Signal integration in the control of shoot branching
Abstract
Shoot branching is a highly plastic developmental process in which axillary buds are formed in the axil of each leaf and may subsequently be activated to give branches. Three classes of plant hormones, auxins, cytokinins and strigolactones (or strigolactone derivatives) are central to the control of bud activation. These hormones move throughout the plant forming a network of systemic signals. The past decade brought great progress in understanding the mechanisms of shoot branching control. Biological and computational studies have led to the proposal of two models, the auxin transport canalization-based model and the second messenger model, which provide mechanistic explanations for apical dominance.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Auxin maintains RMS1 transcript levels, and hence SL synthesis, and down-regulates CK levels.
“Auxin maintains RMS1 transcript levels, and hence SL synthesis, and down-regulates CK levels.”
From The Pea TCP Transcription Factor PsBRC1 Acts Downstream of Strigolactones to Control Shoot Branching (2012) · cites this paper as Domagalska and Leyser, 2011
SLs reduce PIN accumulation to the plasma membrane via RMS4 but independently of PsBRC1.
“SLs reduce PIN accumulation to the plasma membrane via RMS4 but independently of PsBRC1 and, by reducing the effectiveness of the canalization feedback loop, enhance the competition between active buds.”
From The Pea TCP Transcription Factor PsBRC1 Acts Downstream of Strigolactones to Control Shoot Branching (2012) · cites this paper as Domagalska and Leyser, 2011
SLs, by reducing the effectiveness of the canalization feedback loop, enhance the competition between active buds.
“SLs reduce PIN accumulation to the plasma membrane via RMS4 but independently of PsBRC1 and, by reducing the effectiveness of the canalization feedback loop, enhance the competition between active buds.”
From The Pea TCP Transcription Factor PsBRC1 Acts Downstream of Strigolactones to Control Shoot Branching (2012) · cites this paper as Domagalska and Leyser, 2011
The model that best fits the data would be one in which both regulatory systems coexist.
“The model that best fits with our data would be one in which both regulatory systems, not mutually exclusive, as indicated previously (Domagalska and Leyser, 2011), would coexist (Fig. 6).”
From The Pea TCP Transcription Factor PsBRC1 Acts Downstream of Strigolactones to Control Shoot Branching (2012) · cites this paper as Domagalska and Leyser, 2011
Two models are currently proposed to explain how auxin and SLs interact to control branching: the auxin transport canalization model and the second messenger model.
“Two models are currently proposed to explain how auxin and SLs interact to control branching: the auxin transport canalization model and the second messenger model (Brewer et al., 2009;Domagalska and Leyser, 2011).”
From The Pea TCP Transcription Factor PsBRC1 Acts Downstream of Strigolactones to Control Shoot Branching (2012) · cites this paper as Domagalska and Leyser, 2011
The auxin canalization hypothesis suggests a feed forward mechanism to explain the establishment of polar auxin transport routes that induce the development of vascular tissues.
“The auxin canalization hypothesis (reviewed in Domagalska and Leyser, 2011) suggests a feed forward mechanism to explain the establishment of polar auxin transport routes that induce the development of vascular tissues.”
From Shaping plant architecture (2015) · cites this paper as Domagalska and Leyser, 2011
Cites
<i>MAX1</i> and <i>MAX2</i> control shoot lateral branching in <i>Arabidopsis</i>
Stirnberg, P., van de Sande, K., & Leyser, H. M. O. (2002) · Development · doi:10.1242/dev.129.5.1131 · Cited by 692 · see citing works
Sites and homeostatic control of auxin biosynthesis in <i>Arabidopsis</i> during vegetative growth
Ljung, K., Bhalerao, R. P., & Sandberg, G. (2001) · The Plant Journal · doi:10.1046/j.1365-313x.2001.01173.x · Cited by 653 · see citing works
Sorefan, K., Booker, J., Haurogné, K., Goussot, M., Bainbridge, K., Foo, E., Chatfield, S., Ward, S., Beveridge, C., Rameau, C., et al. (2003) · Genes & Development · doi:10.1101/gad.256603 · Cited by 604 · see citing works
Self-citationCanalization of auxin flow by Aux/IAA-ARF-dependent feedback regulation of PIN polarity
Sauer, M., Balla, J., Luschnig, C., Wiśniewska, J., Reinöhl, V., Friml, J., & Benková, E. (2006) · Genes & Development · doi:10.1101/gad.390806 · Cited by 453 · see citing works
Strigolactone Acts Downstream of Auxin to Regulate Bud Outgrowth in Pea and Arabidopsis
Brewer, P. B., Dun, E. A., Ferguson, B. J., Rameau, C., & Beveridge, C. A. (2009) · PLANT PHYSIOLOGY · doi:10.1104/pp.108.134783 · Cited by 418 · cited 1× · see citing works
“In pea there are conflicting data, with some experiments showing a strigolactone-mediated effect and others showing no effec”
BackgroundAuxin-cytokinin interactions in the control of shoot branching
Shimizu-Sato, S., Tanaka, M., & Mori, H. (2009) · Plant Molecular Biology · doi:10.1007/s11103-008-9416-3 · Cited by 387 · see citing works
Strigolactones enhance competition between shoot branches by dampening auxin transport
