Comparative studies of gene expression and the evolution of gene regulation
DOI 10.1038/nrg3229
Cited by (487)
Items 301–400 of 487
- Expectations for the Methodology and Translation of Animal Research: A Survey of the General Public, Medical Students and Animal Researchers in North AmericaAri Robin Joffe, Meredith Bara, Natalie R. Anton, Nathan Nobis · 2016 · Alternatives to Laboratory Animals
- Co-expression clustering across flower development identifies modules for diverse floral forms in Achimenes (Gesneriaceae)Wade R. Roberts, Eric H. Roalson · 2020 · PeerJ
- Dynamics of Dirac concentrations in the evolution of quantitative alleles with sexual reproductionLéonard Dekens, Sepideh Mirrahimi · 2022 · Nonlinearity
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- Medical Systems BiologyElena R Alvarez-Buylla, Juan Carlos Martínez‐García, José Dávila-Velderrain, Elisa Domínguez‐Hüttinger, Mariana Esther Martínez-Sánchez · 2018 · Advances in experimental medicine and biology
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- Capturing Evolutionary Signatures in Transcriptomes with myTAIHajk‐Georg Drost, Alexander Gabel, Tomislav Domazet‐Lošo, Marcel Quint, Ivo Große · 2016 · bioRxiv (Cold Spring Harbor Laboratory)
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- Rapid evolutionary repair by secondary perturbation of a primary disrupted transcriptional networkPo‐Chen Hsu, Yu‐Hsuan Cheng, Chia‐Wei Liao, Richard Ron R. Litan, Yu‐Ting Jhou, Florica Jean Ganaden Opoc, Ahmed A. A. Amine, Jun‐Yi Leu · 2023 · EMBO Reports
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- Fattening the perspective of Hox protein specificity through SLiMmingLucrezia Rinaldi, Andrew J. Saurin, Yacine Graba · 2018 · The International Journal of Developmental Biology
- Approximate distance correlation for selecting highly interrelated genes across datasetsQunlun Shen, Shihua Zhang · 2021 · PLoS Computational Biology
- Evolution: are the monkeys’ typewriters rigged?Michael R. Garvin, Anthony J. Gharrett · 2014 · Royal Society Open Science
- Inferring the genetic architecture of expression variation from replicated high throughput allele-specific expression experimentsXinwen Zhang, J. J. Emerson · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
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- Inferring DNA methylation in non-skeletal tissues of ancient specimensYoav Mathov, Malka Nissim‐Rafinia, Chen Leibson, Nir Galun, Tomàs Marquès‐Bonet, Adam Kandel, Meir Liebergall, Eran Meshorer, Liran Carmel · 2024 · Nature Ecology & Evolution
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- Protein moonlighting by a target gene dominates phenotypic divergence of the Sef1 transcriptional regulatory network in yeastsPo‐Chen Hsu, Tzu‐Chiao Lu, Po-Hsiang Hung, Jun‐Yi Leu · 2024 · Nucleic Acids Research
- Linking individual fitness to the evolution of cognitionMichael J. Sheehan, Sara Miller · 2025 · Philosophical Transactions of the Royal Society B Biological Sciences
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- The evolution of de novo human‐specific microRNA genes on chromosome 21Hunter Johnson, Jessica A. Blandino, Beatriz C. Mercado, José A. Galván, William J. Higgins, Nathan H. Lents · 2022 · American Journal of Biological Anthropology
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- Bank vole genomics links determinate and indeterminate growth of teethZachary T. Calamari, Andrew Song, Emily Cohen, Muspika Akter, Rishi Das Roy, Outi K. Hallikas, Mona M. Christensen, Pengyang Li, Pauline Marangoni, Jukka Jernvall et al. · 2024 · BMC Genomics
