How retroviruses select their genomes
Cited by (339)
Items 201–300 of 339
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- Biochemical and functional characterization of mouse mammary tumor virus full-length Pr77Gag expressed in prokaryotic and eukaryotic cellsChameettachal, Akhil, Pillai, Vineeta Narayana, Ali, Lizna Mohamed, Pitchai, Fathima Nuzra Nagoor, Ardah, Mustafa Taleb, Mustafa, Farah, Marquet, Roland, Rizvi, Tahir Aziz · 2018 · Viruses
- Femtomole SHAPE Reveals Regulatory Structures in the Authentic XMRV RNA GenomeJacob K. Grohman, Sumith Kottegoda, Robert J. Gorelick, Nancy L. Allbritton, Kevin M. Weeks · 2011 · Journal of the American Chemical Society
- Perturbing HIV-1 Ribosomal Frameshifting Frequency Reveals a cis Preference for Gag-Pol Incorporation into Assembling VirionsBayleigh E. Benner, James W. Bruce, Jacob R. Kentala, Magdalena B. Murray, Jordan T. Becker, Pablo Garcia-Miranda, Paul Ahlquist, Samuel E. Butcher, Nathan M. Sherer · 2021 · Journal of Virology
- Sequence analysis of peptide:oligonucleotide heteroconjugates by electron capture dissociation and electron transfer dissociationKady L. Krivos, Patrick A. Limbach · 2010 · Journal of the American Society for Mass Spectrometry
- Mutations in the Basic Region of the Mason-Pfizer Monkey Virus Nucleocapsid Protein Affect Reverse Transcription, Genomic RNA Packaging, and the Virus Assembly SiteAlžběta Dostálková, Filip Kaufman, Ivana Křížová, Anna Kultová, Karolína Strohalmová, Romana Hadravová, Tomáš Ruml, Michaela Rumlová · 2018 · Journal of Virology
- Identification of Pr78Gag Binding Sites on the Mason-Pfizer monkey virus genomic RNA packaging determinantsPitchai, Fathima Nuzra Nagoor, Chameettachal, Akhil, Vivet-Boudou, Valérie, Ali, Lizna Mohamed, Pillai, Vineeta N., Krishnan, Anjana, Bernacchi, Serena, Mustafa, Farah, Marquet, Roland, Rizvi, Tahir A. · 2021 · Journal of Molecular Biology
- Development of a Cell-Based Assay Probing the Specific Interaction between the Human Immunodeficiency Virus Type 1 Nucleocapsid and Psi RNA In VivoSoo-In Jang, Young Ho Kim, S. Paik, Ji-Chang You · 2007 · Journal of Virology
- Expression, purification, and characterization of biologically active full-length Mason-Pfizer monkey virus (MPMV) Pr78GagFathima Nuzra Nagoor Pitchai, Lizna Mohamed Ali, Vineeta Narayana Pillai, Akhil Chameettachal, S. M. Ashraf, Farah Mustafa, Roland Marquet, Tahir Aziz Rizvi · 2018 · Scientific Reports
- Purification and functional characterization of a biologically active full-length feline immunodeficiency virus (FIV) Pr50GagKrishnan, Anjana, Pillai, Vineeta N., Chameettachal, Akhil, Mohamed Ali, Lizna, Nuzra Nagoor Pitchai, Fathima, Tariq, Saeed, Mustafa, Farah, Marquet, Roland, A. Rizvi, Tahir · 2019 · Viruses
- The Integrase: An Overview of a Key Player Enzyme in the Antiviral ScenarioGioele Renzi, Fabrizio Carta, Claudiu Trandafir Supuran · 2023 · International Journal of Molecular Sciences
- A prospective on drug abuse-associated epigenetics and HIV-1 replicationJui Pandhare, C. Dash · 2010 · Life Science
