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From neural development to cognition: unexpected roles for chromatin
Open accessAbstract
Recent genome-sequencing studies in human neurodevelopmental and psychiatric disorders have uncovered mutations in many chromatin regulators. These human genetic studies, along with studies in model organisms, are providing insight into chromatin regulatory mechanisms in neural development and how alterations to these mechanisms can cause cognitive deficits, such as intellectual disability. We discuss several implicated chromatin regulators, including BAF (also known as SWI/SNF) and CHD8 chromatin remodellers, HDAC4 and the Polycomb component EZH2. Interestingly, mutations in EZH2 and certain BAF complex components have roles in both neurodevelopmental disorders and cancer, and overlapping point mutations are suggesting functionally important residues and domains. We speculate on the contribution of these similar mutations to disparate disorders.
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“By comparing these genes with genes that cause intellectual disability, this study identified molecular processes that are preferentially disrupted by ASD risk genes, including transcriptional regulation, chromatin regulation and synaptic development, and it identified disruption of specific pathways, such as BAF (SWI/ SNF) complex-mediated neuronal development 30,110,111.”
From Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders (2015) · cites this paper as [110]
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“These ATP-dependent chromatin remodelling complexes consist of 15 subunits, including one of both ATPase core subunits SMARCA4 or SMARCA237.”
From A SWI/SNF-related autism syndrome caused by de novo mutations in ADNP (2014) · cites this paper as [37]
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Cites
An integrated encyclopedia of DNA elements in the human genome
The ENCODE Project Consortium (2012) · Nature · doi:10.1038/nature11247 · Cited by 18,072
Jenuwein, T., & Allis, C. D. (2001) · Science · doi:10.1126/science.1063127 · Cited by 9,756
Shrestha, S., & Offer, S. M. (2016) · Medical Epigenetics · doi:10.1159/000444713 · Cited by 8,951
Functions of DNA methylation: islands, start sites, gene bodies and beyond
Jones, P. A. (2012) · Nature Reviews Genetics · doi:10.1038/nrg3230 · Cited by 6,061
Chen, X., Xiu, M., Xing, J., Yu, S., Min, D., & Guo, F. (2017) · Cellular Physiology and Biochemistry · doi:10.1159/000479439 · Cited by 5,760
Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2
Amir, R. E., Van den Veyver, I. B., Wan, M., Tran, C. Q., Francke, U., & Zoghbi, H. Y. (1999) · Nature Genetics · doi:10.1038/13810 · Cited by 4,990
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
Mikkelsen, T. S., Ku, M., Jaffe, D. B., Issac, B., Lieberman, E., Giannoukos, G., Alvarez, P., Brockman, W., Kim, T.-K., Koche, R. P., et al. (2007) · Nature · doi:10.1038/nature06008 · Cited by 4,129
Histone demethylation mediated by the nuclear amine oxidase homolog LSD1
Shi, Y., Lan, F., Matson, C., Mulligan, P., Whetstine, J. R., Cole, P. A., Casero, R. A., & Shi, Y. (2004) · Cell · doi:10.1016/j.cell.2004.12.012 · Cited by 4,051
Epigenetics in human disease and prospects for epigenetic therapy
Egger, G., Liang, G., Aparicio, A., & Jones, P. A. (2004) · Nature · doi:10.1038/nature02625 · Cited by 3,232
Polycomb complexes repress developmental regulators in murine embryonic stem cells
Boyer, L. A., Plath, K., Zeitlinger, J., Brambrink, T., Medeiros, L. A., Lee, T. I., Levine, S. S., Wernig, M., Tajonar, A., Ray, M. K., et al. (2006) · Nature · doi:10.1038/nature04733 · Cited by 2,568
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- Allis, C. D., Jenuwein, T. & Reinberg, D. Epigenetics (Cold Spring Harbor Laboratory Press, 2007).
- Kadoch, C., Hargreaves, D. Hodges, C. & Crabtree, G. R. Nature Genet. (in the press).
