A density-independent rigidity transition in biological tissues
Bi, Dapeng, Lopez, J. H., Schwarz, J. M., Manning, M. Lisa·2015·Nature Physics
Cited by (786)
Items 301–400 of 786
- Tyssue: an epithelium simulation librarySophie Theis, Magali Suzanne, Guillaume Gay · 2021 · The Journal of Open Source Software
- Biomechanics of cells and subcellular components: A comprehensive review of computational models and applicationsChengyuan Wang, Si Li, Adesola S. Ademiloye, Perumal Nithiarasu · 2021 · International Journal for Numerical Methods in Biomedical Engineering
- Septins regulate border cell surface geometry, shape, and motility downstream of Rho in DrosophilaAllison M. Gabbert, Joseph P. Campanale, James A. Mondo, Noah Mitchell, Adele Myers, Sebastian J. Streichan, Nina Miolane, Denise J. Montell · 2023 · Developmental Cell
- Incompatibility-driven growth and size control during developmentAlexander Erlich, Giuseppe Zurlo · 2024 · Journal of the Mechanics and Physics of Solids
- A minimal vertex model explains how the amnioserosa avoids fluidization during Drosophila dorsal closureIndrajit Tah, Daniel Haertter, Janice M. Crawford, Daniel P. Kiehart, Christoph F. Schmidt, Andrea J. Liu · 2024 · Proceedings of the National Academy of Sciences
- Activity-induced annealing leads to a ductile-to-brittle transition in amorphous solidsRishabh Sharma, Smarajit Karmakar · 2025 · Nature Physics
- Complete mathematical theory of the jamming transition: A perspectiveAlessio Zaccone · 2025 · Journal of Applied Physics
- Spatial Fluctuations at Vertices of Epithelial Layers: Quantification of Regulation by Rho PathwayÉtienne Fodor, Vishwajeet Mehandia, Jordi Comelles, Raghavan Thiagarajan, Nir S. Gov, Paolo Visco, Frédéric van Wijland, Daniel Riveline · 2018 · Biophysical Journal
- Probing three-dimensional collective cancer invasion with DIGMEAmani A. Alobaidi, Bo Sun · 2017 · Cancer Convergence
- Viscoelastic voyages – Biophysical perspectives on cell intercalation during Drosophila gastrulationDinah Loerke, J. Todd Blankenship · 2019 · Seminars in Cell and Developmental Biology
- Compaction Dynamics during Progenitor Cell Self-Assembly Reveal Granular MechanicsBart Smeets, Jiří Pešek, Thomas Deckers, Gabriella Nilsson Hall, Maxim Cuvelier, Steven Ongenae, Veerle Bloemen, Frank P. Luyten, Ioannis Papantoniou, Herman Ramón · 2020 · Matter
- Structural universality in disordered packings with size and shape polydispersityYe Yuan, Wei Deng, Shuixiang Li · 2020 · Soft Matter
- Adaptive viscoelasticity of epithelial cell junctions: from models to methodsKate E. Cavanaugh, Michael F. Staddon, Shiladitya Banerjee, Margaret L. Gardel · 2020 · Current Opinion in Genetics & Development
- Single-cell mechanical analysis and tension quantification via electrodeformation relaxationSeyedsajad Moazzeni, Yasir Demiryurek, Miao Yu, David I. Shreiber, Jeffrey D. Zahn, Jerry W. Shan, Ramsey A. Foty, Liping Liu, Hao Lin · 2021 · Physical review. E
- Paxillin promotes breast tumor collective cell invasion through maintenance of adherens junction integrityWeiyi Xu, Kyle M. Alpha, Nicholas M. Zehrbach, Christopher E. Turner · 2021 · Molecular Biology of the Cell
- Biomechanical Feedback Strengthens Jammed Cellular PackingsPaweł Gniewek, Carl F. Schreck, Oskar Hallatschek · 2019 · Physical Review Letters