- In Vivo, Large-Scale Preparation of Uniformly 15N- and Site-Specifically 13C-Labeled Homogeneous, Recombinant RNA for NMR StudiesMy Tra Le, Rachel E. Brown, Anne E. Simon, Theodore Kwaku Dayie · 2015 · Methods in enzymology on CD-ROM/Methods in enzymology
- Sequence requirements for localization and packaging of Ty3 retroelement RNAKristina Clemens, V. Bilanchone, N. Beliakova-Bethell, Liza S. Z. Larsen, Kim Dan Nguyen, S. Sandmeyer · 2012 · Virus Research
- Retroviral-like determinants and functions required for dimerization of Ty1 retrotransposon RNAJulita Gumna, Katarzyna J. Purzycka, Hyo Won Ahn, David J Garfinkel, Katarzyna Pachulska‐Wieczorek · 2019 · RNA Biology
- Evidence of a Direct Evolutionary Selection for Strong Folding and Mutational Robustness Within HIV Coding RegionsEli Goz, Tamir Tuller · 2016 · Journal of Computational Biology
- Gene therapy: Regulations, ethics and its practicalities in liver diseaseXi Jin, Yida Yang, Youming Li · 2008 · World Journal of Gastroenterology
- Mobilization of Full-Length Semliki Forest Virus Replicon by Retrovirus ParticlesÉric Piver, Christine Collin, Noémie Renault, Thierry Bru, Jean‐Christophe Pagès · 2006 · Journal of Virology
- Role of Purine-Rich Regions in Mason-Pfizer Monkey Virus (MPMV) Genomic RNA Packaging and PropagationLizna Mohamed Ali, Fathima Nuzra Nagoor Pitchai, Valérie Vivet‐Boudou, Akhil Chameettachal, Ayesha Jabeen, Vineeta Narayana Pillai, Farah Mustafa, Roland Marquet, Tahir Aziz Rizvi · 2020 · Frontiers in Microbiology
- Mapping the Small RNA Content of Simian Immunodeficiency Virions (SIV)Markus Brameier, Wiebke Ibing, Katharina Höfer, Judith Montag, Christiane Stahl‐Hennig, Dirk Motzkus · 2013 · PLoS ONE
- NMR Studies of Retroviral Genome PackagingPatricia S. Boyd, Janae B. Brown, Joshua D. Brown, Jonathan Catazaro, Issac Chaudry, Pengfei Ding, Xinmei Dong, Jan Marchant, Colin O’Hern, Karndeep Singh et al. · 2020 · Viruses
- Multimerization of the p12 domain is necessary for Mason–Pfizer monkey virus Gag assembly in vitroZdeněk Knejzlı́k, Zdena Smékalová, Tomáš Ruml, Michael Sakalian · 2007 · Virology
- Canid genomics: Mapping genes for behavior in the silver foxTyrone C. Spady, Elaine A. Ostrander · 2007 · Genome Research
- Visualization of Retroviral Gag-Genomic RNA Cellular Interactions Leading to Genome Encapsidation and Viral Assembly: An OverviewBernacchi, Serena · 2022 · Viruses
- Encapsidation Determinants Located Downstream of the Major Splice Donor in the Maedi-Visna Virus Leader RegionHelga Bjarnadóttir, Bjarki Guðmundsson, Janus Freyr Guðnason, Jón J. Jónsson · 2006 · Journal of Virology
- New Structure Sheds Light on Selective HIV-1 Genomic RNA PackagingErik D. Olson, William A. Cantara, Karin Musier‐Forsyth · 2015 · Viruses
- A Stretch of Unpaired Purines in the Leader Region of Simian Immunodeficiency Virus (SIV) Genomic RNA is Critical for its Packaging into VirionsVineeta Narayana Pillai, Lizna Mohamed Ali, Suresh Prabhu, Anjana Krishnan, Akhil Chameettachal, Fathima Nuzra Nagoor Pitchai, Farah Mustafa, Tahir Aziz Rizvi · 2021 · Journal of Molecular Biology
