Counting absolute numbers of molecules using unique molecular identifiers

Kivioja, Teemu, Vähärautio, Anna, Karlsson, Kasper, Bonke, Martin, Enge, Martin, Linnarsson, Sten, Taipale, Jussi·2012·Nature Methods

Cited by (1,001)

Items 701–800 of 1,001

  1. Characterization of microRNA Profiles in Pasteurella multocida-Infected Rabbits and Identification of miR-29-5p as a Regulator of Antibacterial Immune Response
    Jiaqing Hu, Wenqiang Li, Xibo Qiao, Wenjie Li, Kerui Xie, Yanyan Wang, Bing Huang, Qiaoya Zhao, Lei Liu, Xinzhong Fan · 2021 · Frontiers in Veterinary Science
  2. Identification of tumor mutations in plasma based on mutation variant frequency change ( MVFC )
    Geng Chen, Fang Peng, Xiuqing Dong, Zhixiong Cai, Zhenli Li, Lei He, Jinpan Hu, Xiaoxu Deng, Yutong Guo, Liman Qiu et al. · 2023 · Molecular Oncology
  3. Transcriptome Sequencing (RNA-Seq)
    Sugganth Daniel, Alberto Paniz‐Mondolfi, Federico A. Monzon · 2014 · Springer eBooks
  4. An advanced enrichment method for rare somatic retroelement insertions sequencing
    Alexander Yu. Komkov, Anastasia A. Minervina, Gaiaz A. Nugmanov, Mariia Saliutina, Konstantin V. Khodosevich, Yuri B. Lebedev, Ilgar Z. Mamedov · 2018 · Mobile DNA
  5. QsRNA-seq: A protocol for Generating Libraries for High-throughput Sequencing of Small RNAs
    Alla Fishman, Ayelet T. Lamm · 2019 · BIO-PROTOCOL
  6. Single-Cell Transcriptomics
    Marta Prieto‐Vila, Yusuke Yamamoto, Ryou‐u Takahashi, Takahiro Ochiya · 2021 · Springer eBooks
  7. Single-Cell Genomics and Epigenomics
    Fátima Valdés‐Mora, Heather J Lee · 2016 · Series in bioengineering
  8. Single molecule counting and assessment of random molecular tagging errors with transposable giga-scale error-correcting barcodes
    Billy T. Lau, Hanlee P. Ji · 2017 · BMC Genomics
  9. Multiplex technologies for the assessment of minimal residual disease and low‐level mutation detection in leukaemia: mass spectrometry versus next‐generation sequencing
    Naranie Shanmuganathan, Susan Branford · 2021 · British Journal of Haematology
  10. Boosting the power of transcriptomics by developing an efficient gene expression profiling approach
    Jing Wang, Jun Xu, Xiaohan Yang, Song Xu, Ming Zhang, Fei Lü · 2021 · Plant Biotechnology Journal
  11. Clinically-weighted transcriptomic signatures for protein kinase inhibitor associated cardiotoxicity
    J. G. Coen van Hasselt, J Hansen, Yuguang Xiong, J Shim, A Pickard, Gomathi Jayaraman, Bin Hu, Milind C. Mahajan, J Gallo, Eric A. Sobie et al. · 2016 · bioRxiv (Cold Spring Harbor Laboratory)
  12. TRUmiCount: Correctly counting absolute numbers of molecules using unique molecular identifiers
    Florian Pflug, Arndt von Haeseler · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
  13. HLA RNAseq reveals high allele-specific variability in mRNA expression
    Tiira Johansson, Dawit A. Yohannes, Satu Koskela, Jukka Partanen, Päivi Saavalainen · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  14. Unexpected variability of allelic imbalance estimates from RNA sequencing
