation tandem mass spectra to reduce erroneous iTRAQ ratiosJoonas Rissanen, Robert Moulder, Riitta Lahesmaa, Olli Nevalainen · 2012 · Rapid Communications in Mass Spectrometry
- MS2-Based QuantitationMarc Vaudel · 2016 · Royal Society of Chemistry eBooks
- Application of Isobaric Tags for Relative and Absolute Quantitation (iTRAQ) to Monitor Olfactory Proteomes During Alzheimer’s Disease ProgressionAndrea González-Morales, Mercedes Lachén‐Montes, María Ibáñez-Vea, Enrique Santamaría, Joaquín Fernández‐Irigoyen · 2017 · Neuromethods
- Gel-Free ProteomicsDominique Baiwir, Paolo Nanni, Susanne Müller, Nicolas Smargiasso, Denis Morsa, Edwin De Pauw, Gabriel Mazzucchelli · 2018 · Springer eBooks
- Peptide-to-Protein Summarization: An Important Step for Accurate Quantification in Label-Based ProteomicsMartina Fischer, Thilo Muth, Bernhard Y. Renard · 2019 · Methods in molecular biology
- Mass Spectrometry-Based Proteomic Analysis in Neurodegenerative Disorders’ ResearchEwa Bulska, Marta Bicka, Andrzej Gawor, Adam Karpiński, Anna Konopka · 2022 · Springer eBooks
- Automated Sample Multiplexing by using Combined Precursor Isotopic Labeling and Isobaric Tagging (cPILOT)Albert B. Arul, Renã A. S. Robinson · 2020 · Journal of Visualized Experiments
- TMT29 plex: Higher order multiplexing with inherent interference correctionTian Zhang · 2022 · PROTEOMICS
- Evaluation of Quantification and Normalization Strategies for Phosphoprotein Phosphatase Affinity Proteomics: Application to Breast Cancer SignalingBrooke L. Brauer, Kwame Wiredu, Scott A. Gerber, Arminja Nadine Kettenbach · 2022 · Journal of Proteome Research
- Assessing the Phagosome Proteome by Quantitative Mass SpectrometryMaría Emilia Dueñas, José Luis Marín‐Rubio, Julien Peltier, Anetta Härtlová, Matthias Trost · 2023 · Methods in molecular biology
- Dual Fragmentation Isobaric Tags for MetabolomicsMichael R. Armbruster, Scott F. Grady, Rhea N. Caldwell, Christopher Kent Arnatt, James L. Edwards · 2023 · Journal of the American Society for Mass Spectrometry
- Overcoming the detrimental O-acylation in TMTpro labeling improves the proteome depth and quantification precisionYan Cai, Chenchen Chang, Rijing Liao · 2024 · Analytica Chimica Acta
- Synthetic Knockout Protein Standard for Evaluating Interference in Tandem Mass Tag-Based ProteomicsJosé Navarrete-Perea, Jiaming Li, Dylan Charles Mitchell, An Chi · 2024 · Analytical Chemistry
- Mass Spectrometry Acquisition and Fractionation Recommendations for TMT11 and TMT16 Labeled SamplesRyan M. Riley, Gian Luca Negri, Siwei Cheng, Sandra E. Spencer Miko, Ryan D. Morin, Gregg B. Morin · 2024 · Journal of Proteome Research
- Characterization of the Clostridioides difficile 630Δerm putative Pro-Pro endopeptidase CD1597Bart Claushuis, Arnoud H. de Ru, Peter A. van Veelen, Paul J. Hensbergen, Jeroen Corver · 2024 · Access Microbiology
- Applications of Mass Spectrometric Assays for Analysis of Serum Protein N-glycosylation Associated with Pancreatic Cancer.Zhenxin Lin · 2013 · Deep Blue (University of Michigan)
- Analysis of Brain Phosphoproteome Using Titanium Dioxide Enrichment and High-Resolution LC-MS/MSJeffrey M. Sifford, Haiyan Tan, Hong Wang, Junmin Peng · 2017 · Neuromethods
- Kinase Assay-Linked PhosphoproteomicsJustine V. Arrington, Chuan‐Chih Hsu, W. Andy Tao · 2016 · Methods in enzymology on CD-ROM/Methods in enzymology
- Evaluation of the Potential Risk of Advanced Peak Determination in Distorting Isobaric Labeling‐Based Single‐Shot Proteome QuantitationJinlong Wang, Yuanya Zhang, Xiahe Huang, Dandan Lu, Yingchun Wang · 2020 · PROTEOMICS
- Mass spectrometry-based proteomics and peptidomics for systems biology and biomarker discoveryRobert Cunningham, Di Ma, Lingjun Li · 2012 · Frontiers in Biology
- Mass spectrometry for human kinome analysisWeili Miao, Yinsheng Wang · 2021 · Elsevier eBooks
- Mass Spectrometry for Biomarker DevelopmentChaochao Wu, Tao Liu, Erin Shammel Baker, Karin Rodland, Richard D. Smith · 2015 · Biomarkers in disease
- Identification and Analysis of Protein Phosphorylation by Mass SpectrometryDean E. McNulty, Timothy W. Sikorski, Roland S. Annan · 2016 · Wiley eBooks
- Dissecting Protein Complexes in Branching Microtubule Nucleation Using Meiotic Xenopus Egg ExtractsJae-Geun Song, Sabine Petry · 2018 · Cold Spring Harbor Protocols