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Sorted by citations
Items 101–200 of 544
The transcriptional regulatorADNPlinks the BAF (SWI/SNF) complexes with autism
Vandeweyer, G., Helsmoortel, C., Dijck, A. V., Silfhout, A. T. V., Coe, B. P., Bernier, R., Gerdts, J. A., Rooms, L., van den Ende, J., Bakshi, M., et al. (2014) · American Journal of Medical Genetics Part C Seminars in Medical Genetics · doi:10.1002/ajmg.c.31413 · Cited by 81
Brief Report: SETD2 Mutation in a Child with Autism, Intellectual Disabilities and Epilepsy
Lumish, H. S., Wynn, J., Devinsky, O., & Chung, W. K. (2015) · Journal of Autism and Developmental Disorders · doi:10.1007/s10803-015-2484-8 · Cited by 82
Chromatin plasticity predetermines neuronal eligibility for memory trace formation
Santoni, G., Astori, S., Leleu, M., Glauser, L., Zamora, S. A., Schioppa, M., Tarulli, I., Sandi, C., & Gräff, J. (2024) · Science · doi:10.1126/science.adg9982 · Cited by 81
Porter, R. S., Jaamour, F., & Iwase, S. (2017) · Molecular and Cellular Neuroscience · doi:10.1016/j.mcn.2017.10.006 · Cited by 82
Chromatin-Remodeling-Factor ARID1B Represses Wnt/β-Catenin Signaling
Vasileiou, G., Ekici, A. B., Uebe, S., Zweier, C., Hoyer, J., Engels, H., Behrens, J., Reis, A., & Hadjihannas, M. V. (2015) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2015.08.002 · Cited by 81
Mills, A. A. (2017) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a026450 · Cited by 83
Jin, M., Cao, W., Chen, B., Xiong, M., & Cao, G. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.808859 · Cited by 88
Context-specific functions of chromatin remodellers in development and disease
Gourisankar, S. P., Krokhotin, A., Wenderski, W., & Crabtree, G. R. (2023) · Nature Reviews Genetics · doi:10.1038/s41576-023-00666-x · Cited by 88
Self-citationInvited Review: Epigenetics in neurodevelopment
Salinas, R. D., Connolly, D. R., & Song, H. (2020) · Neuropathology and Applied Neurobiology · doi:10.1111/nan.12608 · Cited by 90
Composition and Function of Mutant Swi/Snf Complexes
Dutta, A., Sardiu, M. E., Gogol, M., Gilmore, J. M., Zhang, D., Florens, L. A., Abmayr, S. M., Washburn, M. P., & Workman, J. L. (2017) · Cell Reports · doi:10.1016/j.celrep.2017.01.058 · Cited by 76
Landscape of mSWI/SNF chromatin remodeling complex perturbations in neurodevelopmental disorders
Valencia, A. M., Sankar, A., van der Sluijs, P. J., Satterstrom, F. K., Fu, J. M., Talkowski, M. E., Vergano, S. A. S., Santen, G. W. E., & Kadoch, C. (2023) · Nature Genetics · doi:10.1038/s41588-023-01451-6 · Cited by 81
The Histone Modifications of Neuronal Plasticity
Geng, H., Chen, H., Wang, H., & Wang, L. (2021) · Neural Plasticity · doi:10.1155/2021/6690523 · Cited by 73
Integrating Early Life Experience, Gene Expression, Brain Development, and Emergent Phenotypes
Weaver, I. C. G. (2014) · Advances in genetics · doi:10.1016/b978-0-12-800222-3.00011-5 · Cited by 74
Wei, H., Liang, F., Meng, G., Nie, Z., Zhou, R., Cheng, W., Wu, X., Feng, Y., & Wang, Y. (2016) · Scientific Reports · doi:10.1038/srep33402 · Cited by 70
Single substitution in H3.3G34 alters DNMT3A recruitment to cause progressive neurodegeneration