    A. Mendelevich, S. Vinogradova, Saumya Gupta, A. A. Mironov, S. Sunyaev, Alexander A. Gimelbrant · 2020 · bioRxiv
  15. Physiologic RNA Targets and Refined Sequence Specificity of Coronavirus EndoU
    Rachel Ancar, Yize Li, Eveline Kindler, Daphne A. Cooper, Monica Ransom, Volker Thiel, Susan Reich Weiss, Jay R. Hesselberth, David J. Barton · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  16. Reply to: UMI or not UMI, that is the question for scRNA-seq zero-inflation
    Valentine Svensson · 2021 · Nature Biotechnology
  17. Unbiased and UMI-informed sequencing of cell-free miRNAs at single-nucleotide resolution
    Monique A.J. van Eijndhoven, Ernesto Aparicio‐Puerta, Cristina Gómez‐Martín, José M. Medina, Esther E.E. Drees, E.J. Bradley, Leontien Bosch, Chantal Scheepbouwer, Michael Hackenberg, Dirk Michiel Pegtel · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  18. Data-driven filtering for denoising of TCRpMHC single-cell data: a benchmark
    Helle Rus Povlsen, Alessandro Montemurro, Leon Eyrich Jessen, Morten Nielsen · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  19. Non-invasive prenatal testing of beta-hemoglobinopathies using next generation sequencing, in-silico sequence size selection, and haplotyping
    Henry A. Erlich, Lily Ko, Jiyae Lee, Katrina Eaton, Cassandra Calloway, Ashutosh Lal, Reena Das, Manu Jamwal, Christian López-Peña, Steven J. Mack · 2024 · Croatian Medical Journal
  20. Primed Extracellular Vesicles as a Nanotherapeutic Strategy to Enhance Granulosa Cell Function in a Model of Premature Ovarian Insufficiency and Hormonal Decline
    Ju-Sheng Shieh, Yu‐Tang Chin, Jiong Jiong Guo, Hsien‐Chung Chiu, Hui-Rong Cheng, Hung-Han Hsu, Chuang-Yen Huang, Yu‐Hsuan Chen, Ya-Yu Hsieh, Fung-Wei Chang · 2025 · International Journal of Nanomedicine
  21. Technologies and opportunities in cell-free RNA analysis for clinical diagnostics
    Linyi Deng, Da Han · 2025 · TrAC Trends in Analytical Chemistry
  22. 单细胞测序在植物研究中的应用
    Yanyan An, Minghui Zhang, Hexin Tan · 2024 · Chinese Science Bulletin (Chinese Version)
  23. Investigation into the genotyping performance of a unique molecular identifier based microhaplotypes MPS panel in complex DNA mixture
    Qiang Zhu, Haoyu Wang, Yuhan Hu, Yifan Wei, Yuting Wang, Tingyun Hou, Tiantian Shan, Xiaokang Zhang, Chun Yang, Yuntao Cai et al. · 2025 · Forensic Science International Genetics
  24. Theoretical Basis for the Highly Efficient Aptamer Selection Using Unique Molecular Identifiers
    Zhenhao Long, Jingjing Yu, Tao Bing · 2025 · Analytical Chemistry
  25. A novel RNA-binding activity of ECD contributes to U5 snRNP stability and pre-mRNA splicing
    Mohsin Raza, Asher Rajkumar Rajan, Achyuth Kalluchi, Bhopal Mohapatra, Irfana Saleem, Benjamin B. Kennedy, Kishor K. Bhakat, Hamid Band, M. Jordan Rowley, Vimla Band · 2026 · Nucleic Acids Research
  26. Application of nonsense-mediated primer exclusion (NOPE) for preparation of unique molecular barcoded libraries