- Genome variation and conserved regulation identify genomic regions responsible for strain specific phenotypes in ratDavid Martín‐Gálvez, Denis Dunoyer de Segonzac, Man Chun John Ma, Anne E. Kwitek, David Thybert, Paul Flicek · 2017 · BMC Genomics
- Positive Selection of Transcription Factors Is a Prominent Feature of the Evolution of a Plant Pathogenic Genus Originating in the MioceneMark C. Derbyshire, Lincoln Harper, Francisco J. López-Ruiz · 2021 · Genome Biology and Evolution
- An Introduction and Applications of BioinformaticsHenny Patel, Dhruti Bhatt, Shreya Shakhreliya, Navya Lavina Lam, Rupesh Maurya, Vijai Singh · 2021 · Springer eBooks
- HOMECAT: consensus homologs mapping for interspecific knowledge transfer and functional genomic data integrationSimone Zorzan, Erika Lorenzetto, Michele Ettorre, Valeria Pontelli, Carlo Laudanna, Mario Buffelli · 2013 · Bioinformatics
- Maritime Pine Genomics in FocusLieven Sterck, Nuria de María, Rafael Antonio Cañas, Marina de Miguel, Pedro Perdiguero, Annie Raffin, Katharina B. Budde, Miriam López‐Hinojosa, Francisco R. Cantón, Andreia Rodrigues et al. · 2022 · Compendium of plant genomes
- Pervasive adaptation of gene expression in DrosophilaArmita Nourmohammad, Joachim Rambeau, Torsten Held, Johannes Berg, M. Lässig · 2015 · arXiv (Cornell University)
- Comparative transcriptomics provides insight into the evolution of cold response in PooideaeLars Grønvold, Marian Schubert, Simen R. Sandve, Siri Fjellheim, Torgeir Rhoden Hvidsten · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
- The strength and form of natural selection on transcript abundance in the wildFreed Ahmad, Paul V. Debes, Ilkka Nousiainen, Siim Kahar, Lilian Pukk, Riho Gross, Mikhail Y. Ozerov, Anti Vasemägi · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
- Identification and Elucidation of Expression Quantitative Trait Loci (eQTL) and their regulating mechanisms using Decodive Deep LearningMenno J. Witteveen · 2014 · Research Repository (Delft University of Technology)
- Strength of purifying selection on the amino-acid sequence is associated with the amount of non-additive variance in gene expression.Margarita Takou, Daniel J. Balick, Kim A. Steige, Josselin Clo, Hannes Dittberner, Ulrike Goebel, Holger Schielzeth, Juliette de Meaux · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Multi-Omics Regulatory Network Inference in the Presence of Missing DataJuan Henao, Michael Lauber, Manuel Azevedo, Anastasiia Grekova, Fabian Theis, Markus List, Christoph Ogris, Benjamin Schubert · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Shared neural transcriptomic patterns underlie the repeated evolution of mutualistic cleaning behavior in Labridae wrassesRebecca L. Young, Chelsea A. Weitekamp, Zegni Triki, Yiheng Su, Redouan Bshary, Hans A. Hofmann · 2022
- Quantifying Transcriptome Turnover on Phylogenies by Modeling Gene Expression as a Binary TraitThompson, Ammon, May, Michael R, Hopkins, Ben R, Riedl, Nerisa, Barmina, Olga, Liebeskind, Benjamin J, Zhao, Li, Begun, David, Kopp, Artyom · 2025 · Molecular Biology and Evolution
- Genomic and chromosomal architectures underlying fertility maintenance in the testes of intergeneric homoploid hybridsLi Ren, Yiyan Zeng, Qizhi Liu, Xiaolong Tu, Fayi Chen, Hao Wu, Chuan Wang, Chang Wu, Mengxue Luo, Yakui Tai et al. · 2025 · Science China Life Sciences
- The regulatory architecture of gene expression variation in Caenorhabditis elegans revealed by multi-strain allele-specific analysisAvery Davis Bell, Francisco Valencia, Annalise B. Paaby · 2025 · Genetics
- Predicting Gene Expression Responses to Cold in Arabidopsis thaliana Using Natural Variation in DNA SequenceMargarita Takou, Emily S. Bellis, Jesse R. Lasky · 2025 · Genes