Khazaei, S., Chen, C. C. L., Andrade, A. F., Kabir, N., Azarafshar, P., Morcos, S. M., França, J. A., Lopes, M. D. C., Lund, P. J., Danieau, G., et al. (2023) · Cell · doi:10.1016/j.cell.2023.02.023 · Cited by 71
Chen, K., Wang, H., Ilyas, I., Mahmood, A., & Hou, L. (2023) · Brain Sciences · doi:10.3390/brainsci13040634 · Cited by 82
The roles and regulation of Polycomb complexes in neural development
Corley, M., & Kroll, K. L. (2014) · Cell and Tissue Research · doi:10.1007/s00441-014-2011-9 · Cited by 76
Bachmann, C., Nguyen, H., Rosenbusch, J., Pham, L., Rabe, T., Patwa, M., Sokpor, G., Seong, R. H., Ashery‐Padan, R., Mansouri, A., et al. (2016) · PLoS Genetics · doi:10.1371/journal.pgen.1006274 · Cited by 70
Piazzesi, A., Papić, D., Bertan, F., Salomoni, P., Nicotera, P., & Bano, D. (2016) · Cell Reports · doi:10.1016/j.celrep.2016.09.074 · Cited by 68
Yin, J., & Schaaf, C. P. (2016) · Prenatal Diagnosis · doi:10.1002/pd.4942 · Cited by 78
Bcl11 Transcription Factors Regulate Cortical Development and Function
Simon, R., Wiegreffe, C., & Britsch, S. (2020) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2020.00051 · Cited by 66
The chromatin remodeling factor CHD7 controls cerebellar development by regulating reelin expression
Whittaker, D., Riegman, K. L. H., Kasah, S., Mohan, C., Yu, T. Y., Pijuan-Sala, B., Hebaishi, H., Caruso, A., Marques, A. C., Michetti, C., et al. (2017) · Journal of Clinical Investigation · doi:10.1172/jci83408 · Cited by 66
Ypsilanti, A. R., & Rubenstein, J. L. R. (2015) · The Journal of Comparative Neurology · doi:10.1002/cne.23866 · Cited by 64
Zhang, Y., Chen, S.-R., Laumet, G. O., Chen, H., & Pan, H. (2016) · Journal of Biological Chemistry · doi:10.1074/jbc.m115.711812 · Cited by 66
Weaver, I. C. G., Korgan, A. C., Lee, K., Wheeler, R. V., Hundert, A. S., & Goguen, D. (2017) · Frontiers in Behavioral Neuroscience · doi:10.3389/fnbeh.2017.00041 · Cited by 69
De novo Mutations (DNMs) in Autism Spectrum Disorder (ASD): Pathway and Network Analysis
Alonso-González, A., Rodriguez‐Fontenla, C., & Carracedo, Á. (2018) · Frontiers in Genetics · doi:10.3389/fgene.2018.00406 · Cited by 73
Rahman, M. R., Petralia, M. C., Ciurleo, R., Bramanti, A., Fagone, P., Shahjaman, M., Wu, L., Sun, Y., Turanlı, B., Arğa, K. Y., et al. (2020) · Brain Sciences · doi:10.3390/brainsci10100747 · Cited by 62
The phenomenal epigenome in neurodevelopmental disorders
Ciptasari, U., & van Bokhoven, H. (2020) · Human Molecular Genetics · doi:10.1093/hmg/ddaa175 · Cited by 60
Sentinels of chromatin: chromodomain helicase DNA-binding proteins in development and diseasePreprint
Alendar, A., & Berns, A. J. M. (2021) · Genes & Development · doi:10.1101/gad.348897.121 · Cited by 69
Genetic pathways involved in human speech disorders
den Hoed, J., & Fisher, S. E. (2020) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2020.05.012 · Cited by 62
Deficiency of the Chromatin Regulator Brpf1 Causes Abnormal Brain Development
You, L., Zou, J., Hong, Z., Bertos, N., Park, M., Wang, E., & Yang, X. (2015) · Journal of Biological Chemistry · doi:10.1074/jbc.m114.635250 · Cited by 64
Labonne, J. D. J., Lee, K.-H., Iwase, S., Kong, I.-K., Diamond, M. P., Layman, L. C., Kim, C.-H., & Kim, H.-G. (2016) · Human Genetics · doi:10.1007/s00439-016-1668-4 · Cited by 61
Histone Lysine Methylation and Neurodevelopmental Disorders
