A density-independent rigidity transition in biological tissues

Bi, Dapeng, Lopez, J. H., Schwarz, J. M., Manning, M. Lisa·2015·Nature Physics

Cited by (786)

Items 201–300 of 786

  1. Topological data analysis of collective and individual epithelial cells using persistent homology of loops
    Dhananjay Bhaskar, William Y. Zhang, Ian Y. Wong · 2021 · Soft Matter
  2. Coordinated tractions increase the size of a collectively moving pack in a cell monolayer
    Aashrith Saraswathibhatla, Silke Henkes, Emmett E. Galles, Rastko Sknepnek, Jacob Notbohm · 2021 · Extreme Mechanics Letters
  3. Varied solutions to multicellularity: The biophysical and evolutionary consequences of diverse intercellular bonds
    Thomas C. Day, Pedro Márquez-Zacarías, Pablo Bravo, Aawaz R. Pokhrel, Kathryn A. MacGillivray, William C. Ratcliff, Peter J. Yunker · 2022 · Biophysics Reviews
  4. Instabilities and Geometry of Growing Tissues
    Doron Grossman, Jean‐François Joanny · 2022 · Physical Review Letters
  5. Constitutive model for the rheology of biological tissue
    Suzanne M. Fielding, James O. Cochran, Junxiang Huang, Dapeng Bi, Maria Cristina Marchetti · 2023 · Physical review. E
  6. Modeling, signaling and cytoskeleton dynamics: integrated modeling‐experimental frameworks in cell migration
    Meng Sun, Muhammad Hamid Zaman · 2016 · WIREs Systems Biology and Medicine
  7. Cell-to-cell variation sets a tissue-rheology–dependent bound on collective gradient sensing
    Brian A. Camley, Wouter‐Jan Rappel · 2017 · Proceedings of the National Academy of Sciences
  8. Cell-Size Pleomorphism Drives Aberrant Clone Dispersal in Proliferating Epithelia
    Subramanian P. Ramanathan, Matej Krajnc, Matthew C. Gibson · 2019 · Developmental Cell
  9. The Interplay Between Cell-Cell and Cell-Matrix Forces Regulates Cell Migration Dynamics
    Apratim Bajpai, Jie Tong, Weiyi Qian, Yansong Peng, Weiqiang Chen · 2019 · Biophysical Journal
  10. A minimal model for structure, dynamics, and tension of monolayered cell colonies
    Debarati Sarkar, Gerhard Gompper, Jens Elgeti · 2021 · Communications Physics
  11. Understanding Slow and Heterogeneous Dynamics in Model Supercooled Glass-Forming Liquids
    Indrajit Tah, Anoop Mutneja, Smarajit Karmakar · 2021 · ACS Omega
  12. Energetic rigidity. II. Applications in examples of biological and underconstrained materials
    Ojan Khatib Damavandi, Varda F. Hagh, Christian D. Santangelo, M. Lisa Manning · 2022 · Physical review. E
  13. Polar Fluctuations Lead to Extensile Nematic Behavior in Confluent Tissues
    Andrew Killeen, Thibault Bertrand, Chiu Fan Lee · 2022 · Physical Review Letters
  14. Active Forces in Confluent Cell Monolayers
    Guanming Zhang, Julia M. Yeomans · 2023 · Physical Review Letters
  15. Structure and Rheology in Vertex Models under Cell-Shape-Dependent Active Stresses
    Shao‐Zhen Lin, Matthias Merkel, Jean-François Rupprecht · 2023 · Physical Review Letters
  16. Shape-Tension Coupling Produces Nematic Order in an Epithelium Vertex Model