    Dmitry A. Shagin, Maria A. Turchaninova, Irina A. Shagina, Mikhail Shugay, Andrew R. Zaretsky, Olga I. Zueva, Dmitriy A. Bolotin, Sergey Lukyanov, Dmitriy M. Chudakov · 2017 · BMC Genomics
  27. Covalent “Click Chemistry”-Based Attachment of DNA onto Solid Phase Enables Iterative Molecular Analysis
    Billy T. Lau, Hanlee P. Ji · 2019 · Analytical Chemistry
  28. Circulating Tumor DNA as a Biomarker for Outcomes Prediction in Colorectal Cancer Patients
    Angelica Petrillo, Massimiliano Salati, Dario Trapani, Michele Ghidini · 2020 · Current Drug Targets
  29. Efficient Linear dsDNA Tagging Using Deoxyuridine Excision**
    Eric J. Strobel · 2021 · ChemBioChem
  30. Accounting for technical noise in Bayesian graphical models of single-cell RNA-sequencing data
    Ji‐Hwan Oh, Changgee Chang, Qi Long · 2021 · Biostatistics
  31. Application of RtcB ligase to monitor self-cleaving ribozyme activity by RNA-seq
    V Janett Olzog, Lena I. Freist, Robin Goldmann, Jörg Fallmann, Christina E. Weinberg · 2022 · Biological Chemistry
  32. Molecular characterization of hypoxanthine guanine phosphoribosyltransferase mutant T cells in human blood: The concept of surrogate selection for immunologically relevant cells
    Noah A. Kaitz, Cindy Zuleger, Peng Yu, Michael A. Newton, Richard J. Albertini, Mark R. Albertini · 2022 · Mutation Research/Reviews in Mutation Research
  33. Single-Cell Transcriptomic Analysis in the Regenerating Cnidarian Nematostella vectensis
    Flora Plessier, Sandrine Schmutz, Sophie Novault, Heather Q. Marlow · 2022 · Methods in molecular biology
  34. Preanalytical Variables and Sample Quality Control for Clinical Variant Analysis
    Ilaria Alborelli, Philip M. Jermann · 2022 · Methods in molecular biology
  35. Analysis of the Sequence Preference of Saporin by Deep Sequencing
    Samuel Hauf, Rachapun Rotrattanadumrong, Yohei Yokobayashi · 2022 · ACS Chemical Biology
  36. Microfluidic-assisted single-cell RNA sequencing facilitates the development of neutralizing monoclonal antibodies against SARS-CoV-2
    Ziwei Wang, Amelia Siqi Huang, Lingfang Tang, Jianbin Wang, Guanbo Wang · 2024 · Lab on a Chip
  37. Involvement of Histone Acetyltransferase 1 (HAT1) in the Spermatogenesis of Non-Condensed Nuclear Sperm in Chinese Mitten Crab, Eriocheir sinensis
    Huiting Liu, Yulian Tang, Lishuang Sun, Shu Li, Lvjing Luo, Zhengyu Chen, Genliang Li · 2024 · Biochemical Genetics
  38. Prenatal maternal plasma DNA screening for cystic fibrosis: A computer modelling study of screening performance
    Robert W. Old, Jonathan Paul Bestwick, Nicholas Wald · 2017 · F1000Research
  39. Emerging Strategies for Therapeutic Antibody Discovery from Human B Cells
    Saravanan Rajan, William F. Dall’Acqua · 2020 · Advances in experimental medicine and biology
  40. Small RNA Sequencing to Discover Circulating MicroRNA Biomarkers of Testicular Toxicity in Dogs
    Jennifer C. Shing, Kai Schaefer, Shaun E. Grosskurth, Andy H. Vo, Tatiana Sharapova, Karen Bodié, Takahito Kambara, Wayne R. Buck · 2020 · International Journal of Toxicology