- Chromosomal Mapping of Canine-Derived BAC Clones to the Red Fox and American Mink GenomesAnna V. Kukekova, Nadegda V. Vorobieva, Violetta R. Beklemisheva, Jennifer Lynn Johnson, Svetlana V. Temnykh, Dmitry V. Yudkin, Lyudmila N. Trut, Catherine André, Francis Galibert, Geoffrey K. Aguirre et al. · 2009 · Journal of Heredity
- Evolution driven by a varying host environment selects for distinct HIV-1 entry phenotypes and other informative variantsShuntai Zhou, Nathan Long, Ronald I. Swanstrom · 2023 · Frontiers in Virology
- HIV-1 RNAs whose transcription initiates from the third deoxyguanosine of GGG tract in the 5′ long terminal repeat serve as a dominant genome for efficient provirus DNA formationTakeshi Yoshida, Yuho Kasuya, Hiroyuki Yamamoto, Gota Kawai, Ken‐Ichi Hanaki, Tetsuro Matano, Takao Masuda · 2024 · Journal of Virology
- 1H, 13C, and 15N chemical shift assignments of ZCCHC9María Carmen Sañudo, Martin Jacko, Christiane Rammelt, Štěpánka Vaňáčová, Richard Štefl · 2010 · Biomolecular NMR Assignments
- INTERGENERATIONAL PHENOTYPIC MIXING IN VIRAL EVOLUTIONClaude Loverdo, James O. Lloyd‐Smith · 2013 · Evolution
- Formation of a metastable intramolecular RNA kissing complex by nanomanipulationPan T.X. Li · 2013 · Soft Matter
- Perturbing HIV-1 Ribosomal Frameshifting Frequency Reveals a cis Preference for Gag-Pol Incorporation into Assembling VirionsBayleigh E. Benner, James W. Bruce, Jacob R. Kentala, Magdalena B. Murray, Jordan T. Becker, Pablo García‐Miranda, Paul Ahlquist, Samuel E. Butcher, Nathan M. Sherer · 2022 · idUS (Universidad de Sevilla)
- Identification of a putative Gag binding site critical for feline immunodeficiency virus genomic RNA packagingKrishnan, Anjana, Ali, Lizna M., Prabhu, Suresha G., Pillai, Vineeta N., Chameettachal, Akhil, Vivet-Boudou, Valérie, Bernacchi, Serena, Mustafa, Farah, Marquet, Roland, Rizvi, Tahir A. · 2024 · RNA
- Rev Revisited: Additional Functions of the HIV-1 Rev ProteinBastian Grewe, Klaus Überla · 2010 · WORLD SCIENTIFIC eBooks
- Cu(II)-Based Paramagnetic Probe to Study RNA–Protein Interactions by NMRLeah M. Seebald, Christopher M. DeMott, Srivathsan Ranganathan, Papa Nii Asare‐Okai, Anastasia Glazunova, Alan A. Chen, Alexander G. Shekhtman, Maksim Royzen · 2017 · Inorganic Chemistry
- Overview of RetrovirologyNaomi E. Rosenberg · 2010 · Springer eBooks
- Distinct Gag interaction properties of HIV-1 RNA 5′ leader conformers reveal a mechanism for dimeric genome selectionXin Thomas Yang, Yong Liu, Wen Cui, Mengmeng Liu, Wei Wang · 2022 · RNA
- MoMuLV and HIV-1 Nucleocapsid Proteins Have a Common Role in Genomic RNA Packaging but Different in Late Reverse TranscriptionCélia Chamontin, Bing Yu, Pierre‐Jean Racine, Jena-Luc Darlix, Marylène Mougel · 2012 · PLoS ONE
- Stabilizing role of structural elements within the 5´ Untranslated Region (UTR) and gag sequences in Mason-Pfizer monkey virus (MPMV) genomic RNA packagingRawan M. Kalloush, Valérie Vivet‐Boudou, Lizna Mohamed Ali, Vineeta Narayana Pillai, Farah Mustafa, Roland Marquet, Tahir Aziz Rizvi · 2019 · RNA Biology
- Cobalt-based paramagnetic probe to study RNA-protein interactions by NMRLeah M. Seebald, Christopher M. DeMott, Srivathsan Ranganathan, Papa Nii Asare‐Okai, Anastasia Glazunova, Alan A. Chen, Alexander G. Shekhtman, Maksim Royzen · 2017 · Journal of Inorganic Biochemistry