- Human brain microvascular endothelial cell pairs model tissue-level blood–brain barrier functionBlakely B. O’Connor, Thomas Grevesse, John F. Zimmerman, Herdeline Ann M. Ardoña, Jorge Jiménez, Dimitrios Bitounis, Philip Demokritou, Kevin Kit Parker · 2020 · Integrative Biology
- The rearrangement of co-cultured cellular model systems via collective cell migrationIvana Pajić‐Lijaković, Raluca Eftimie, Milan S. Milivojevic, Stéphane Bordas · 2022 · Seminars in Cell and Developmental Biology
- Geometric theory of mechanical screening in two-dimensional solidsNoemie S. Livne, Amit Schiller, Michael Moshe · 2023 · Physical review. E
- Pulling the strings on solid-to-liquid phase transitions in cell collectivesDiana Pinheiro, Jennifer A. Mitchel · 2024 · Current Opinion in Cell Biology
- Role of viscoelasticity in the appearance of low-Reynolds turbulence: considerations for modellingIvana Pajić‐Lijaković, Milan S. Milivojevic, P. V. E. McClintock · 2024 · Journal of Biological Engineering
- Environmentally dependent and independent control of 3D cell shapeLucas Dent, Nathan Curry, Hugh Sparks, Vicky Bousgouni, Vincent Maioli, Sunil Kumar, Ian Munro, Francesca Butera, Ian Jones, Mar Arias-García et al. · 2024 · Cell Reports
- Mechanochemical coupling of cell shape and organ function optimizes heart size and contractile efficiency in zebrafishToby G. R. Andrews, Jake Cornwall-Scoones, Marie‐Christine Ramel, Kirti Gupta, James Briscoe, Rashmi Priya · 2025 · Developmental Cell
- Inferring statistical properties of 3D cell geometry from 2D slicesTristan A. Sharp, Matthias Merkel, M. Lisa Manning, Andrea J. Liu · 2019 · PLoS ONE
- Physics approaches to the spatial distribution of immune cells in tumorsClare C. Yu, Juliana C. Wortman, Ting-Fang He, Shawn T. Solomon, Bob Zhang, Anthony Rosario, Roger Wang, Travis Yiwey Tu, Daniel D. Schmolze, Yuan Yuan et al. · 2020 · Reports on Progress in Physics
- Poisson-bracket formulation of the dynamics of fluids of deformable particlesArthur Hernandez, Maria Cristina Marchetti · 2021 · Physical review. E
- Mechanical Regulation of Epithelial Tissue HomeostasisSara Kaliman, Maxime Hubert, Carina Wollnik, Lovro Nuić, Damir Vurnek, Simone Gehrer, Jakov Lovrić, Diana Dudziak, Florian Rehfeldt, Ana‐Sunčana Smith · 2021 · Physical Review X
- A quantitative biophysical principle to explain the 3D cellular connectivity in curved epitheliaPedro Gómez‐Gálvez, Pablo Vicente‐Munuera, Samira Anbari, Antonio Tagua, Carmen Gordillo-Vázquez, Jesuś A. Andrés-San Román, Daniel Franco-Barranco, Ana M. Palacios, Antonio Velasco, Carlos Capitán-Agudo et al. · 2022 · Cell Systems
- Immotile Active Matter: Activity from Death and ReproductionArben Kalziqi, David Yanni, Jacob F. Thomas, Siu Lung Ng, Skanda Vivek, Brian K. Hammer, Peter J. Yunker · 2018 · Physical Review Letters
- Ciliary flocking and emergent instabilities enable collective agility in a non-neuromuscular animalMatthew S. Bull, Vivek N. Prakash, Manu Prakash · 2021 · arXiv (Cornell University)
- Vertex models capturing subcellular scales in epithelial tissuesZoë Lange, Franziska Matthäus, Mingfeng Qiu · 2025 · PLoS Computational Biology
- A novel tool for the unbiased characterization of epithelial monolayer development in cultureNicole S. Dawney, Christian M. Cammarota, Qingyuan Jia, Alicia Shipley, Joseph A. Glichowski, Muskaan Vasandani, Tara M. Finegan, Dan T. Bergstralh · 2023 · Molecular Biology of the Cell