- PcabHLH58/PcabHLH151 regulates adventitious root development and nitrogen uptake in poplarHantian Wei, Xinglu Zhou, Xiaodong Xiang, Jiujun Du, Yongxia Bai, Min Zhang, Xueqin Song, Guanzheng Qu, L Zhang, Jianjun Hu · 2026 · Nature Communications
- Molecular and Developmental Signatures of Genital Size Macro-Evolution in BugsBruno Celso Genevcius, Denis C Calandriello, Tatiana Teixeira Torres · 2022 · Molecular Biology and Evolution
- Divergence in interspecific and intersubspecific gene expression between two closely related horseshoe bats (Rhinolophus)Jun Li, Keping Sun, Wentao Dai, Haixia Leng, Jiang Feng · 2022 · Journal of Mammalogy
- The roles of different gene expression regulators in acoustic variation in the intermediate horseshoe bat revealed by long-read and short-read RNA sequencing dataQianqian Li, Jianyu Wu, Xiuguang Mao · 2023 · Current Zoology
- Gene Expression Divergence in Eugenia uniflora Highlights Adaptation across Contrasting Atlantic Forest EcosystemsAndreia Carina Turchetto‐Zolet, Fabiano Salgueiro, Frank Guzmán, Nicole Moreira Vetö, Nureyev Ferreira Rodrigues, Natalia Balbinott, Márcia M. A. N. Margis-Pinheiro, Rogério Margis · 2024 · Plants
- TranscriptDB: a transcript-centric database to study eukaryotic transcript conservation and evolutionWend Yam Donald Davy Ouedraogo, Aïda Ouangraoua · 2024 · Nucleic Acids Research
- Host-Associated Genetic Differentiation in the Face of Ongoing Gene Flow: Ecological Speciation in a Pathogenic Parasite of Freshwater FishMasoud Nazarizadeh, Milena Nováková, Jakub Vlček, Jan Štefka · 2025 · Molecular Biology and Evolution
- Neural plasticity, heterochrony, and the onto-phylogeny of consciousnessGiuseppe Iurato · 2025 · Biosystems
- Reconstruction and Analysis of the Evolution of Modular Transcriptional Regulatory Programs Using ArboretumSara Knaack, Dawn Anne Thompson, Sushmita Roy · 2015 · Methods in molecular biology
- Extension to Distributed Annotation System: Summary commandCharalambos Chrysostomou, Robert K. Hastings, Anthony J. Brookes · 2014 · IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI ...)
- Gene Duplication Models and Reconstruction of Gene Regulatory Network Evolution from Network StructureJuris Vīksna, David Gilbert · 2016 · Baltic Journal of Modern Computing
- Prospects for sociogenomics in avian cooperative breeding and parental careFlavia Termignoni‐García, Matthew I. M. Louder, Christopher N. Balakrishnan, Lauren A. O’Connell, Scott V. Edwards · 2019 · Current Zoology
- A phylogeographic, ecological and genomic analysis of the recent range expansion of the wasp spider Argiope bruennichiHenrik Krehenwinkel, Diethard Tautz, Guenther B. Hartl · 2013 · Multimedialen Archiv und Publikationsserver der Christian-Albrechts-Universität zu Kiel (Christian-Albrechts-Universität zu Kiel)
- The scales and signatures of climate adaptation by the Arabidopsis transcriptomeJack M. Colicchio, Melis Akman, Benjamin K. Blackman · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
- Bat pluripotent stem cells reveal unique entanglement between host and virusesMarion Déjosez, Arturo Marín, Graham M. Hughes, Ariadna E. Morales, Carlos Godoy-Parejo, Jonathan Gray, Yiren Qin, Arun A. Singh, Hui Xu, Javier Juste B et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Refining the resolution of the yeast genotype-phenotype map using single-cell RNA-sequencingArnaud N’Guessan, Wen Yuan Tong, Hamed Heydari, Alex N. Nguyen Ba · 2024 · eLife
