Early diagnosis of Pearson syndrome in neonatal intensive care following rapid mitochondrial genome sequencing in tandem with exome sequencing.
Open accessAbstract
Rapid genomic testing is a valuable new diagnostic tool for acutely unwell infants, however exome sequencing does not deliver clinical-grade mitochondrial genome sequencing and may fail to diagnose mitochondrial disorders caused by mitochondrial DNA (mtDNA) variants. Rapid mitochondrial genome sequencing and analysis are not routinely available in rapid genomic diagnosis programmes. We present two critically ill neonates with transfusion-dependent anaemia and persistent lactic acidosis who underwent rapid mitochondrial genome sequencing in tandem with exome sequencing as part of an exome sequencing-based rapid genomic diagnosis programme. No diagnostic variants were identified on examination of the nuclear exome data for either infant. Mitochondrial genome sequencing identified a large mtDNA deletion in both infants, diagnosing Pearson syndrome within 74 and 55 h, respectively. Early diagnosis in the third week of life allowed the avoidance of a range of other investigations and appropriate treatment planning. Rapid mitochondrial genome analysis provides additional diagnostic and clinical utility and should be considered as an adjunct to exome sequencing in rapid genomic diagnosis programmes.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Two diagnoses of Pearson syndrome caused by mitochondrial deletions were obtained through concurrent mitochondrial genome sequencing.
“Two molecular diagnoses of Pearson syndrome due to mitochondrial deletions were achieved through concurrent mitochondrial genome sequencing.17”
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Richards, S., Aziz, N., Bale, S., Bick, D., Das, S., Gastier-Foster, J., Grody, W. W., Hegde, M., Lyon, E., Spector, E., et al. (2015) · Genetics in Medicine · doi:10.1038/gim.2015.30 · Cited by 32,594 · see citing works
Paediatric genomics: diagnosing rare disease in children
Wright, C. F., FitzPatrick, D. R., & Firth, H. V. (2018) · Nature Reviews Genetics · doi:10.1038/nrg.2017.116 · Cited by 616 · see citing works
Rapid whole-genome sequencing decreases infant morbidity and cost of hospitalization
Farnaes, L., Hildreth, A., Sweeney, N. M., Clark, M. M., Chowdhury, S., Nahas, S., Cakici, J. A., Benson, W., Kaplan, R. H., Kronick, R., et al. (2018) · npj Genomic Medicine · doi:10.1038/s41525-018-0049-4 · Cited by 445 · see citing works
Use of Exome Sequencing for Infants in Intensive Care Units
Meng, L., Pammi, M., Saronwala, A., Magoulas, P. L., Ghazi, A. R., Vetrini, F., Zhang, J., He, W., Dharmadhikari, A. V., Qu, C., et al. (2017) · Archives of Pediatrics and Adolescent Medicine · doi:10.1001/jamapediatrics.2017.3438 · Cited by 429 · see citing works
Stark, Z., Tan, T. Y., Chong, B., Brett, G. R., Yap, P., Walsh, M., Yeung, A., Peters, H. L., Mordaunt, D., Cowie, S., et al. (2016) · Genetics in Medicine · doi:10.1038/gim.2016.1 · Cited by 398 · see citing works
Self-citationWillig, L., Petrikin, J., Smith, L. D., Saunders, C., Thiffault, I., Miller, N. A., Soden, S., Cakici, J. A., Herd, S. M., Twist, G. P., et al. (2015) · The Lancet Respiratory Medicine · doi:10.1016/s2213-2600(15)00139-3 · Cited by 340 · see citing works
Kohda, M., Tokuzawa, Y., Kishita, Y., Nyuzuki, H., Moriyama, Y., Mizuno, Y., Hirata, T., Yatsuka, Y., Yamashita-Sugahara, Y., Nakachi, Y., et al. (2016) · PLoS Genetics · doi:10.1371/journal.pgen.1005679 · Cited by 299 · see citing works
The incidence of inherited metabolic disorders in the West Midlands, UK
Sanderson, S. C., Green, A., Preece, M. A., & Burton, H. (2006) · Archives of Disease in Childhood · doi:10.1136/adc.2005.091637 · Cited by 253 · see citing works
Australian Genomics Health Alliance Acute Care Flagship, Lunke, S., Eggers, S., Wilson, M., Patel, C., Barnett, C. P., Pinner, J., Sandaradura, S. A., Buckley, M. F., Krzesinski, E. I., et al. (2020) · JAMA · doi:10.1001/jama.2020.7671 · Cited by 239 · see citing works
Self-citationWolf, N. I., & Smeitink, J. A. M. (2002) · Neurology · doi:10.1212/01.wnl.0000031795.91814.d8 · Cited by 232 · see citing works
Petrikin, J. E., Cakici, J. A., Clark, M. M., Willig, L. K., Sweeney, N. M., Farrow, E. G., Saunders, C. J., Thiffault, I., Miller, N. A., Zellmer, L., et al. (2018) · npj Genomic Medicine · doi:10.1038/s41525-018-0045-8 · Cited by 229 · see citing works
Stark, Z., SCHOFIELD, D. J., Martyn, M. M., Rynehart, L., Shrestha, R. N., Alam, K., Lunke, S., Tan, T. Y., Gaff, C., & White, S. M. (2018) · Genetics in Medicine · doi:10.1038/s41436-018-0006-8 · Cited by 173 · see citing works
Self-citationMeeting the challenges of implementing rapid genomic testing in acute pediatric care.