- The geometric basis of epithelial convergent extensionFridtjof Brauns, Nikolas H Claussen, Matthew F Lefebvre, Eric F. Wieschaus, Boris I. Shraiman · 2024 · eLife
- Emergence of rigidity percolation in flowing granular systemsHor Dashti-Naserabadi, Abbas Ali Saberi, S. H. Ebrahimnazhad Rahbari, J urgen Kurths · 2023 · Science Advances
- E-cadherin tunes tissue mechanical behavior before and during morphogenetic tissue flowsXun Wang, Christian Cupo, Sassan Ostvar, Andrew D. Countryman, Karen E. Kasza · 2024 · Current Biology
- Jamming of nephron-forming niches in the developing mouse kidney creates cyclical mechanical stressesLouis S. Prahl, Jiageng Liu, John M. Viola, Aria Zheyuan Huang, Trevor J. Chan, Gabriela Hayward-Lara, Catherine M. Porter, Chenjun Shi, Jitao Zhang, Alex J. Hughes · 2024 · Nature Materials
- Depletion attraction impairs the plasticity of emulsions flowing in a constrictionIaroslava Golovkova, Lorraine Montel, Élie Wandersman, Thibault Bertrand, Alexis Michel Prevost, Léa-Lætitia Pontani · 2020 · Soft Matter
- Shear-induced orientational ordering in an active glass formerRituparno Mandal, Peter Sollich · 2021 · Proceedings of the National Academy of Sciences
- Mechanical Regulation of Limb Bud FormationYvenn Sermeus, Jef Vangheel, Liesbet Geris, Bart Smeets, Przemko Tylżanowski · 2022 · Cells
- Biophysical models of early mammalian embryogenesisAlaina J. Cockerell, Liam Wright, Anish Dattani, Ge Guo, Austin G Smith, Krasimira T. Tsaneva-Atanasova, David M. Richards · 2023 · Stem Cell Reports
- PolyHoop: Soft particle and tissue dynamics with topological transitionsRoman Vetter, Steve Vincent Maurice Runser, Dagmar Iber · 2024 · Computer Physics Communications
- Cationic amphiphilic polysaccharide nanoballs: protein stabilization and intracellular delivery by nano-encapsulationHaruko Takahashi, Yoshiro Tahara, Shin‐ichi Sawada, Kazunari Akiyoshi · 2013 · Biomaterials Science
- Contrasting the dynamics of elastic and non-elastic deformations across an experimental colloidal Martensitic transitionSaswati Ganguly, Priti S. Mohanty, Peter Schurtenberger, Surajit Sengupta, Anand Yethiraj · 2017 · Soft Matter
- The tumor suppressor p53 can promote collective cellular migrationShijie He, Christopher V. Carman, Jung‐Hyun Lee, Bo Lan, Stephan A. Koehler, Lior Atia, Chan Young Park, Jae Hun Kim, Jennifer A. Mitchel, Jin‐Ah Park et al. · 2019 · PLoS ONE
- Configurational entropy is an intrinsic driver of tissue structural heterogeneityVasudha Srivastava, Jennifer L. Hu, James C. Garbe, Boris A. Veytsman, Sundus Shalabi, David Yllanes, Matt W. Thomson, Mark A. LaBarge, Greg Huber, Zev J. Gartner · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Cell Sorting in an Active Nematic Vertex ModelJan Rozman, Julia M. Yeomans · 2024 · Physical Review Letters
- Large-scale control over collective cell migration using light-activated epidermal growth factor receptorsKevin Suh, Richard H. Thornton, Long Nguyen, Payam E. Farahani, Daniel J. Cohen, Jared E. Toettcher · 2025 · Cell Systems
- Differential Elasticity Affects Lineage Segregation of Embryonic Stem CellsChristine M. Ritter, Tianxiang Ma, Natascha Leijnse, Younes Farhangi Barooji, William Hamilton, Joshua M. Brickman, Amin Doostmohammadi, Lene Broeng Oddershede · 2025 · Physical Review Letters