  41. Optimized variant calling for estimating kinship.
    A. Woerner, Sammed N. Mandape, Kapema Bupe Kapema, Tiffany Duque, Amy Smuts, J. King, Benjamin Crysup, Xue-Wen Wang, Meng Huang, Jian-Ye Ge et al. · 2022 · Forensic Science International: Genetics
  42. Evaluation of ribonucleic acid amplification protocols for human oocyte transcriptome analysis
    Eleni Mantikou, Oskar Bruning, Sebastiaan Mastenbroek, Sjoerd Repping, Timo M. Breit, Mark de Jong · 2015 · Fertility and Sterility
  43. Natural Diversity in Pentose Fermentation Is Explained by Variations in Histone Deacetylases
    Zvi Tamari, Naama Barkai · 2016 · Cell Reports
  44. Emerging Modeling Concepts and Solutions in Stem Cell Research
    Dmitri Papatsenko, Ihor R. Lemischka · 2016 · Current topics in developmental biology/Current Topics in Developmental Biology
  45. Darwinian properties and their trade-offs in autocatalytic RNA reaction networks
    Sandeep Ameta, Simon Arsène, Sophie Foulon, Baptiste Saudemont, Bryce E. Clifton, Andrew D. Griffiths, Philippe Nghe · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  46. The Application of Single-Cell Sequencing in Dynamic Transcriptomes
    Kenian Chen, Xiaomin Dong, Jiaqian Wu · 2015 · Translational bioinformatics
  47. Simultaneous detection of DNA variation and methylation at HLA class II locus and immune gene promoters using targeted SureSelect Methyl-Sequencing
    Maria Kalomoiri, Chandana Rao Prakash, Sonja Lagström, Kai Hauschulz, Ewoud Ewing, Klementy Shchetynsky, Lara Kular, Maria Needhamsen, Maja Jagodic · 2023 · Frontiers in Immunology
  48. Adaptive immune receptor repertoires, an overview of this exciting field
    Susana Magadán · 2020 · Immunology Letters
  49. MARS-seq2.0: an experimental and analytical pipeline for indexed sorting combined with single-cell RNA sequencing v1
    Hadas Keren Shaul, Hadas Keren‐Shaul, Ephraim Kenigsberg, Diego Adhemar Jaitin, Eyal David, Franziska Paul, Amos Tanay, Ido Amit · 2019
  50. ATRAP - Accurate T cell Receptor Antigen Pairing through data-driven filtering of sequencing information from single-cells
    Helle Rus Povlsen, Amalie Kai Bentzen, Mohammad Kadivar, Leon Eyrich Jessen, Sine Reker Hadrup, Morten Nielsen · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  51. Best practices in designing, sequencing and identifying random DNA barcodes
    Milo S. Johnson, Sandeep Venkataram, Sergey Kryazhimskiy · 2022
  52. TB-annotator: a scalable web application that allows in-depth analysis of very large sets of publicly available Mycobacterium tuberculosis complex genomes
    Gaëtan Senelle, Christophe Guyeux, Guislaine Refrégier, Christophe Sola · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  53. Peptide sequencing via reverse translation of peptides into DNA
    Liwei Zheng, Yujia Sun, Michael S. Eisenstein, Hyongsok Tom Soh · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  54. The YTHDF proteins shape the brain gene signatures of Alzheimer’s disease
    Shinya Tasaki, Denis R. Avey, Nicola A. Kearns, Chunjiang Yu, Sashini L De Tissera, Himanshu Vyas, Lin Cheng, Jishu Xu, Artemis Iatrou, Daniel J. Flood et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  55. Scaling perturbations: beyond genome-scale CRISPR screens
    Anran Tang, Rico Chandra Ardy, Rafaela Mendes, Thomas M. Norman · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  56. Molecule Differentiation Encoding Microscopy to Dissect Dense Biomolecules in Cellular Nanoenvironments below Spatial Resolution