Stark, Z., Lunke, S., Brett, G. R., Tan, N. B., Stapleton, R., Kumble, S., Yeung, A., Phelan, D. G., Chong, B., Fanjul-Fernandez, M., et al. (2018) · Genetics in Medicine · doi:10.1038/gim.2018.37 · Cited by 159 · see citing works
Self-citationRapid Targeted Genomics in Critically Ill Newborns
van Diemen, C. C., Kerstjens‐Frederikse, W. S., Bergman, K. A., de Koning, T. J., Sikkema‐Raddatz, B., van der Velde, J. K., Abbott, K. M., Herkert, J. C., Löhner, K., Rump, P., et al. (2017) · PEDIATRICS · doi:10.1542/peds.2016-2854 · Cited by 148 · see citing works
Mestek, L., Clement, E. M., Jones, W. D., Drury, S., Ocaka, L., Gagunashvili, A. N., Stabej, P. L. Q., Bacchelli, C., Jani, N., Rahman, S., et al. (2018) · Journal of Medical Genetics · doi:10.1136/jmedgenet-2018-105396 · Cited by 128 · see citing works
Diagnostic odyssey of patients with mitochondrial disease
Grier, J., Hirano, M., Karaa, A., Shepard, E., & Thompson, J. L. P. (2018) · Neurology Genetics · doi:10.1212/nxg.0000000000000230 · Cited by 111 · see citing works
Erratum: Paediatric genomics: diagnosing rare disease in children
Wright, C. F., FitzPatrick, D. R., & Firth, H. V. (2018) · Nature Reviews Genetics · doi:10.1038/nrg.2018.12 · Cited by 103 · see citing works
Bergant, G., Maver, A., Lovrečić, L., Čuturilo, G., Hodžić, A., & Peterlin, B. (2017) · Genetics in Medicine · doi:10.1038/gim.2017.142 · Cited by 86 · see citing works
Honzík, T., Tesařová, M., Magner, M., Mayr, J. A., Ješina, P., Veselá, K., Wenchich, L., Szentiványi, K., Hansíková, H., Sperl, W., et al. (2012) · Journal of Inherited Metabolic Disease · doi:10.1007/s10545-011-9440-3 · Cited by 84 · see citing works
Revisiting mitochondrial diagnostic criteria in the new era of genomics
Witters, P., Saada, A., Honzík, T., Tesařová, M., Kleinle, S., Horváth, R., Goldstein, A. C., & Morava, É. (2017) · Genetics in Medicine · doi:10.1038/gim.2017.125 · Cited by 82 · see citing works
Wagner, M., Berutti, R., Lorenz‐Depiereux, B., Graf, E., Eckstein, G., Mayr, J. A., Meitinger, T., Ahting, U., Prokisch, H., Strom, T. M., et al. (2019) · Journal of Inherited Metabolic Disease · doi:10.1002/jimd.12109 · Cited by 78 · see citing works
First-line genomic diagnosis of mitochondrial disorders
Raymond, F. L., Horváth, R., & Chinnery, P. F. (2018) · Nature Reviews Genetics · doi:10.1038/s41576-018-0022-1 · Cited by 58 · see citing works
Farruggia, P., Marco, F. D., & Dufour, C. (2018) · Expert Review of Hematology · doi:10.1080/17474086.2018.1426454 · Cited by 56 · see citing works
Genome-wide sequencing in acutely ill infants: genomic medicine’s critical application?