Crawford, S., Shinohara, N., Sieberer, T., Williamson, L., George, G., Hepworth, J., Müller, D., Domagalska, M. A., & Leyser, O. (2010) · Development · doi:10.1242/dev.051987 · Cited by 384 · see citing works
Self-citationPhytochrome regulation of branching in Arabidopsis
Finlayson, S. A., Krishnareddy, S. R., Kebrom, T. H., & Casal, J. J. (2010) · Plant Physiology · doi:10.1104/pp.109.148833 · Cited by 240 · see citing works
Morris, S. E., Turnbull, C. G. N., Murfet, I. C., & Beveridge, C. A. (2001) · Plant Physiology · doi:10.1104/pp.126.3.1205 · Cited by 208 · see citing works
Beveridge, C. A., Symons, G. M., & Turnbull, C. G. N. (2000) · Plant Physiology · doi:10.1104/pp.123.2.689 · Cited by 162 · see citing works
Li, C., & Bangerth, F. (1999) · Physiologia Plantarum · doi:10.1034/j.1399-3054.1999.106409.x · Cited by 130 · see citing works
Turnbull, C. G. N., Raymond, M. A. A., Dodd, I. C., & Morris, S. E. (1997) · Planta · doi:10.1007/s004250050128 · Cited by 116 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Sugar demand, not auxin, is the initial regulator of apical dominance
Mason, M. G., Ross, J. J., Babst, B. A., Wienclaw, B. N., & Beveridge, C. A. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1322045111 · Cited by 565 · see citing works
The Pea TCP Transcription Factor PsBRC1 Acts Downstream of Strigolactones to Control Shoot Branching
Braun, N., de Saint Germain, A., Pillot, J.-P., Boutet-Mercey, S., Dalmais, M., Antoniadi, I., Li, X., Maia-Grondard, A., Le Signor, C., Bouteiller, N., et al. (2012) · PLANT PHYSIOLOGY · doi:10.1104/pp.111.182725 · Cited by 486 · see citing works
Multiple pathways regulate shoot branching
Rameau, C., Bertheloot, J., Leduc, N., Andrieu, B., Foucher, F., & Sakr, S. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2014.00741 · Cited by 357 · see citing works
Wang, Y., Sun, S., Zhu, W., Jia, K., Yang, H., & Wang, X. (2013) · Developmental Cell · doi:10.1016/j.devcel.2013.11.010 · Cited by 319 · see citing works
<i>BRANCHED1</i> Promotes Axillary Bud Dormancy in Response to Shade in <i>Arabidopsis</i>
González-Grandío, E., Poza-Carrión, C., Sorzano, C. O. S., & Cubas, P. (2013) · The Plant Cell · doi:10.1105/tpc.112.108480 · Cited by 272 · see citing works
Teichmann, T., & Muhr, M. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00233 · Cited by 228 · see citing works
“The auxin canalization hypothesis (reviewed in Domagalska and Leyser, 2011) suggests a feed forwardmechanism to explain the establishment of polar auxin transport routes that induce the development of vascular tissues.”
BackgroundWaters, M. T., Brewer, P. B., Bussell, J. D., Smith, S. M., & Beveridge, C. A. (2012) · Plant Physiology · doi:10.1104/pp.112.196253 · Cited by 232 · see citing works
The Stem Cell Niche in Leaf Axils Is Established by Auxin and Cytokinin in <i>Arabidopsis</i>
Wang, Y., Wang, J., Shi, B., Yu, T., Qi, J., Meyerowitz, E. M., & Jiao, Y. (2014) · The Plant Cell · doi:10.1105/tpc.114.123083 · Cited by 207 · see citing works
Two-Step Regulation of a Meristematic Cell Population Acting in Shoot Branching in Arabidopsis
Shi, B., Zhang, C., Tian, C., Wang, J., Wang, Q., Xu, T., Xu, Y., Ohno, C., Sablowski, R., Heisler, M. G., et al. (2016) · PLoS Genetics · doi:10.1371/journal.pgen.1006168 · Cited by 150 · see citing works
Tian, C., Zhang, X., He, J., Yu, H., Wang, Y., Shi, B., Han, Y., Wang, G., Feng, X., Zhang, C., et al. (2014) · Molecular Systems Biology · doi:10.15252/msb.20145470 · Cited by 133 · see citing works
Using Arabidopsis to Study Shoot Branching in Biomass Willow
Ward, S. P., Salmon, J., Hanley, S. J., Karp, A., & Leyser, O. (2013) · Plant Physiology · doi:10.1104/pp.113.218461 · Cited by 25 · see citing works
Self-citation
- Authors
- Domagalska, M. A., & Leyser, O.
- Affiliations
- University of York (GB)
- University of Cambridge (GB)
- Corresponding author
- Leyser, Ottoline
- Venue
- Nature Reviews Molecular Cell Biology
- Published
- 2011-03-23
- Volume
- 12
- Issue
- 4
- Pages
- 211-221
- ISSN
- 1471-0072 (ISSN-L)
- 1471-0080
- OpenAlex
- W2047380316
- Cited by
- 835
- References
- 13
- Citations by year
- 2026: 47 · 2025: 49 · 2024: 44 · 2023: 54 · 2022: 70 · 2021: 78 · 2020: 55 · 2019: 50 · 2018: 38 · 2017: 64 · 2016: 40 · 2015: 62 · 2014: 53 · 2013: 62 · 2012: 47
- FWCI
- 5.85
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Reviews Molecular Cell Biology (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Gatsby Charitable Foundation
- European Commission
- Directorate for Biological Sciences
- Biotechnology and Biological Sciences Research Council
- Topics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Parasitism and Resistance
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant nutrient uptake and metabolism
- Keywords
- shoot branching, auxin, strigolactones, cytokinins, apical dominance, axillary buds, plant hormone signaling, systemic signaling
- MeSH terms
- Biological Transport, Indoleacetic Acids, Models, Biological, Plant Growth Regulators, Plant Proteins, Plants, Second Messenger Systems, Signal Transduction, Gene Expression Regulation, Plant, Plant Shoots, Plant Development
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review