    Siyue Fan, Xuegang Li, Huan Liu, Mengying Ye, Yanliang He, Wenhao Fu, Feng Chen, Yongxi Zhao · 2025 · Angewandte Chemie
  57. Predicting sequence-specific amplification efficiency in multi-template PCR with deep learning
    Andreas L. Gimpel, Bowen Fan, Dexiong Chen, Laetitia O. D. Wölfle, Max Horn, Laetitia Meng-Papaxanthos, Philipp L. Antkowiak, Wendelin Jan Stark, Beat Christen, Karsten Michael Borgwardt et al. · 2025 · Nature Communications
  58. Biophysical-to-DNA Catalytic Cumulative Birecorder for Measuring Continuous Membrane Fluidity
    Mengying Ye, Xuegang Li, Lu Huang, Xinru Mei, Huahang Yu, Ke Cao, Feng Chen, Yongxi Zhao · 2025 · Journal of the American Chemical Society
  59. Anchored random reverse primer sequencing for quantitative detection of novel gene fusions
    Xuehao Xiu, Yi Wu, Jiangxue Li, Dongfa Lin, Xiao Sun, Xinglei Su, Zhi Weng, Xiaolei Zuo, Xiurong Yang, Chunhai Fan et al. · 2026 · Nature Biomedical Engineering
  60. Immune Landscape and Tumour Heterogeneity in Ovarian Cancer: Insights From Single‐Cell RNA Sequencing
    Sihan Chen, Ghada Moh. Samir Elhessewi, Helen Cai, Wedad M. Alawad, Manoj Kumar Mishra, Usamah Sayed · 2026 · Journal of Cellular and Molecular Medicine
  61. Single-Cell Omics for Drug Discovery and Development
    Muhammad Uzair Hashmi, Shah Rukh Abbas · 2019 · Elsevier eBooks
  62. What Clonal Hematopoiesis Can Teach Us About MDS
    Irenaeus C.C. Chan, Brian J. Wiley, Kelly L. Bolton · 2022 · Frontiers in Oncology
  63. Scalable Combinatorial Assembly of Synthetic DNA for Tracking Applications
    Julius D. Stuart, Natalie R. Wickenkamp, Kaleb A. Davis, Camden Meyer, Rebekah C. Kading, Christopher Davis Snow · 2023 · International Journal of Molecular Sciences
  64. Comparison of Sequencing-by-Synthesis and Avidity Base Chemistry Next-Generation Sequencing Platforms in Identifying Somatic Variants of Hematological Malignancies
    Min Hui Lim, Juwuk Kim, Zheng Jin Tu, Yu‐Wei Cheng · 2025 · The Journal of Applied Laboratory Medicine
  65. ABC‐seq Expands Small RNAs Profiling with Successive Nucleic Acid Structure‐Differentiated Enzymatic Recognition
    Huahang Yu, Mengying Ye, Yingying Guo, Yating Sun, Ke Jiang Cao, Dexin Zhang, Feng Chen, Yongxi Zhao · 2025 · Angewandte Chemie International Edition
  66. Clusters of deep intronic RbFox motifs embedded in large assembly of splicing regulators sequences regulate alternative splicing
    Francesco Tomassoni‐Ardori, Mary Ellen Palko, Melissa Galloux, Lino Tessarollo · 2025 · PLoS Genetics
  67. Eukaryotic Single-Cell mRNA Sequencing
    Kenneth J. Livak · 2016 · Springer eBooks
  68. The Impact of Collisions on the Ability to Detect Rare Mutant Alleles Using Barcode-Type Next-Generation Sequencing Techniques
    Jenna VanLiere Canzoniero, Karen Cravero, Ben Ho Park · 2017 · Cancer Informatics
  69. Characterization of the T-cell Repertoire after Autologous HSCT in Patients with Ankylosing Spondylitis
    Ekaterina A. Komech, Ivan V. Zvyagin, Mikhail V. Pogorelyy, Ilgar Z. Mamedov, Федоренко Денис Анатольевич, Yuri B. Lebedev · 2018 · Acta Naturae
  70. Single-Cell Transcriptomics: Technology and Applications
    Ota Fuchs · 2019 · Elsevier eBooks
  71. R-Score: A New Parameter to Assess the Quality of Variants’ Calls Assessed by NGS Using Liquid Biopsies
    Roberto Serna‐Blasco, Estela Sánchez‐Herrero, María Berrocal Renedo, Silvia Calabuig Fariñas, Miguel Ángel Molina‐Vila, Mariano Provencio, Atocha Romero · 2021 · Biology