Kim, J., Lee, J., Lee, I., Lee, S. B., & Cho, K. S. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18071404 · Cited by 65
Forsyth, J. K., Nachun, D. C., Gandal, M. J., Geschwind, D. H., Anderson, A., Coppola, G., & Bearden, C. E. (2019) · Biological Psychiatry · doi:10.1016/j.biopsych.2019.06.029 · Cited by 62
Dual ARID1A/ARID1B loss leads to rapid carcinogenesis and disruptive redistribution of BAF complexes
Wang, Z., Chen, K., Jia, Y., Chuang, J.-C., Sun, X., Lin, Y.-H., Celen, C., Li, L., Huang, F., Liu, X., et al. (2020) · Nature Cancer · doi:10.1038/s43018-020-00109-0 · Cited by 60
Ciolfi, A., Aref‐Eshghi, E., Pizzi, S., Pedace, L., Miele, E., Kerkhof, J., Flex, E., Martinelli, S., Radio, F. C., Ruivenkamp, C. A. L., et al. (2020) · Clinical Epigenetics · doi:10.1186/s13148-019-0804-0 · Cited by 59
The Role of Epigenetics in Congenital Heart Disease
Lim, T. B., Foo, S. Y. R., & Chen, C. K. (2021) · Genes · doi:10.3390/genes12030390 · Cited by 62
Molecular mechanism of sphingosine-1-phosphate action in Duchenne muscular dystrophy
Nguyen-Tran, D.-H., Hait, N. C., Sperber, H., Qi, J., Fischer, K., Ieronimakis, N., Pantoja, M., Hays, A., Allegood, J., Reyes, M., et al. (2013) · Disease Models & Mechanisms · doi:10.1242/dmm.013631 · Cited by 58
van Eyk, C. L., Fahey, M. C., & Gécz, J. (2023) · Nature Reviews Neurology · doi:10.1038/s41582-023-00847-6 · Cited by 58
Mechanisms regulating GABAergic neuron development
Achim, K., Salminen, M., & Partanen, J. M. (2013) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-013-1501-3 · Cited by 56
Tuoc, T., Dere, E., Radyushkin, K., Pham, L., Nguyen, H., Tonchev, A. B., Sun, G., Ronnenberg, A., Shi, Y., Staiger, J. F., et al. (2016) · Molecular Neurobiology · doi:10.1007/s12035-016-9948-5 · Cited by 53
AUTS2 isoforms control neuronal differentiation
Monderer‐Rothkoff, G., Tal, N., Risman, M., Shani, O., Nissim‐Rafinia, M., Malki-Feldman, L., Medvedeva, V. P., Groszer, M., Meshorer, E., & Shifman, S. (2019) · Molecular Psychiatry · doi:10.1038/s41380-019-0409-1 · Cited by 57
Neurobiology of ARID1B haploinsufficiency related to neurodevelopmental and psychiatric disorders
Moffat, J. J., Smith, A. L., Jung, E., Ka, M., & Kim, W.-Y. (2021) · Molecular Psychiatry · doi:10.1038/s41380-021-01060-x · Cited by 53
Small molecule modulators of chromatin remodeling: from neurodevelopment to neurodegeneration
Jiang, D., Li, T., Guo, C., Tang, T.-S., & Liu, H. (2023) · Cell & Bioscience · doi:10.1186/s13578-023-00953-4 · Cited by 54
Benevento, M., van de Molengraft, M., van Westen, R., van Bokhoven, H., & Kasri, N. N. (2015) · Neurobiology of Learning and Memory · doi:10.1016/j.nlm.2015.06.013 · Cited by 53
SWI/SNF chromatin-remodeling complexes in cardiovascular development and disease
Bevilacqua, A., Willis, M. S., & Bultman, S. J. (2013) · Cardiovascular Pathology · doi:10.1016/j.carpath.2013.09.003 · Cited by 54
Verreet, T., Verslegers, M., Quintens, R., Baatout, S., & Benotmane, M. A. (2016) · Neural Plasticity · doi:10.1155/2016/1243527 · Cited by 58
Wu, Y., Hou, F., Wang, X., Kong, Q., Han, X., & Bai, B. (2016) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2016.00114 · Cited by 52
