The DOI matches its Crossref record; 10 of the 10 references it cites were found in a registry or an index.
Next-generation sequencing data interpretation: enhancing reproducibility and accessibility
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Citations
Cites
Primer-Directed Enzymatic Amplification of DNA with a Thermostable DNA Polymerase
Saiki, R. K., Gelfand, D. H., Stoffel, S., Scharf, S. J., Higuchi, R., Horn, G. T., Mullis, K. B., & Erlich, H. A. (1988) · Science · doi:10.1126/science.2448875 · Cited by 17,719
RNA-Seq: a revolutionary tool for transcriptomics
Wang, Z., Gerstein, M., & Snyder, M. (2009) · Nature Reviews Genetics · doi:10.1038/nrg2484 · Cited by 13,174
Saiki, R. K., Scharf, S., Faloona, F., Mullis, K. B., Horn, G. T., Erlich, H. A., & Arnheim, N. (1985) · Science · doi:10.1126/science.2999980 · Cited by 8,956
A map of human genome variation from population-scale sequencing.
The 1000 Genomes Project Consortium (2010) · Nature · doi:10.1038/nature09534 · Cited by 7,877
The International HapMap Project
†The International HapMap Consortium, Genotyping centres: Baylor College of Medicine and ParAllele BioScience, Gibbs, R. A., Belmont, J. W., Hardenbol, P., Willis, T. D., Yu, F., Chinese HapMap Consortium, Yang, H., Ch'ang, L.-Y., et al. (2003) · Nature · doi:10.1038/nature02168 · Cited by 6,057
Raise standards for preclinical cancer research
Begley, C. G., & Ellis, L. M. (2012) · Nature · doi:10.1038/483531a · Cited by 2,979
Genotype and SNP calling from next-generation sequencing data
Nielsen, R., Paul, J. S., Albrechtsen, A., & Song, Y. S. (2011) · Nature Reviews Genetics · doi:10.1038/nrg2986 · Cited by 1,396
Microarray data analysis: from disarray to consolidation and consensus
Allison, D. B., Cui, X., Page, G. P., & Sabripour, M. (2006) · Nature Reviews Genetics · doi:10.1038/nrg1749 · Cited by 1,339
Personal omics profiling reveals dynamic molecular and medical phenotypes
Chen, R., Mias, G. I., Li-Pook-Than, J., Jiang, L., Lam, H. Y. K., Chen, R., Miriami, E., Karczewski, K. J., Hariharan, M., Dewey, F. E., et al. (2012) · Cell · doi:10.1016/j.cell.2012.02.009 · Cited by 1,291
Repeatability of published microarray gene expression analyses
Ioannidis, J. P. A., Allison, D. B., Ball, C. A., Coulibaly, I., Cui, X., Culhane, A. C., Falchi, M., Furlanello, C., Game, L., Jurman, G., et al. (2009) · Nature Genetics · doi:10.1038/ng.295 · Cited by 551
Cited by
Reproducibility in Science: Improving the Standard for Basic and Preclinical Research
Begley, C. G., & Ioannidis, J. P. A. (2015) · Circulation Research · doi:10.1161/circresaha.114.303819 · Cited by 1,035
Ten Simple Rules for Reproducible Computational Research
Sandve, G. K., Nekrutenko, A., Taylor, J., & Hovig, E. (2013) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1003285 · Cited by 880
Self-citationCloud computing for genomic data analysis and collaboration
Langmead, B., & Nellore, A. (2018) · Nature Reviews Genetics · doi:10.1038/nrg.2017.113 · Cited by 310
“This is crucial in a field that has seen reproducibility failures 38–40 and where many are calling for more rigorous accounting of factors, such as underlying software versions, that directly or indirectly affect computational analyses 41,42 .”
BackgroundA checklist for maximizing reproducibility of ecological niche models
Feng, X., Park, D. S., Walker, C., Peterson, A. T., Merow, C., & Papeş, M. (2019) · Nature Ecology & Evolution · doi:10.1038/s41559-019-0972-5 · Cited by 323
Allali, I., Arnold, J. W., Roach, J., Cadenas, M. B., Butz, N., Hassan, H. M., Koci, M., Ballou, A., Mendoza, M., Ali, R., et al. (2017) · BMC Microbiology · doi:10.1186/s12866-017-1101-8 · Cited by 298
Metadata
- Authors
- Nekrutenko, A., & Taylor, J.
- Venue
- Nature Reviews Genetics
- Published
- 2012-08-17
- Volume
- 13
- Issue
- 9
- Pages
- 667-672
- ISSN
- 1471-0056 (ISSN-L)
- 1471-0064
- OpenAlex
- W1968659469
- Cited by
- 318
- References
- 10
- FWCI
- 12.83
- Type
- journal article
- Language
- en
- Open access
- closed
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Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