  72. High-throughput mapping of RNA solvent accessibility at the single-nucleotide resolution by RtcB ligation between a fixed 5′-OH-end linker and unique 3′-P-end fragments from hydroxyl radical cleavage
    Md. Solayman, Thomas Litfin, Yaoqi Zhou, Jian Zhan · 2022 · RNA Biology
  73. OPERA-gSAM: Big Data Processing Framework for UMI Sequencing at High Scalability and Efficiency
    Pablo V. Caderno, Feras M. Awaysheh, Yolanda Colino‐Sanguino, Laura Rodríguez de la Fuente, Fátima Valdés‐Mora, Jose Carlos Cabaleiro, Tomás F. Pena, David Gallego‐Ortega · 2023 · IEEE International Symposium on Cluster, Cloud and Internet Computing Workshops (CCGridW)
  74. Биоинформатический алгоритм обработки данных высокопроизводительного секвенирования для прецизионной идентификации соматических инсерций ретроэлементов
    Gaiaz A. Nugmanov, Alexander Yu. Komkov, Maria V. Saliutina, Anastasia A. Minervina, Yuri B. Lebedev, Ilgar Z. Mamedov · 2019 · Molecular Biology
  75. 3' End Sequencing Library Preparation with A-seq2
    Georges Martin, Ralf Schmidt, Andreas J Gruber, Souvik Ghosh, Walter Keller, Mihaela Zavolan · 2017 · Journal of Visualized Experiments
  76. BLISS: quantitative and versatile genome-wide profiling of DNA breaks in situ
    Winston X. Yan, Reza Mirzazadeh, Silvano Garnerone, David A. Scott, Martin Schneider, Tomasz Kallas, Joaquín Custodio, Erik Wernersson, Linyi Alex Gao, Yinqing Li et al. · 2016 · bioRxiv (Cold Spring Harbor Laboratory)
  77. Software solutions for reproducible RNA-seq workflows
    Trevor Meiss, Ling‐Hong Hung, Yuguang Xiong, Eric A. Sobie, Ka Yee Yeung · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
  78. Cryptography for genetic material
    Sterling M. Sawaya · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
  79. Spatial transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes
    Annabel Ebbing, Ábel Vértesy, Marco C. Betist, Bastiaan Spanjaard, Jan Philipp Junker, Eugène Berezikov, Alexander van Oudenaarden, Hendrik C. Korswagen · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  80. Extent, Heritability, and Functional Relevance of Single Cell Expression Variability in Highly Homogeneous Populations of Human Cells
    Daniel Osorio, Xue Qing Yu, Yan Zhong, Guanxun Li, Peng Yu, Erchin Serpedin, Jianhua Huang, James J. Cai · 2019 · SSRN Electronic Journal
  81. Benchmarking UMI-based single cell RNA-sequencing preprocessing workflows
    Yue You, Luyi Tian, Shian Su, Xueyi Dong, Jafar S. Jabbari, Peter F. Hickey, Matthew E. Ritchie · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  82. Clustering single cell CITE-seq data with a canonical correlation based deep learning method
    Musu Yuan, Liang Chen, Minghua Deng · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  83. Accurate measurement of microsatellite length by disrupting its tandem repeat structure
    Dan Levy, Zihua Wang, Andrea B. Moffitt, Michael H. Wigler · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  84. Correcting PCR amplification errors in unique molecular identifiers to generate absolute numbers of sequencing molecules
    Jianfeng Sun, Martin Philpott, Danson Shek Chun Loi, Shuang Li, Pablo Monteagudo-Mesas, Gabriela Hoffman, Jonathan Robson, Neelam Mehta, Vicki Gamble, Tom Brown et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
  85. Abundance estimation with DNA metabarcoding – recent advancements for terrestrial arthropods
    Wiebke Sickel, Vera Marie Alida Zizka, Alice M. Scherges, Sarah J. Bourlat, Petra Dieker · 2023
