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Evaluating the Challenges and Reproducibility of Studies Investigating DNA Methylation Signatures of Psychological Stress

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A meta-analysis uncovers the first sequence variant conferring risk of Bell’s palsy

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eQTL discovery and their association with severe equine asthma in European Warmblood horses

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Allele-Specific QTL Fine Mapping with PLASMA

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Deciphering the rules of disulfidptosis: a genome-wide signature for identifying disulfidptosis-related genes and analyzing hepatocellular carcinoma chemotherapy sensitivities

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Generalized Matrix Factorization: efficient algorithms for fitting generalized linear latent variable models to large data arrays

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Analysis of gut microbiome, host genetics, and plasma metabolites reveals gut microbiome-host interactions in the Japanese population

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Omnibus proteome-wide association study identifies 43 risk genes for Alzheimer disease dementia

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Pathway-Based Factor Analysis of Gene Expression Data Produces Highly Heritable Phenotypes That Associate with Age

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Systems Genetics as a Tool to Identify Master Genetic Regulators in Complex Disease

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RNA expression profiling of renal allografts in a nonhuman primate identifies variation in NK and endothelial gene expression

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MRPC: An R Package for Inference of Causal Graphs

Badsha, M. B., Martin, E. A., & Fu, A. Q. (2021) · Frontiers in Genetics · doi:10.3389/fgene.2021.651812 · Cited by 13

Rare variants regulate expression of nearby individual genes in multiple tissues

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ipaQTL-atlas: an atlas of intronic polyadenylation quantitative trait loci across human tissues

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Pitfalls and opportunities for applying latent variables in single-cell eQTL analyses

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An analytical framework for decoding cell type-specific genetic variation of gene regulation

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Gene expression models based on transcription factor binding events confer insight into functional cis -regulatory variants

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A flexible summary statistics-based colocalization method with application to the mucin cystic fibrosis lung disease modifier locus

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Estimation of cis-eQTL Effect Sizes Using a Log of Linear Model

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Distant regulatory effects of genetic variation in multiple human tissuesPreprint

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Integrative cross tissue analysis of gene expression identifies novel type 2 diabetes genesPreprint

Torres, J., Barbeira, A., Bonazzola, R., Morris, A. P., Shah, K. P., Wheeler, H. E., Bell, G. I., Cox, N. J., & Im, H. K. (2017) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/108134 · Cited by 13

Long non-coding RNA gene regulation and trait associations across human tissuesPreprint

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A Developmental Gene Expression Atlas Reveals Novel Biological Basis of Complex Phenotypes in Sheep

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Elucidating the patterns of pleiotropy and its biological relevance in maize

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OutSingle: a novel method of detecting and injecting outliers in RNA-Seq count data using the optimal hard threshold for singular values

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Evaluation of noninvasive biospecimens for transcriptome studies

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Partitioning and aggregating cross-tissue and tissue-specific genetic effects to identify gene-trait associations

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Gene expression and splicing QTL analysis of blood cells in African American participants from the Jackson Heart Study

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SR-TWAS: leveraging multiple reference panels to improve transcriptome-wide association study power by ensemble machine learning

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Precision Proteogenomics Reveals Pan-Cancer Impact of Germline Variants

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Human plasma proteomic profile of clonal hematopoiesis

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