Du, X., Gao, X., Liu, X., Shen, L., Wang, K., Fan, Y., Sun, Y., Luo, X., Liu, H., Wang, L., et al. (2018) · Frontiers in Genetics · doi:10.3389/fgene.2018.00594 · Cited by 57
Li, J., Ma, Z., Shi, M., Malty, R. H., Aoki, H., Minić, Z., Phanse, S., Jin, K., Wall, D. P., Zhang, Z., et al. (2015) · Cell Systems · doi:10.1016/j.cels.2015.11.002 · Cited by 52
Ehrenhöfer-Wölfer, K., Puchner, T., Schwarz, C., Rippka, J., Blaha-Ostermann, S., Strobl, U., Hörmann, A., Bader, G., Kornigg, S., Zahn, S. K., et al. (2019) · Scientific Reports · doi:10.1038/s41598-019-48152-x · Cited by 51
Prognosis related miRNAs, DNA methylation, and epigenetic interactions in lung adenocarcinoma
Liu, H., & Zhao, H. (2019) · Neoplasma · doi:10.4149/neo_2018_181029n805 · Cited by 50
Tocco, C., Bertacchi, M., & Studer, M. (2021) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2021.767965 · Cited by 53
Epigenetic mechanisms in epilepsy
Kobow, K., & Blümcke, I. (2014) · Progress in brain research · doi:10.1016/b978-0-444-63326-2.00014-4 · Cited by 57
Nussinov, R., Yavuz, B. R., Arici, M. K., Demirel, H. C., Zhang, M., Liu, Y., Tsai, C., Jang, H., & Tunçbağ, N. (2023) · Biophysical Reviews · doi:10.1007/s12551-023-01054-9 · Cited by 47
Epigenetic Mechanisms in Autism Spectrum Disorder
Zhubi, A., Cook, E. H., Guidotti, A., & Grayson, D. R. (2014) · International review of neurobiology · doi:10.1016/b978-0-12-801311-3.00006-8 · Cited by 56
MCPH1: a window into brain development and evolution
Pulvers, J. N. (2015) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2015.00092 · Cited by 49
Roles of chromatin remodeling BAF complex in neural differentiation and reprogramming
Narayanan, R., & Tuoc, T. (2014) · Cell and Tissue Research · doi:10.1007/s00441-013-1791-7 · Cited by 49
SWI/SNF complexes are required for full activation of the DNA-damage response
Smith‐Roe, S. L., Nakamura, J., Holley, D., Chastain, P. D., Rosson, G. B., Simpson, D. A., Ridpath, J. R., Kaufman, D. G., Kaufmann, W. K., & Bultman, S. J. (2015) · Oncotarget · doi:10.18632/oncotarget.2715 · Cited by 51
HDAC4 in ischemic stroke: mechanisms and therapeutic potential
Kong, Q., Hao, Y., Li, X., Wang, X., Ji, B., & Wu, Y. (2018) · Clinical Epigenetics · doi:10.1186/s13148-018-0549-1 · Cited by 47
An integer programming framework for inferring disease complexes from network data
Mazza, A., Klockmeier, K., Wanker, E. E., & Sharan, R. (2016) · Bioinformatics · doi:10.1093/bioinformatics/btw263 · Cited by 46
BAF chromatin remodeling complex: Cortical size regulation and beyond
Tuoc, T., Narayanan, R., & Stoykova, A. (2013) · Cell Cycle · doi:10.4161/cc.25999 · Cited by 45
Hi-C Chromatin Interaction Networks Predict Co-expression in the Mouse Cortex
Babaei, S., Mahfouz, A. E., Hulsman, M., Lelieveldt, B. P. F., de Ridder, J., & Reinders, M. J. T. (2015) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1004221 · Cited by 45
Azad, G. K., Ito, K., Sailaja, B. S., Biran, A., Nissim‐Rafinia, M., Yamada, Y., Brown, D. T., Takizawa, T., & Meshorer, E. (2017) · The Journal of Cell Biology · doi:10.1083/jcb.201703141 · Cited by 45
Study, D., Basilicata, M. F., Bruel, A., Semplicio, G., Valsecchi, C. I. K., Aktaş, T., Duffourd, Y., Rumpf, T., Morton, J., Bache, I., et al. (2018) · Nature Genetics · doi:10.1038/s41588-018-0220-y · Cited by 46
