Scenic: single-cell regulatory network inference and clustering.

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Items 501–600 of 1,038

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10. SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks
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14. Reticular Fibroblasts Expressing the Transcription Factor WT1 Define a Stromal Niche that Maintains and Replenishes Splenic Red Pulp Macrophages
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19. Single-cell RNA sequencing identifies an Il1rn+/Trem1+ macrophage subpopulation as a cellular target for mitigating the progression of thoracic aortic aneurysm and dissection
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20. Multimodal single-cell profiling of intrahepatic cholangiocarcinoma defines hyperactivated Tregs as a potential therapeutic target
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22. Single-Cell Chromatin Analysis of Mammary Gland Development Reveals Cell-State Transcriptional Regulators and Lineage Relationships
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24. Integration Analysis of Single‐Cell Multi‐Omics Reveals Prostate Cancer Heterogeneity
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25. Dysfunction of Hair Follicle Mesenchymal Progenitors Contributes to Age-Associated Hair Loss
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26. Single cell eQTL analysis identifies cell type-specific genetic control of gene expression in fibroblasts and reprogrammed induced pluripotent stem cells
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27. Role of Calcium Signaling Pathway‐Related Gene Regulatory Networks in Ischemic Stroke Based on Multiple WGCNA and Single‐Cell Analysis
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28. Medin co-aggregates with vascular amyloid-β in Alzheimer’s disease
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29. NADase CD38 is a key determinant of ovarian aging
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30. Two distinct epithelial-to-mesenchymal transition programs control invasion and inflammation in segregated tumor cell populations
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31. MAP3K2-regulated intestinal stromal cells define a distinct stem cell niche
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32. Single-cell transcriptome profiling reveals vascular endothelial cell heterogeneity in human skin
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33. A pan-tissue DNA methylation atlas enables in silico decomposition of human tissue methylomes at cell-type resolution
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34. Integrated single-cell transcriptomic analyses reveal that GPNMB-high macrophages promote PN-MES transition and impede T cell activation in GBM
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35. A single-cell transcriptomic inventory of murine smooth muscle cells
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36. Single-cell transcriptomic analysis identifies murine heart molecular features at embryonic and neonatal stages
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37. Single-cell sequencing of ascites fluid illustrates heterogeneity and therapy-induced evolution during gastric cancer peritoneal metastasis
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38. Single-cell RNA sequencing reveals intratumoral heterogeneity in primary uveal melanomas and identifies HES6 as a driver of the metastatic disease
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39. Actuation enhances patterning in human neural tube organoids
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40. Single‐cell profiles reveal distinctive immune response in atopic dermatitis in contrast to psoriasis
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41. Presence of onco-fetal neighborhoods in hepatocellular carcinoma is associated with relapse and response to immunotherapy
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42. Single-cell and spatial analyses revealed the co-location of cancer stem cells and SPP1+ macrophage in hypoxic region that determines the poor prognosis in hepatocellular carcinoma
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44. Cellular plasticity balances the metabolic and proliferation dynamics of a regenerating liver
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45. GRAND: a database of gene regulatory network models across human conditions
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48. Single-cell and bulk transcriptomics of the liver reveals potential targets of NASH with fibrosis
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49. Single Cell and Single Nucleus RNA-Seq Reveal Cellular Heterogeneity and Homeostatic Regulatory Networks in Adult Mouse Stria Vascularis
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50. Single-cell atlas of keratoconus corneas revealed aberrant transcriptional signatures and implicated mechanical stretch as a trigger for keratoconus pathogenesis
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52. Generative adversarial networks simulate gene expression and predict perturbations in single cells
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64. Network Medicine in Pathobiology
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83. Network inference in systems biology: recent developments, challenges, and applications
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86. A differentiation roadmap of murine placentation at single-cell resolution
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87. Impact of constitutional TET2 haploinsufficiency on molecular and clinical phenotype in humans
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88. Single-cell Transcriptome Profiling reveals Dermal and Epithelial cell fate decisions during Embryonic Hair Follicle Development
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89. Tracing cell-type evolution by cross-species comparison of cell atlases
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90. Single‐cell transcriptomics reveal temporal dynamics of critical regulators of germ cell fate during mouse sex determination
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91. Limited access to antigen drives generation of early B cell memory while restraining the plasmablast response
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92. Comprehensive investigations revealed consistent pathophysiological alterations after vaccination with COVID-19 vaccines
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93. A growth factor–expressing macrophage subpopulation orchestrates regenerative inflammation via GDF-15
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94. Dissecting the Single-Cell Transcriptome Network of Immune Environment Underlying Cervical Premalignant Lesion, Cervical Cancer and Metastatic Lymph Nodes
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