    Jan Rozman, Julia M. Yeomans, Rastko Sknepnek · 2023 · Physical Review Letters
  17. Active hole formation in epithelioid tissues
    Jian-Qing Lv, Pengcheng Chen, Yun-Ping Chen, Haoyu Liu, Shi-Da Wang, Jianbo Bai, Cheng-Lin Lv, Yue Li, Yue Shao, Xi‐Qiao Feng et al. · 2024 · Nature Physics
  18. Robust statistical properties of T1 transitions in a multi-phase field model of cell monolayers
    Harish P Jain, Axel Voigt, Luiza Angheluta · 2023 · Scientific Reports
  19. 3D Shape of Epithelial Cells on Curved Substrates
    Nicolas Harmand, Anqi Huang, Sylvie Hénon · 2021 · Physical Review X
  20. The geometric basis of epithelial convergent extension
    Fridtjof Brauns, Nikolas H Claussen, Matthew F Lefebvre, Eric F. Wieschaus, Boris I. Shraiman · 2024 · eLife
  21. Non-monotonic fluidization generated by fluctuating edge tensions in confluent tissues
    Takaki Yamamoto, Daniel M. Sussman, Tatsuo Shibata, M. Lisa Manning · 2022 · Soft Matter
  22. Mechanobiology of Epithelia From the Perspective of Extracellular Matrix Heterogeneity
    Aleksandra N. Kozyrina, Teodora Piskova, Jacopo Di Russo · 2020 · Frontiers in Bioengineering and Biotechnology
  23. Aging in thermal active glasses
    Giulia Janzen, Liesbeth M. C. Janssen · 2022 · Physical Review Research
  24. How adherens junctions move cells during collective migration
    Shafali Gupta, Alpha S. Yap · 2021 · Faculty Reviews
  25. Active Instability and Nonlinear Dynamics of Cell-Cell Junctions
    Matej Krajnc, Tomer Stern, Clément Zankoc · 2021 · Physical Review Letters
  26. Configurational fingerprints of multicellular living systems
    Haiqian Yang, Adrian F. Pegoraro, Yulong Han, Wenhui Tang, Rohan Abeyaratne, Dapeng Bi, Ming Guo · 2021 · Proceedings of the National Academy of Sciences
  27. Bio-chemo-mechanical coupling models of soft biological materials: A review
    Shu-Yi Sun, Huanxin Zhang, Wei Ping Fang, Xindong Chen, Bo Li, Xi‐Qiao Feng · 2022 · Advances in applied mechanics
  28. Coherent Timescales and Mechanical Structure of Multicellular Aggregates
    Miao Yu, Aria Mahtabfar, Paul Beelen, Yasir Demiryurek, David I. Shreiber, Jeffrey D. Zahn, Ramsey A. Foty, Liping Liu, Hao Lin · 2018 · Biophysical Journal
  29. Soft-grain compression: Beyond the jamming point
    Thi-Lo Vu, Jonathan Barés · 2019 · Physical review. E
  30. Softness, anomalous dynamics, and fractal-like energy landscape in model cell tissues
    Yan-Wei Li, Leon Loh Yeong Wei, Matteo Paoluzzi, Massimo Pica Ciamarra · 2021 · Physical review. E
  31. Influence of proliferation on the motions of epithelial monolayers invading adherent strips
    Estelle Gauquelin, Sham Tlili, Cyprien Gay, Grégoire Peyret, René‐Marc Mège, Marc-Antoine Fardin, Benoît Ladoux · 2019 · Soft Matter
  32. Linear viscoelastic response of the vertex model with internal and external dissipation: Normal modes analysis
    Sijie Tong, Rastko Sknepnek, Andrej Košmrlj · 2023 · Physical Review Research
  33. Tissue Flows Are Tuned by Actomyosin-Dependent Mechanics in Developing Embryos