- HIV-1 B-subtype capsid protein: a characterization of amino acid’s conservation and its significant association with integrase signaturesSalvatore Dimonte, Muhammed Babakir‐Mina, Stefano Aquaro · 2014 · Virus Genes
- HIV-1 Gag co-localizes with euchromatin histone marks at the nuclear peripheryJordan T. Chang, Leslie J. Parent · 2023 · Journal of Virology
- Moloney murine leukemia virus genomic RNA packaged in the absence of a full complement of wild type nucleocapsid proteinSilas F. Johnson, Eric L. Garcia, Michael F. Summers, Alice Telesnitsky · 2012 · Virology
- Determinants of Moloney Murine Leukemia Virus Gag-Pol and Genomic RNA ProportionsSilas F. Johnson, John T. Collins, Victoria M. D’Souza, Alice Telesnitsky · 2014 · Journal of Virology
- On the conformational stability of the smallest RNA kissing complexes maintained through two G·C base pairsWally Chu, Akila Weerasekera, Chul‐Hyun Kim · 2017 · Biochemical and Biophysical Research Communications
- Fluorescent Protein Inserts in between NC and SP2 Are Tolerated for Assembly, Release and Maturation of HIV with Limited InfectivityMourad Bendjennat, Saveez Saffarian · 2019 · Viruses
- Ty3, a Position-specific Retrotransposon in Budding YeastSuzanne B. Sandmeyer, Kurt Patterson, Virginia Bilanchone · 2015 · ASM Press eBooks
- TRAMP Stimulation of ExosomePeter Holub, Štěpánka Vaňáčová · 2012 · The Enzymes
- Expression, purification, and functional characterization of soluble recombinant full-length simian immunodeficiency virus (SIV) Pr55GagPillai, Vineeta N., Ali, Lizna Mohamed, Prabhu, Suresha G., Krishnan, Anjana, Tariq, Saeed, Mustafa, Farah, Rizvi, Tahir A. · 2023 · Heliyon
- Beyond reverse transcription: molecular mechanisms and emerging paradigms in retroviral replicationJehad, Mohammad Abdullah, Ali, Lizna M, Pillai, Vineeta N, Prabhu, Suresha G, Mustafa, Farah, Rizvi, Tahir A · 2026 · FEMS Microbiology Reviews
- HIV-1 Packaging Visualised by In-Gel SHAPEAaron R. D’Souza, Dhivya Jayaraman, Ziqi Long, Jingwei Zeng, Liam J. Prestwood, Charlene Chan, Dennis Kappei, Andrew M. L. Lever, Julia C. Kenyon · 2021 · Viruses
- Expression, purification, and characterization of full-length bovine leukemia virus Gag protein from bacterial cultureDominic F. Qualley, Bethany L Boleratz · 2013 · Protein Expression and Purification
- Viral SELEX reveals individual and cooperative roles of the C-box and G-box in HIV-2 replicationChristy L. Strong, Jean-Marc Lanchy, J. Stephen Lodmell · 2011 · RNA
- RNA Binding Properties of the Ty1 LTR-Retrotransposon Gag ProteinJulita Gumna, Angelika Andrzejewska-Romanowska, David J Garfinkel, Katarzyna Pachulska‐Wieczorek · 2021 · International Journal of Molecular Sciences
- Nonsuppressible viremia during HIV-1 therapy meets molecular virologyAnn Emery, Sarah Joseph, Ronald I. Swanstrom · 2023 · Journal of Clinical Investigation
- Influence of untranslated regions on retroviral mRNA transfer and expressionAnne Prel, Luc Sensebé, Jean‐Christophe Pagès · 2013 · BMC Biotechnology