- Network properties constrain natural selection on gene expression in Caenorhabditis elegansTyler R. Inskeep, Simon Cornelis Groen · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Coordinated shifts in gene expression and regulation during mole-rat evolutionMaëlle Daunesse, Eulalie Liorzou, Elise Parey, Diego Villar, Camille Berthelot · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Exploring the role of miR-430 in hybrid fish during embryonic developmentYirui Zhang, Chang Wang, Jiahao Wu, Ting Liu, Han Wu, Zhonghua Peng, Chengxi Liu, Shengwei Wang, Yan Wang, Kaikun Luo et al. · 2025 · Comparative Biochemistry and Physiology Part B Biochemistry and Molecular Biology
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- GPXplore: an intelligent computational framework for precise gene promoter extractionShruti Godara, Samarth Godara, Shbana Begam, Anil Kumar Singh · 2026 · Frontiers in Bioinformatics
- A Web Resource on Skeletal Muscle Transcriptome of PrimatesDaniela Evangelista, Mariano Avino, Kumar Parijat Tripathi, Mario Rosario Guarracino · 2016 · Lecture notes in computer science
- Comparative analysis of testis transcriptomes in laboratory cohorts of recently diverged allopatric Drosophila nasuta nasuta and Drosophila nasuta albomicansStafny Dsouza, Koushik Ponnanna, Nallur Basappa Ramachandra · 2021 · Journal of Asia-Pacific Entomology
- Fixation of Expression Divergences by Natural Selection in Arabidopsis Coding GenesCheng Qi, Qiang Wei, Youn Jin Ye, Jing Liu, Guishuang Li, Jane W. Liang, Haiyan Huang, Guang Wu · 2024 · International Journal of Molecular Sciences
- Lexical fields of predictive and personalized medicine 1)Thierry Mathieu, Laurent Bermont, Jean-Christophe Boyer, Céline Versuyft, Alexandre Evrard, Isabelle Cuvelier, Rémy Couderc, Katell Peoc’h · 2013 · Drug metabolism and drug interactions
- Differential transcriptional regulation by alternatively designed mechanisms: A mathematical modeling approachNecmettin Yıldırım, Mehmet Emin Aktas, Şeyma Nur Özcan, Esra Akbaş, Ahmet Ali Ay · 2016 · In Silico Biology
- ICGEC: a comparative method for measuring epigenetic conservation of genes via the integrated signal from multiple histone modifications between cell typesJing Yan Tang, Zefeng Wu, Yuhan Tian, Ruolin Yang · 2020 · BMC Genomics
- Comment on “Lessons from Toxicology: Developing a 21st-Century Paradigm for Medical Research”Ray Greek · 2016 · Environmental Health Perspectives
- Combining transcriptomic and fitness data reveals additive and mostly adaptive plastic responses of gene expression to multiple stress in Tribolium castaneumEva L. Koch, Frédéric Guillaume · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
- Sequencing-Based Transcriptome-Wide Targeted Genotyping for Evolutionary and Ecological StudiesXuan Zhu, Jing Wang, Jia Lv, Pingping Liu, Lingling Zhang, Wenqian Jiao, Cen Ma, Zhenmin Bao, Shi Wang · 2019 · Evolutionary Bioinformatics
- Persistent chromatin states, pervasive transcription, and shared cis -regulatory sequences have shaped the C. elegans genomeJames M Bellush, Iestyn Whitehouse · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
- Adaptive evolution of carnivory in Nepenthes pitcher plants: a comparative transcriptomics and proteomics perspectiveMathias Scharmann, Faizah Metali, T. Ulmar Grafe, Alex Widmer · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
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- Cell type-specific cis-regulatory divergence in gene expression and chromatin accessibility revealed by human-chimpanzee hybrid cellsBan Wang, Alexander L. Starr, Hunter B. Fraser · 2023 · eLife
- Cell type-specific cis-regulatory divergence in gene expression and chromatin accessibility revealed by human-chimpanzee hybrid cellsBan Wang, Alexander L. Starr, Hunter B. Fraser · 2024 · eLife