Friedman, J. M., Bombard, Y., Cornel, M. C., Fernandez, C. V., Junker, A. K., Plon, S. E., Stark, Z., & Knoppers, B. M. (2019) · Genetics in Medicine · doi:10.1038/s41436-018-0055-z · Cited by 44 · see citing works
Self-citationWhole exome and whole genome sequencing with dried blood spot DNA without whole genome amplification
Bassaganyas, L., Freedman, G., Vaka, D., Wan, E., Lao, R., Chen, F., Kvale, M. N., Currier, R. J., Puck, J. M., & Kwok, P. (2017) · Human Mutation · doi:10.1002/humu.23356 · Cited by 41 · see citing works
Exome sequencing in neonates: diagnostic rates, characteristics, and time to diagnosis
Powis, Z., Hagman, K. D. F., Speare, V., Cain, T., Blanco, K., Shahmirzadi, L., Mayerhofer, E. M., Tilstra, D. J., Vedder, T., Hunter, J. M., et al. (2018) · Genetics in Medicine · doi:10.1038/gim.2018.11 · Cited by 38 · see citing works
Ring, J. D., Sturk‐Andreaggi, K., Peck, M. A., & Marshall, C. K. (2018) · Electrophoresis · doi:10.1002/elps.201800135 · Cited by 34 · see citing works
Melbourne Genomics Health Alliance, Stark, Z., Dashnow, H., Lunke, S., Tan, T. Y., Yeung, A., Sadedin, S., Thorne, N., Macciocca, I., Gaff, C., et al. (2017) · European Journal of Human Genetics · doi:10.1038/ejhg.2017.123 · Cited by 26 · see citing works
Self-citationRapid Identification of a Novel Complex I MT-ND3 m.10134C>A Mutation in a Leigh Syndrome Patient
Miller, D. K., Menezes, M. J., Simons, C., Riley, L. G., Cooper, S. T., Grimmond, S. M., Thorburn, D. R., Christodoulou, J., & Taft, R. J. (2014) · PLoS ONE · doi:10.1371/journal.pone.0104879 · Cited by 11 · see citing works
Self-citationThe clinical utility of next-generation sequencing in the neonatal intensive care unit
Bowdin, S. C. (2016) · Canadian Medical Association Journal · doi:10.1503/cmaj.160490 · Cited by 9 · see citing works
Laboratory Investigation of Mitochondrial Diseases
Taylor, R. W., & Thorburn, D. R. (2018) · Cambridge University Press eBooks · doi:10.1017/9781139192460.005 · Cited by 1 · see citing works
Self-citation
Flagged first, then by citations
Cited by
Sorted by citations
Australian Genomics Health Alliance Acute Care Flagship, Lunke, S., Eggers, S., Wilson, M., Patel, C., Barnett, C. P., Pinner, J., Sandaradura, S. A., Buckley, M. F., Krzesinski, E. I., et al. (2020) · JAMA · doi:10.1001/jama.2020.7671 · Cited by 239 · see citing works
Self-citationFrazier, A. E., Compton, A. G., Kishita, Y., Hock, D. H., Welch, A. E., Amarasekera, S. S. C., Rius, R., Formosa, L. E., Imai‐Okazaki, A., Francis, D. I., et al. (2020) · Med · doi:10.1016/j.medj.2020.06.004 · Cited by 68 · see citing works
Self-citationQuantifying constraint in the human mitochondrial genome
Lake, N. J., Ma, K., Liu, W., Battle, S. L., Laricchia, K. M., Tiao, G., Puiu, D., Ng, K. K., Cohen, J., Compton, A. G., et al. (2024) · Nature · doi:10.1038/s41586-024-08048-x · Cited by 63 · see citing works
Self-citationMulticenter Consensus Approach to Evaluation of Neonatal Hypotonia in the Genomic Era: A Review
Morton, S. U., Christodoulou, J., Costain, G., Francesco Muntoni, A., Wakeling, E. L., Wojcik, M. H., French, C. E., Szuto, A., Dowling, J. J., Cohn, R. D., et al. (2022) · JAMA Neurology · doi:10.1001/jamaneurol.2022.0067 · Cited by 45 · see citing works
Self-citationDiagnosing Mitochondrial Disorders Remains Challenging in the Omics Era
Forny, P., Footitt, E. J., Davison, J. E., Lam, A., Woodward, C. E., Batzios, S. P., Bhate, S., Chakrapani, A., Cleary, M., Gissen, P., et al. (2021) · Neurology Genetics · doi:10.1212/nxg.0000000000000597 · Cited by 34 · see citing works
Giorgio, A. D., Bartolini, E., Calvo, P. L., Cananzi, M., Cirillo, F., Corte, C. D., Dionisi‐Vici, C., Indolfi, G., Iorio, R. F., Maggiore, G., et al. (2021) · Digestive and Liver Disease · doi:10.1016/j.dld.2021.03.004 · Cited by 31 · see citing works