- Active foam dynamics of tissue spheroid fusionSteven Ongenae, Hanna M. Svitina, Tom E. R. Belpaire, Jef Vangheel, Tobie Martens, Pieter Vanden Berghe, Ioannis Papantoniou, Bart Smeets · 2025 · Nature Communications
- Enhancing Cancer Cell Collective Motion and Speeding up Confluent Endothelial Dynamics through Cancer Cell Invasion and AggregationHsiang-Ying Chen, Yi‐Teng Hsiao, Shu‐Chen Liu, Tien Hsu, Wei‐Yen Woon, Lin I · 2018 · Physical Review Letters
- Chromatic neuronal jamming in a primitive brainMargarita Khariton, Xian Kong, Jian Qin, Bo Wang · 2020 · Nature Physics
- Mechanical compression enhances ciliary beating through cytoskeleton remodeling in human nasal epithelial cellsSeong Gyu Lee, Sang‐Nam Lee, Junki Baek, Joo‐Heon Yoon, Hyungsuk Lee · 2021 · Acta Biomaterialia
- A computational modeling of invadopodia protrusion into an extracellular matrix fiber networkMin‐Cheol Kim, Ran Li, Rohan Abeyaratne, Roger Dale Kamm, H. Harry Asada · 2022 · Scientific Reports
- Random Traction Yielding Transition in Epithelial TissuesAboutaleb Amiri, Charlie Duclut, Frank Jülicher, Marko A. Popovic · 2023 · Physical Review Letters
- In Pursuit of Designing Multicellular Engineered Living Systems: A Fluid Mechanical PerspectiveJean Carlos Serrano, Satish Kumar Gupta, Roger Dale Kamm, Ming Guo · 2020 · Annual Review of Fluid Mechanics
- Scaling Theory for the Frictionless Unjamming TransitionKabir Ramola, Bulbul Chakraborty · 2017 · Physical Review Letters
- Role of cell polarity dynamics and motility in pattern formation due to contact-dependent signallingSupriya Bajpai, Ranganathan Prabhakar, Raghunath Chelakkot, Mandar M. Inamdar · 2021 · Journal of The Royal Society Interface
- Interfacial Organization and Forces Arising from Epithelial–Cancerous Monolayer InteractionsLiu‐Yuan Guan, Shao‐Zhen Lin, Pengcheng Chen, Jian-Qing Lv, Bo Li, Xi‐Qiao Feng · 2023 · ACS Nano
- Mechanochemical dynamics of collective cells and hierarchical topological defects in multicellular lumensPengyu Yu, Yue Li, Wei Ping Fang, Xi‐Qiao Feng, Bo Li · 2024 · Science Advances
- Rigidity in mechanical biological networksM. Lisa Manning · 2024 · Current Biology
- Yielding behaviour of active particles in bulk and in confinementYagyik Goswami, G. V. Shivashankar, Srikanth Sastry · 2025 · Nature Physics
- F-actin dynamics regulates collective cell migration by modulating cell shape and stress correlationXiangdong Kong, Zheng Zhong, Chao Fang · 2025 · Biophysical Journal
- Dynamics phenotyping across length and time scales in collective cell migrationRachel Lee, Wolfgang Losert · 2018 · Seminars in Cell and Developmental Biology
- NTA-Co3+-His6 versus NTA-Ni2+-His6 mediated E-Cadherin surface immobilization enhances cellular tractionJacopo Di Russo, Jennifer L. Young, Adithya Balakrishnan, Amelie S. Benk, Joachim Pius Spatz · 2018 · Biomaterials
- Collective cell migration of epithelial cells driven by chiral torque generationTakaki Yamamoto, Tetsuya Hiraiwa, Tatsuo Shibata · 2020 · Physical Review Research
- Competitive coordination of the dual roles of the Hedgehog co-receptor in homophilic adhesion and signal receptionShu Yang, Ya Zhang, Chuxuan Yang, Xuefeng Wu, Sara El Oud, Rongfang Chen, Xudong Cai, Xufeng Wu, Ganhui Lan, Xiaoyan Zheng · 2021 · eLife
- Mechanics of developmental migrationDeannah G. Blackley, Jack H. Cooper, Paulina Pokorska, Aparna Ratheesh · 2021 · Seminars in Cell and Developmental Biology