  86. Deep learning uncovers sequence-specific amplification bias in multi-template PCR
    Andreas L. Gimpel, Bowen Fan, Dexiong Chen, Laetitia O. D. Wölfle, Max Horn, Laetitia Meng-Papaxanthos, Philipp L. Antkowiak, Wendelin Jan Stark, Beat Christen, Karsten Michael Borgwardt et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  87. MrHAMER2: high-accuracy long-read RNA sequencing to decode isoform-specific variation in viral transcripts during latency
    Christian M. Gallardo, Jessica L. Albert, Andrew A. Qazi, Roni Lobato Ventura, Savitha Deshmukh, Nadejda Beliakova‐Bethell, Bruce Edward Torbett · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
  88. The methodological challenge in high‐throughput profiling and quantifying microRNAs
    Mengya Chai, Xueyang Xiong, Huimin Wang, Lida Xu · 2021 · Quantitative Biology
  89. Human transcriptome profiling: applications in health and disease
    Arun Bahadur Gurung · 2022 · Elsevier eBooks
  90. Estimating somatic mutation rates by bottlenecked duplex sequencing in non-model organisms: Daphnia magna as a case study
    Eli Sobel, Jeremy E. Coate, Sarah Schaack · 2022 · Journal of Biological Methods
  91. An overview of single-cell high-throughput technology in plants
    Lucas Auroux, Lim Chee Liew, Mathew G. Lewsey · 2025 · Elsevier eBooks
  92. Combinatorial protein engineering identifies potent CRISPR activators with reduced toxicity
    Marla J. Giddins, Alexander F. Kratz, Mark B. De Los Santos, Antoine Forget, Richa Tiwari, Gwendolyn Μ. Jang, Tomasz Blazejewski, Chuyan Qin, Yiming Huang, Yeh‐Hsing Lao et al. · 2025 · Nature Communications
  93. Liquid biopsy current techniques
    Burcu Uner, Özge Dağdeviren Çevik · 2025 · Elsevier eBooks
  94. The Need for Standardization of Extracellular Vesicle Characterization Methods
    Bryant C. Nelson, Molly Wintenberg, Samuel W. Schaffter, Wyatt N. Vreeland · 2025 · Springer eBooks
  95. Bayesian Hyperspherical Graph Mixture-of-Experts Deciphers Cell–Cell Interaction in Spatial Transcriptomics
    Wenchuan Zhang, Yujian Lee, Ricky Yuen-Tan Hou, Weifeng Su, Hong Yan, Wentao Fan · 2026 · IEEE Transactions on Computational Biology and Bioinformatics
  96. Simultaneous Prenatal cfDNA Screening of Aneuploidy, Recessive Single-Gene Conditions, and Fetomaternal Blood Compatibility
    Juexiao Sherry Wang, Christopher Jon Battey, Kyle Trettin, Ravi Patel, Anu Priyadharshini Srinivasan, Janani Saikumar, Divya Kushnoor, Ben F. Habermeyer, Sangita Ganesh, Nafei Xu et al. · 2026 · Clinical Chemistry
  97. Somatic mutations from pathogenesis to forensic medicine: opportunities, challenges, and future directions
    Hamed Charkhian, Hassan Eskandari, Vida Pourteimoor, Şeref Buğra Tunçer · 2026 · Legal Medicine
  98. A metrological foundation for absolute transcriptomics using International System of Units-anchored calibrators
    Yu Zhang, Bingwen Yang, Ying Yu, Xia Wang, Chunyan Niu, Yongzhuo Zhang, Yang Liu, Jingshu Li, Caihang Zhang, Jiayi Yang et al. · 2026 · Nature Communications
  99. sc-rDSeq: a robust and cost-effective full-length total RNA sequencing method for single cells reveals multilayered heterogeneity in drug-resistant lung cancer cells
    Xue Sun, Shir-Liya Dadon, Dena Ennis, Wenpeng Fan, Muhammad Awawdy, Eli Reuveni, Adi Alajem, Oren Ram · 2026 · Nucleic Acids Research
  100. Key Concepts in Transcriptomics Data Analysis in the Era of Next-Gen Sequencing
    Saumya Kumar · 2026 · Advances in experimental medicine and biology