- Le virus du Sida au milieu du gué vingt-cinq ans aprèsJean‐Luc Darlix, Yves Lévy · 2008 · médecine/sciences
- Detection and differentiation of murine leukemia virus (MLV) and murine stem cell virus (MSCV) and therefrom derived nucleic acidsWolfram Volkwein, Melanie Pavlovic, Martina Anton, Maren Haase, Thorsten Stellberger, Amin Jarrar, Ulrich Busch, Armin E. Baiker · 2021 · Journal of Virological Methods
- The HIV-1 nucleocapsid protein does not function as a transcriptional activator on its own cognate promoterHoe Won Jeong, Seon Hee Kim, So Young Sim, Kyung Lee Yu, Ji Chang You · 2011 · Virus Research
- A unique, thermostable dimer linkage structure of RD114 retroviral RNASergei Kharytonchyk, Finn Skou Pedersen · 2010 · RNA
- The Assembly of HTLV-1—How Does It Differ from HIV-1?Dominik Herrmann, Shuyu Meng, Huixin Yang, Louis M. Mansky, Jamil S. Saad · 2024 · Viruses
- Molecular Characterization of Porcine Endogenous Retrovirus gag Genes from Pigs in KoreaJungeun Lee, Donghee Lee, J. Yoo, Gye-Woong Kim, Hong-Yang Park, Hoon-Taek Lee, Y. B. Kim · 2006 · Journal of Bacteriology and Virology
- Identification of a high affinity nucleocapsid protein binding element from the bovine leukemia virus genomeF. Zehra Yildiz, Kathlene Babalola, Michael F. Summers · 2012 · Virus Research
- Retroviruses and Retroviral InfectionsGeorge B. Kyei, William G. Powderly · 2016 · Elsevier eBooks
- Molecular Events in Late Stages of HIV-1 Replication.Jessica A. Sutton, Dominique R. Dotson, Xinhong Dong · 2013 · PubMed
- Insight into the intrinsic flexibility of the SL1 stem‐loop from genomic RNA of HIV‐1 as probed by molecular dynamics simulationSonia Mazier, D. Genest · 2007 · Biopolymers
- RNA ‐centric world of retroviruses: unravelling the molecular strategies of genomic RNA packagingMohammad Abdullah Jehad, Suresh Prabhu, Lizna Mohamed Ali, Vineeta Narayana Pillai, Farah Mustafa, Tahir Aziz Rizvi · 2026 · Biological reviews/Biological reviews of the Cambridge Philosophical Society
- MMTV RNA packaging requires an extended long-range interaction for productive Gag binding to packaging signalsPrabhu, Suresha G., Pillai, Vineeta N., Ali, Lizna Mohamed, Vivet-Boudou, Valérie, Chameettachal, Akhil, Bernacchi, Serena, Mustafa, Farah, Marquet, Roland, Rizvi, Tahir A. · 2024 · PLOS Biology
- HIV Recombination and Pathogenesis – Biological and Epidemiological ImplicationsNitin K., Elvin Dominic, Bin Wang · 2011 · InTech eBooks
- Using RT-prone recombination to promote re-building of complete retroviral vectors from two defective precursors: Low efficiency and sequence specificitiesThierry Bru, Román Galetto, Éric Piver, Christine Collin, Matteo Negroni, Jean‐Christophe Pagès · 2007 · Journal of Virological Methods
- Rous Sarcoma Virus: Contributions of a Chicken Virus to Tumor Biology, Human Cancer Therapeutics, and RetrovirologyLeslie J. Parent · 2011 · Springer eBooks
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- Genotypic Analysis of HIV Co-Receptor UsageSaleta Sierra, Rolf Kaiser, Alexander Thielen, Oliver Sander, Thomas Lengauer · 2008 · Springer eBooks
- Nuclear Magnetic Resonance Spectroscopy to Study Virus StructureJosé L. Neira · 2013 · Sub-cellular biochemistry/Subcellular biochemistry