- Couple stresses and discrete potentials in the vertex model of cellular monolayersOliver E. Jensen, Christopher K. Revell · 2022 · Biomechanics and Modeling in Mechanobiology
- Adapting a Plant Tissue Model to Animal Development: Introducing Cell Sliding into VirtualLeafHenri B. Wolff, Lance A. Davidson, Roeland M. H. Merks · 2019 · Bulletin of Mathematical Biology
- Mean field theory of jamming of nonspherical particles晴國 池田, Pierfrancesco Urbani, Francesco Zamponi · 2019 · Journal of Physics A Mathematical and Theoretical
- Single-cell phenomics reveals behavioural and mechanical heterogeneities underpinning collective migration during mouse anterior patterningMatthew J. Stower, Felix Zhou, Holly Hathrell, Jason Yeung, Shifaan Thowfeequ, Jonathan Godwin, Falk Schneider, B. Christoffer Lagerholm, Marco Fritzsche, Jeyan Thiyagalingam et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Tissue Active Matter: Integrating Mechanics and Signaling into Dynamical ModelsDavid B. Brückner, Édouard Hannezo · 2024 · Cold Spring Harbor Perspectives in Biology
- Continuum theory for confluent cell monolayers: Interplay between cell growth, division, and intercalationPrakhar Bandil, Franck J. Vernerey · 2023 · Journal of the Mechanics and Physics of Solids
- Multiphase field model of cells on a substrate: From three dimensional to two dimensionalMichael Chiang, Austin Hopkins, Benjamín Loewe, Davide Marenduzzo, Maria Cristina Marchetti · 2024 · Physical review. E
- Planar polarized force propagation integrates cell behavior with tissue shaping during convergent extensionShinuo Weng, Masaya Hayashi, Yasuhiro Inoue, John B. Wallingford · 2024 · Current Biology
- Origin of yield stress and mechanical plasticity in model biological tissuesAnh Q Nguyen, Junxiang Huang, Dapeng Bi · 2025 · Nature Communications
- Supracellular actomyosin assemblies: master coordinators of developmentKatja Röper · 2025 · Development
- Tissue fluidity mediates a trade-off between the speed and accuracy of multicellular patterning by cell sortingRikki M. Garner, Sean E. McGeary, Allon Moshe Klein, Sean G. Megason · 2025 · Biophysical Journal
- Modeling branching morphogenesis using materials with programmable mechanical instabilitiesAndreas P. Kourouklis, Celeste M. Nelson · 2018 · Current Opinion in Biomedical Engineering
- Jamming and force distribution in growing epithelial tissuePranav Madhikar, Jan A. Åström, Björn Baumeier, Mikko Karttunen · 2021 · Physical Review Research
- Low-temperature statistical mechanics of the Quantizer problem: Fast quenching and equilibrium cooling of the three-dimensional Voronoi liquidTobias M. Hain, Michael A. Klatt, Gerd E. Schröder-Turk · 2020 · The Journal of Chemical Physics
- Alignment interactions drive structural transitions in biological tissuesMatteo Paoluzzi, Luca Angelani, Giorgio Gosti, Maria Cristina Marchetti, Ignacio Pagonabarraga, Giancarlo Ruocco · 2021 · Physical review. E
- Differences in cell death and division rules can alter tissue rigidity and fluidizationGudur Ashrith Reddy, Parag Katira · 2022 · Soft Matter
- Computational modeling and simulation of epithelial wound closureJie Bai, Xiaowei Zeng · 2023 · Scientific Reports
- Computational Modeling of Collective Cell Migration: Mechanical and Biochemical AspectsYanjun Yang, Mohit Kumar Jolly, Herbert Levine · 2019 · Advances in experimental medicine and biology