    R. Marisol Herrera-Perez, Christian Cupo, Cole Allan, Alicia B. Dagle, Karen E. Kasza · 2023 · PRX Life
  34. Cell shapes and patterns as quantitative indicators of tissue stress in the plant epidermis
    Sangwoo Kim, Sascha Hilgenfeldt · 2015 · Soft Matter
  35. Surface Immobilized E‐Cadherin Mimetic Peptide Regulates the Adhesion and Clustering of Epithelial Cells
    Jie Li, Jacopo Di Russo, Ximeng Hua, Zhiqin Chu, Joachim Pius Spatz, Qiang Wei · 2019 · Advanced Healthcare Materials
  36. Topological Metric Detects Hidden Order in Disordered Media
    Dominic J. Skinner, Boya Song, Hannah Jeckel, Eric Jelli, Knut Drescher, Jörn Dunkel · 2021 · Physical Review Letters
  37. Development of a New 3D Hybrid Model for Epithelia Morphogenesis
    Filippos Ioannou, Malik Ali A. Dawi, Robert J. Tetley, Yanlan Mao, José J. Muñoz · 2020 · Frontiers in Bioengineering and Biotechnology
  38. Nonlinear and nonlocal elasticity in coarse-grained differential-tension models of epithelia
    Pierre A. Haas, Raymond E. Goldstein · 2019 · Physical review. E
  39. Instability and fingering of interfaces in growing tissue
    Tobias Büscher, Angel Luis Diez, Gerhard Gompper, Jens Elgeti · 2020 · New Journal of Physics
  40. The role of non-affine deformations in the elastic behavior of the cellular vertex model
    Michael F. Staddon, Arthur Hernandez, Mark J. Bowick, Michael Moshe, Maria Cristina Marchetti · 2023 · Soft Matter
  41. A perspective on active glassy dynamics in biological systems
    Souvik Sadhukhan, Subhodeep Dey, Smarajit Karmakar, Saroj Kumar Nandi · 2024 · The European Physical Journal Special Topics
  42. Mechanics of epithelial tissue formation
    Ruben van Drongelen, Tania Vazquez-Faci, Teun A.P.M. Huijben, Maurijn van der Zee, Timon Idema · 2018 · Journal of Theoretical Biology
  43. Interplay of curvature and rigidity in shape-based models of confluent tissue
    Daniel M. Sussman · 2020 · Physical Review Research
  44. Leader-cell-driven epithelial sheet fingering
    Yanjun Yang, Herbert Levine · 2020 · Physical Biology
  45. Deformation and relaxation of an incompressible viscoelastic body with surface viscoelasticity
    Liping Liu, Miao Yu, Hao Lin, Ramsey A. Foty · 2016 · Journal of the Mechanics and Physics of Solids
  46. Universal Features of Metastable State Energies in Cellular Matter
    Sangwoo Kim, Yiliang Wang, Sascha Hilgenfeldt · 2018 · Physical Review Letters
  47. Contact inhibition of locomotion and mechanical cross-talk between cell–cell and cell–substrate adhesion determine the pattern of junctional tension in epithelial cell aggregates
    Luke Coburn, Hender Lopez Silva, Benjamin J. Caldwell, Elliott Moussa, Chloe X. Yap, Rashmi Priya, Adrian Noppe, Anthony P. Roberts, Vladimir Lobaskin, Alpha S. Yap et al. · 2016 · Molecular Biology of the Cell
  48. On the origin of universal cell shape variability in confluent epithelial monolayers
    Souvik Sadhukhan, Saroj Kumar Nandi · 2022 · eLife