- Translation initiation of the HIV-1 mRNAThéophile Ohlmann, Chloé Mengardi, Marcelo López‐Lastra · 2014 · Translation
- Nuclear Magnetic Resonance Spectroscopy to Study Virus StructureJosé L. Neira · 2024 · Sub-cellular biochemistry/Subcellular biochemistry
- A study of selected environmental issues related to the production of plasmid DNA for application in gene therapyGary Walsh, Tom O'Dwyer, Finola E. Cliffe · 2010 · University of Limerick Institutional Repository (University of Limerick)
- Investigation of the molecular epidemiology of HIV-1 in Khayelitsha, Cape Town, using serotyping and genotyping techniquesGraeme Brendon Jacobs · 2005 · SUNScholar (Stellenbosch University)
- STUDIES OF THE DIMERIZATION AND PACKAGING SIGNALS IN HIV-2 RNATayyba T. Baig · 2008 · The Mathematics Enthusiast
- Moloney Murine Leukemia Virus RNA Recruitment.Eric L. Garcia · 2010 · Deep Blue (University of Michigan)
- Identification and Characterization of Agv1, a Pre-Metazoan Arf GAP: A DissertationKimberly R. Long · 2007 · The Journal of the American Medical Association (JAMA) Network (American Medical Association)
- Molecular Counting in Moloney Murine Leukemia Virus Assembly.Silas F. Johnson · 2012 · Deep Blue (University of Michigan)
- Seeking a mechanism of action for the anti-HIV properties of the CD8 antiviral factor, CAFVarsha Shridhar · 2011 · D-Scholarship@Pitt (University of Pittsburgh)
- Determinants of HIV-1 Gag Localization to Uropods in Polarized T Cells and the Role Uropods Play in Virus Spread.George N. Llewellyn · 2012 · Deep Blue (University of Michigan)
- HIV-1: Packaging a Shifty Genome?Michael A. Durney, Victoria M. D’Souza · 2013 · Cell Host & Microbe
- HIV-1 specifically encapsidates other nucleic acids than its genomic RNALudovic Didierlaurent, Laurent Houzet, Jean‐Christophe Paillart, Zakia Morichaud, Fatima O. Smagulova, Stéphan Maurel, Roland Marquet, Marylène Mougel · 2009 · Retrovirology
- Determination of Sequences Required for Human Endogenous Retrovirus K Transduction and Its Recognition by Foreign Retroviral VirionsOtto W Erlwein, Nathan P. Sweeney, Raffaele de Leon, Gillian S. Wills, Mark J. Robinson, Myra O. McClure · 2015 · Journal of Virology
- Analysis of RNA: Peptide Heteroconjugates by Electron Induced DissociationKady L. Krivos · 2011
- Reconstitution and Characterization of Human Endogenous Retrovirus-KYoung Nam Lee · 2025 · Digital Commons - RU (Rockefeller University)
- Optimal Packaging of Mason-Pfizer Monkey Virus (MPMV) Genomic RNA Depends on Conserved Long Range Interactions between U5 and GAG Complementary Sequences.Khaleel Kalloush, M Rawan · 2015
- The Mechanism of HIV-1 Genome DimerizationJun-ichi Sakuragi · 2008 · The Journal of AIDS Research
- Nucleic acid chaperone activity of retroviral nucleocapsid proteinsHao Wu · 2013
- Biochemical and Genetic Investigation of Immature Murine Leukemia Virus AssemblySedef Tinaztepe · 2017
- A baculovirus-mediated expression system for the analysis of HaSV RNA packagingAdriano Mendes · 2012
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