Li, W., & Mills, A. A. (2014) · Epigenomics · doi:10.2217/epi.14.31 · Cited by 46
BRPF1 is essential for development of fetal hematopoietic stem cells
You, L., Li, L., Zou, J., Yan, K., Belle, J. I., Nijnik, A., Wang, E., & Yang, X. (2016) · Journal of Clinical Investigation · doi:10.1172/jci80711 · Cited by 46
Regulatory genes and pathways disrupted in autism spectrum disorders
Ayhan, F., & Konopka, G. (2018) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2018.08.017 · Cited by 46
Nixon, K. C. J., Rousseau, J., Stone, M. H., Sarikahya, M. H., Ehresmann, S., Mizuno, S., Matsumoto, N., Miyake, N., Baralle, D., McKee, S. A., et al. (2019) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2019.02.001 · Cited by 47
Banfi, F., Rubio, A., Zaghi, M., Massimino, L., Fagnocchi, G., Bellini, E. N., Luoni, M., Cancellieri, C., Bagliani, A., Resta, C. D., et al. (2021) · Nature Communications · doi:10.1038/s41467-021-24391-3 · Cited by 41
Kaplanis, J., Samocha, K. E., Wiel, L., Zhang, Z., Arvai, K. J., Eberhardt, R. Y., Gallone, G., Lelieveld, S. H., Martin, H. C., McRae, J. F., et al. (2019) · doi:10.1101/797787 · Cited by 36
Verreet, T., Quintens, R., Dam, D. V., Verslegers, M., Tanori, M., Casciati, A., Neefs, M., Leysen, L., Michaux, A., Janssen, A., et al. (2015) · Journal of Neurodevelopmental Disorders · doi:10.1186/1866-1955-7-3 · Cited by 47
Liu, J., Liu, S., Gao, H., Han, L., Chu, X., Sheng, Y., Wang, Y., Shou, W., Liu, Y., Wan, J., et al. (2020) · Genome biology · doi:10.1186/s13059-020-02082-4 · Cited by 39
Beck, D. B., Basar, M. A., Asmar, A. J., Thompson, J. J., Oda, H., Uehara, D. T., Saida, K., Pajusalu, S., Talvik, I., D’Souza, P., et al. (2021) · Science Advances · doi:10.1126/sciadv.abe2116 · Cited by 43
Ghosh, K. K., Zhang, G.-F., Chen, H., Chen, S., & Pan, H. (2022) · Journal of Biological Chemistry · doi:10.1016/j.jbc.2022.101999 · Cited by 43
Cosentino, M. S., Oses, C., Echegaray, C. V., Solari, C., Waisman, A., Álvarez, Y. D., Petrone, M. V., Francia, M. G., Schultz, M., Sevlever, G. E., et al. (2019) · Journal of Molecular Biology · doi:10.1016/j.jmb.2019.02.012 · Cited by 44
Epigenetics in neuronal regeneration
VandenBosch, L. S., & Reh, T. A. (2019) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2019.04.001 · Cited by 42
Chromatin remodeler CHD7 regulates the stem cell identity of human neural progenitorsPreprint
MuhChyi, C., Sanosaka, T., Okuno, H., Zhou, Z., Koya, I., Banno, S., Andoh-Noda, T., Tabata, Y., Shimamura, R., Hayashi, T., et al. (2018) · Genes & Development · doi:10.1101/gad.301887.117 · Cited by 43
Mari, F., Marozza, A., Mencarelli, M. A., Rizzo, C. L., Fallerini, C., Dosa, L., Marco, C. D., Carignani, G., Baldassarri, M., Cianci, P., et al. (2014) · Brain and Development · doi:10.1016/j.braindev.2014.08.009 · Cited by 41
Mechanistic Insights Into MicroRNA-Induced Neuronal Reprogramming of Human Adult Fibroblasts
Lu, Y.-L., & Yoo, A. S. J. (2018) · Frontiers in Neuroscience · doi:10.3389/fnins.2018.00522 · Cited by 41
Hu, B., Lin, J., Yang, X., & Sang, X. (2020) · Cell Proliferation · doi:10.1111/cpr.12791 · Cited by 40
Increased ACTL6A Occupancy within mSWI/SNF Chromatin Remodelers Drives Human Squamous Cell Carcinoma