  49. Activation of Topological Defects Induces a Brittle-to-Ductile Transition in Epithelial Monolayers
    Yixia Chen, Qigan Gao, Jingchen Li, Fangtao Mao, Ruowen Tang, Hongyuan Jiang · 2022 · Physical Review Letters
  50. Short-term bioelectric stimulation of collective cell migration in tissues reprograms long-term supracellular dynamics
    Abraham E. Wolf, Matthew A. Heinrich, Isaac B. Breinyn, Tom J. Zajdel, Daniel J. Cohen · 2022 · PNAS Nexus
  51. Adhesion strength between cells regulate nonmonotonic growth by a biomechanical feedback mechanism
    Abdul N. Malmi-Kakkada, Sumit Sinha, Xin Li, Dave Thirumalai · 2022 · Biophysical Journal
  52. E-cadherin biomaterials reprogram collective cell migration and cell cycling by forcing homeostatic conditions
    Kevin Suh, Youn Kyoung Cho, Isaac B. Breinyn, Daniel J. Cohen · 2024 · Cell Reports
  53. Elasticity and rheology of auxetic granular metamaterials
    Daan Haver, Daniel Acuña, Shahram Janbaz, Edan Lerner, Gustavo Düring, Corentin Coulais · 2024 · Proceedings of the National Academy of Sciences
  54. Anomalous elasticity of a cellular tissue vertex model
    Arthur Hernandez, Michael F. Staddon, Mark J. Bowick, Maria Cristina Marchetti, Michael Moshe · 2022 · Physical review. E
  55. Linear and nonlinear mechanical responses can be quite different in models for biological tissues
    Preeti Sahu, Janice Kang, Gonca Erdemci-Tandogan, M. Lisa Manning · 2020 · Soft Matter
  56. Local Yield and Compliance in Active Cell Monolayers
    Austin Hopkins, Michael Chiang, Benjamín Loewe, Davide Marenduzzo, Maria Cristina Marchetti · 2022 · Physical Review Letters
  57. Topologically-protected interior for three-dimensional confluent cellular collectives
    Tao Zhang, Jennifer M. Schwarz · 2022 · Physical Review Research
  58. Visualizing slow internal relaxations in a two-dimensional glassy system
    Yanshuang Chen, Zefang Ye, Kexin Wang, Jiping Huang, Hua Tong, Yuliang Jin, Ke Chen, Hajime Tanaka, Peng Tan · 2023 · Nature Physics
  59. A shape-driven reentrant jamming transition in confluent monolayers of synthetic cell-mimics
    Pragya Arora, Souvik Sadhukhan, Saroj Kumar Nandi, Dapeng Bi, Ajay Kumar Sood, Rajesh Ganapathy · 2024 · Nature Communications
  60. A hybrid computational model to explore the topological characteristics of epithelial tissues
    Ismael González‐Valverde, José Manuel García‐Aznar · 2017 · International Journal for Numerical Methods in Biomedical Engineering
  61. Tissue Flow Induces Cell Shape Changes During Organogenesis
    Gonca Erdemci-Tandogan, Madeline J. Clark, Jeffrey D. Amack, M. Lisa Manning · 2018 · Biophysical Journal
  62. Apical Junctional Fluctuations Lead to Cell Flow while Maintaining Epithelial Integrity
    Satoru Okuda, Erina Kuranaga, Katsuhiko Sato · 2019 · Biophysical Journal
  63. EpiGraph: an open-source platform to quantify epithelial organization
    Pablo Vicente‐Munuera, Pedro Gómez‐Gálvez, Robert J. Tetley, Cristina Forja, Antonio Tagua, Marta Letrán, Melda Tozluoǧlu, Yanlan Mao, Luis M. Escudero · 2019 · Bioinformatics