- Matrix resistance stress: A key parameter for immobilized cell growth regulationIvana Pajić‐Lijaković, Milan S. Milivojevic, Steva Lević, Kata T. Trifković, Z. D. Stevanović, Radenko Radošević, Viktor Nedović, Branko Bugarski · 2016 · Process Biochemistry
- Force networks, torque balance and Airy stress in the planar vertex model of a confluent epitheliumOliver E. Jensen, Emma Johns, Sarah Woolner · 2020 · Proceedings of the Royal Society A Mathematical Physical and Engineering Sciences
- The Role of Tricellulin in Epithelial Jamming and Unjamming via Segmentation of Tricellular JunctionsSophie Lohmann, Costanza Giampietro, Francesca Michela Pramotton, Dunja Al‐Nuaimi, Alessandro Poli, Paolo Maiuri, Dimos Poulikakos A, Aldo Ferrari · 2020 · Advanced Science
- Minimal vertex model explains how the amnioserosa avoids fluidization during Drosophila dorsal closureIndrajit Tah, Daniel Haertter, Janice M. Crawford, Daniel P. Kiehart, Christoph F. Schmidt, Andrea J. Liu · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Critical phenomena in embryonic organizationCamilla Autorino, Nicoletta I. Petridou · 2022 · Current Opinion in Systems Biology
- Morphological instability at topological defects in a three-dimensional vertex model for spherical epitheliaOliver M. Drozdowski, Ulrich S. Schwarz · 2024 · Physical Review Research
- The cellular Potts model on disordered latticesHossein Nemati, Joost de Graaf · 2024 · Soft Matter
- N-Cadherin based adhesion and Rac1 activity regulate tension polarization in the actin cortexSeyedsajad Moazzeni, Kelly Kyker‐Snowman, Rick I. Cohen, Huan Wang, Ran Li, David I. Shreiber, Jeffrey D. Zahn, Zheng Shi, Hao Lin · 2025 · Scientific Reports
- Epithelial Layer Fluidization by Curvature-Induced UnjammingMargherita De Marzio, Amit Das, Jeffrey J. Fredberg, Dapeng Bi · 2025 · Physical Review Letters
- Junctional force patterning drives both positional order and planar polarity in the auditory epitheliaAnubhav Prakash, Julian Weninger, Nishant Singh, Sukanya Raman, Madan Rao, Karsten Kruse, Raj K. Ladher · 2025 · Nature Communications
- Laminin-defined mechanical status modulates retinal pigment epithelium phagocytosisAleksandra N. Kozyrina, Teodora Piskova, Francesca Semeraro, Iris Christine Doolaar, Taspia Prapty, Tamás Haraszti, Maxime Hubert, Reinhard Windoffer, Rudolf E. Leube, Ana‐Sunčana Smith et al. · 2025 · EMBO Reports
- Tissue phase transitions in development: more than just mechanicsLaura Rustarazo-Calvo, Karen G. Soans, Nicoletta I. Petridou · 2026 · Development
- Tissue rigidity phase transition shapes morphogen gradientsCamilla Autorino, Diana Khoromskaia, Louise Harari, Elisa Floris, H. Anne F. Booth, Cristina Pallares Cartes, Vesta Petrasiunaite, Michael W. Dorrity, Bernat Corominas‐Murtra, Zena Hadjivasiliou et al. · 2026 · Nature Cell Biology
- Modeling multicellular dynamics regulated by extracellular-matrix-mediated mechanical communication via active particles with polarized effective attractionYu Zheng, Qihui Fan, Christopher Eddy, Xiaochen Wang, Bo Sun, Fang-fu Ye, Yang Jiao · 2020 · Physical review. E
- Automatic Actin Filament Quantification and Cell Shape Modeling of Osteoblasts on Charged Ti SurfacesMartina Gruening, Jonathan Edward Dawson, Christian Völkner, Sven Neuber, Katja Fricke, Ursula van Rienen, S. Speller, Christiane A. Helm, Barbara J. Nebe · 2021 · Applied Sciences