Chang, C.-Y., Shipony, Z., Lin, S. G., Kuo, A., Xiong, X., Loh, K. M., Greenleaf, W. J., & Crabtree, G. R. (2021) · Molecular Cell · doi:10.1016/j.molcel.2021.10.005 · Cited by 44
Self-citationZug, R. (2022) · Biology Open · doi:10.1242/bio.058896 · Cited by 45
Nguyen, H., Sokpor, G., Pham, L., Rosenbusch, J., Stoykova, A., Staiger, J. F., & Tuoc, T. (2016) · Cell Cycle · doi:10.1080/15384101.2016.1160984 · Cited by 41
Severino, M., Accogli, A., Gimelli, G., Rossi, A., Kotzeva, S., Rocco, M. D., Ronchetto, P., Cuoco, C., & Tassano, E. (2015) · Molecular Cytogenetics · doi:10.1186/s13039-015-0121-z · Cited by 39
Marsili, N. (2018) · Oxford University Press eBooks · doi:10.1093/oxfordhb/9780198736578.013.12 · Cited by 39
Deep Genetic Connection Between Cancer and Developmental Disorders
Qi, H., Dong, C., Chung, W. K., Wang, K., & Shen, Y. (2016) · Human Mutation · doi:10.1002/humu.23040 · Cited by 40
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Mathies, L. D., Blackwell, G. G., Austin, M. K., Edwards, A. C., Riley, B. P., Davies, A. G., & Bettinger, J. C. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1413451112 · Cited by 37
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Nazim, M., Lin, C.-H., Feng, A., Xiao, W., Yeom, K., Li, M., Daly, A. E., Tan, X., Vu, H., Ernst, J., et al. (2024) · Cell stem cell · doi:10.1016/j.stem.2024.04.001 · Cited by 36
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Metadata
- Authors
- Ronan, J. L., Wu, W., & Crabtree, G. R.
- Affiliations
- Stanford University (US)
- Corresponding author
- Crabtree, Gerald R.
- Venue
- Nature Reviews Genetics
- Published
- 2013-04-09
- Volume
- 14
- Issue
- 5
- Pages
- 347-359
- ISSN
- 1471-0056 (ISSN-L)
- 1471-0064
- PMC
- PMC4010428
- OpenAlex
- W2060429763
- Cited by
- 544
- References
- 130
- Citations by year
- 2026: 18 · 2025: 18 · 2024: 22 · 2023: 31 · 2022: 25 · 2021: 36 · 2020: 48 · 2019: 42 · 2018: 90 · 2017: 44 · 2016: 43 · 2015: 47 · 2014: 58 · 2013: 21
- FWCI
- 6.93
- Type
- journal article
- Language
- en
- Update notices
- erratum (2013-05-09)
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Nature Reviews Genetics (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Howard Hughes Medical Institute
- California Institute for Regenerative Medicine
- California Institute of Regenerative Medicine
- National Institutes of Health
- National Cancer Institute (CA163915, R01CA163915)
- National Institute of Neurological Disorders and Stroke (NS046789, R01NS046789, R37NS046789)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Chromatin Remodeling and Cancer
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Keywords
- chromatin regulation, neural development, neurodevelopmental disorders, mental illness, chromatin remodellers, histone-modifying enzymes, SWI/SNF complex, CHD8, HDAC4, EZH2, Polycomb, intellectual disability, cognitive impairment, cancer mutations
- MeSH terms
- Enhancer of Zeste Homolog 2 Protein, Animals, Chromatin, Cognition, DNA-Binding Proteins, Histone Deacetylases, Humans, Intellectual Disability, Mutation, Neurons, Nuclear Proteins, Repressor Proteins, Transcription Factors, Chromatin Assembly and Disassembly, Neurogenesis, Polycomb Repressive Complex 2
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