  64. Cell-type-specific mechanical response and myosin dynamics during retinal lens development in Drosophila
    Laura Blackie, Rhian F. Walther, Michael F. Staddon, Shiladitya Banerjee, Franck Pichaud · 2020 · Molecular Biology of the Cell
  65. Topological and geometrical quantities in active cellular structures
    D. Wenzel, S. Praetorius, A. Voigt · 2019 · The Journal of Chemical Physics
  66. Signature of dynamical heterogeneity in spatial correlations of particle displacement and its temporal evolution in supercooled liquids
    Indrajit Tah, Smarajit Karmakar · 2020 · Physical Review Research
  67. Mechanical control of cell fate decisions in the skin epidermis
    Preeti Sahu, Sara Monteiro-Ferreira, Sara Canato, Raquel Maia Soares, Adriana Sánchez‐Danés, Édouard Hannezo · 2025 · Nature Communications
  68. Clustering and ordering in cell assemblies with generic asymmetric aligning interactions
    Thibault Bertrand, Joseph d'Alessandro, Ananyo Maitra, Shreyansh Jain, Barbara Mercier, René‐Marc Mège, Benoît Ladoux, Raphaël Voituriez · 2024 · Physical Review Research
  69. Geometry Adaptation of Protrusion and Polarity Dynamics in Confined Cell Migration
    David B. Brückner, Matthew S. Schmitt, Alexandra Fink, Georg Ladurner, Johannes Flommersfeld, Nicolas Arlt, Édouard Hannezo, Joachim Oskar Rädler, Chase P. Broedersz · 2022 · Physical Review X
  70. Differences in boundary behavior in the 3D vertex and Voronoi models
    Elizabeth Lawson-Keister, Tao Zhang, Fatemeh Nazari, François Fagotto, M. Lisa Manning · 2024 · PLoS Computational Biology
  71. Tension Remodeling Regulates Topological Transitions in Epithelial Tissues
    Fernanda Pérez-Verdugo, Shiladitya Banerjee · 2023 · PRX Life
  72. Confined cell migration along extracellular matrix space in vivo
    Oleksandr Chepizhko, Josep-Maria Armengol-Collado, Stephanie Alexander, Esther Wagena, Bettina Weigelin, Luca Giomi, Peter Friedl, Stefano Zapperi, Caterina A. M. La Porta · 2024 · Proceedings of the National Academy of Sciences
  73. Rigidity of epithelial tissues as a double optimization problem
    Sadjad Arzash, Indrajit Tah, Andrea J. Liu, M. Lisa Manning · 2025 · Physical Review Research
  74. Jamming with Tunable Roughness
    Harukuni Ikeda, Carolina Brito, Matthieu Wyart, Francesco Zamponi · 2020 · Physical Review Letters
  75. Hyperuniformity and density fluctuations at a rigidity transition in a model of biological tissues
    Yuanjian Zheng, Yan-Wei Li, Massimo Pica Ciamarra · 2020 · Soft Matter
  76. The role of viscoelasticity in long time cell rearrangement
    Ivana Pajić‐Lijaković, Milan S. Milivojevic · 2022 · Progress in Biophysics and Molecular Biology
  77. Polarity-JaM: an image analysis toolbox for cell polarity, junction and morphology quantification
    Wolfgang Giese, Jan Philipp Albrecht, Olya Oppenheim, Emir Bora Akmeriç, Julia Kraxner, Deborah Schmidt, Kyle Harrington, Holger Gerhardt · 2025 · Nature Communications
  78. A continuous constraint satisfaction problem for the rigidity transition in confluent tissues
    Pierfrancesco Urbani · 2023 · Journal of Physics A Mathematical and Theoretical
  79. Cadherins and the cortex: A matter of time?
    Ivar Noordstra, Richard G. Morris, Alpha S. Yap · 2023 · Current Opinion in Cell Biology
  80. Elasticity-controlled jamming criticality in soft composite solids
    Yiqiu Zhao, Haitao Hu, Yulu Huang, Hanqing Liu, Caishan Yan, Chang Gang Xu, Rui Zhang, Yifan Wang, Qin Xu · 2024 · Nature Communications
  81. Cell Division and Motility Enable Hexatic Order in Biological Tissues
    Y. W. Tang, Siyuan Chen, Mark J. Bowick, Dapeng Bi · 2024 · Physical Review Letters
  82. Perspectives in collective cell migration – moving forward
    Samantha J. Stehbens, Elena Scarpa, Melanie D. White · 2024 · Journal of Cell Science
  83. Vertex model with internal dissipation enables sustained flows
    Jan Rozman, KVS Chaithanya, Julia M. Yeomans, Rastko Sknepnek · 2025 · Nature Communications
  84. Fluidization and anomalous density fluctuations in 2D Voronoi cell tissues with pulsating activity
    Zhu-Qin Li, Qun‐Li Lei, Yu‐qiang Ma · 2025 · Proceedings of the National Academy of Sciences
  85. Living cells on the move
    Ricard Alert, Xavier Trepat · 2021 · Physics Today
  86. Modeling epithelial tissues as active-elastic sheets reproduce contraction pulses and predict rip resistance
    Shahaf Armon, Matthew S. Bull, Avraham Moriel, Hillel Aharoni, Manu Prakash · 2021 · Communications Physics
  87. Role of the supracellular actomyosin cable during epithelial wound healing
    Yanjun Yang, Herbert Levine · 2018 · Soft Matter
  88. Viscoelastic mechanics of living cells
    Hui Zhou, Ruye Liu, Yizhou Xu, Jierui Fan, Xinyue Liu, Longquan Chen, Qiang Wei · 2025 · Physics of Life Reviews
  89. Heterophilic cell–cell adhesion of atypical cadherins Fat and Dachsous regulate epithelial cell size dynamics duringDrosophilathorax morphogenesis
    Amit Kumar, Mohd Suhail Rizvi, Thamarailingam Athilingam, Saurabh Singh Parihar, Pradip Sinha · 2019 · Molecular Biology of the Cell
  90. Geometric signatures of tissue surface tension in a three-dimensional model of confluent tissue
    Preeti Sahu, Jennifer M. Schwarz, M. Lisa Manning · 2021 · New Journal of Physics
  91. Self-organized collective cell behaviors as design principles for synthetic developmental biology
    Jonas Hartmann, Roberto Mayor · 2022 · Seminars in Cell and Developmental Biology
  92. Powering morphogenesis: multiscale challenges at the interface of cell adhesion and the cytoskeleton
    Rodrigo Fernández‐González, Mark A. Peifer · 2022 · Molecular Biology of the Cell
  93. Interplay between substrate rigidity and tissue fluidity regulates cell monolayer spreading
    Michael F. Staddon, Michael P. Murrell, Shiladitya Banerjee · 2022 · Soft Matter
  94. Generative models of morphogenesis in developmental biology
    Namid Stillman, Roberto Mayor · 2023 · Seminars in Cell and Developmental Biology
  95. Helical vasculogenesis driven by cell chirality
    Haokang Zhang, Tasnif Rahman, Shuhan Lu, Alejandro Pablo Adam, Leo Q. Wan · 2024 · Science Advances
  96. Universality in the Mechanical Behavior of Vertex Models for Biological Tissues
    Ojan Khatib Damavandi, Sadjad Arzash, Elizabeth Lawson-Keister, M. Lisa Manning · 2025 · PRX Life
  97. A multicellular star-shaped actin network underpins epithelial organization and connectivity
    Amlan Barai, Matis Soleilhac, Wang Xi, Shao‐Zhen Lin, Marc Karnat, Elsa Bazellières, Sylvie Richelme, Brice Lecouffe, Claire Chardès, Dominique D. Berrebi et al. · 2025 · Nature Communications
  98. Cell jamming, stratification and p63 expression in cultivated human corneal epithelial cell sheets
    Koichi Baba, Kei Sasaki, Mio Morita, Tomoyo Tanaka, Yosuke Teranishi, Takahiro Ogasawara, Yoshinori Oie, Izumi Kusumi, Masukazu Inoie, Ken‐ichiro Hata et al. · 2020 · Scientific Reports
  99. Multiple dynamic regimes in a coarsening foam
    Fabio Giavazzi, Veronique Trappe, Roberto Cerbino · 2020 · Journal of Physics Condensed Matter
  100. Quantifying the link between local structure and cellular rearrangements using information in models of biological tissues
    Indrajit Tah, Tristan A. Sharp, Andrea J. Liu, Daniel M. Sussman · 2021 · Soft Matter