Amarasekera, S. S. C., Hock, D. H., Lake, N. J., Calvo, S. E., Grønborg, S. W., Krzesinski, E. I., Amor, D. J., Fahey, M. C., Simons, C., Wibrand, F., et al. (2023) · Human Molecular Genetics · doi:10.1093/hmg/ddad069 · Cited by 23 · see citing works
Self-citationOuyang, X., Zhang, Y., Zhang, L., Luo, J., Zhang, T., Hu, H., Liu, L., Zhong, L., Zeng, S., Xu, P., et al. (2021) · Frontiers in Genetics · doi:10.3389/fgene.2021.725259 · Cited by 25 · see citing works
Long, J. C., Best, S., Hatem, S., Theodorou, T., Catton, T., Murray, S., Braithwaite, J., & Christodoulou, J. (2021) · Orphanet Journal of Rare Diseases · doi:10.1186/s13023-021-01939-6 · Cited by 20 · see citing works
Self-citationHock, D. H., Caruana, N. J., Semcesen, L. N., Lake, N. J., Formosa, L. E., Amarasekera, S. S. C., Stait, T. L., Tregoning, S., Frajman, L. E., Bournazos, A., et al. (2025) · Genome Medicine · doi:10.1186/s13073-025-01467-z · Cited by 28 · see citing works
Self-citationClinical and genetic features of four patients with Pearson syndrome
Son, J. S., Seo, G. H., Kim, Y.-M., Kim, G.-H., Jin, H. K., Bae, J.-S., Im, H. J., Yoo, H.-W., & Lee, B. H. (2022) · Medicine · doi:10.1097/md.0000000000028793 · Cited by 19 · see citing works
Atilano, S. R., Udar, N., Satalich, T. A., Udar, V., Chwa, M., & Kenney, M. C. (2021) · PLoS ONE · doi:10.1371/journal.pone.0246114 · Cited by 14 · see citing works
Rius, R., Compton, A. G., Baker, N. L., Balasubramaniam, S., Best, S., Bhattacharya, K., Boggs, K., Boughtwood, T. F., Braithwaite, J., Bratkovic, D., et al. (2024) · Genetics in Medicine · doi:10.1016/j.gim.2024.101271 · Cited by 11 · see citing works
Self-citationChad, L., Anderson, J., Cagliero, D., Hayeems, R. Z., Ly, L. G., & Szuto, A. (2022) · Hospital Pediatrics · doi:10.1542/hpeds.2022-006654 · Cited by 11 · see citing works
New-Onset Refractory Status Epilepticus Due to a Novel MT-TF Variant
Indelicato, E., Pfeilstetter, J., Zech, M., Unterberger, I., Wanschitz, J., Berweck, S., & Boesch, S. (2023) · Neurology Genetics · doi:10.1212/nxg.0000000000200063 · Cited by 9 · see citing works
Application of Genome Sequencing from Blood to Diagnose Mitochondrial Diseases
Rius, R., Compton, A. G., Baker, N. L., Welch, A. E., Coman, D. J., Kava, M. P., Minoche, A. E., Cowley, M. J., Thorburn, D. R., & Christodoulou, J. (2021) · Genes · doi:10.3390/genes12040607 · Cited by 9 · see citing works
Self-citationBall, M., Bouffler, S. E., Barnett, C. B., Freckmann, M., Hunter, M. F., Kamien, B., Kassahn, K. S., Lunke, S., Patel, C., Pinner, J. R., et al. (2024) · Genetics in Medicine · doi:10.1016/j.gim.2024.101293 · Cited by 8 · see citing works
Self-citationHock, D. H., Caruana, N. J., Semcesen, L. N., Lake, N. J., Formosa, L. E., Amarasekera, S. S. C., Stait, T. L., Tregoning, S., Frajman, L. E., Robinson, D. R. L., et al. (2024) · medRxiv · doi:10.1101/2024.08.06.24311318 · Cited by 4 · see citing works
Self-citationPrimary Mitochondrial Disorders in the Neonate
Starosta, R. T., & Shinawi, M. S. (2022) · NeoReviews · doi:10.1542/neo.23-12-e796 · Cited by 3 · see citing works
Hematologic Manifestations in Primary Mitochondrial Diseases
Selvanathan, A., Teo, J., & Sankaran, B. P. (2024) · Journal of Pediatric Hematology/Oncology · doi:10.1097/mph.0000000000002890 · Cited by 2 · see citing works
Efficacy of universal genome sequencing in infant extracorporeal membrane oxygenation
Carr, N., Fulmer, M. L., Rumpel, J. A., Makkar, A., Mahmood, B., Keene, S. D., Rintoul, N. E., Wild, K. T., Ashrafi, A., Gogcu, S., et al. (2026) · Journal of Perinatology · doi:10.1038/s41372-026-02716-8 · Cited by 1 · see citing works
A useful method to diagnose Pearson syndrome mimicking Diamond–Blackfan anemia
Nishimura, T., Yamada, A. Y., Utoyama, M., Saito, Y., & Moritake, H. (2021) · Pediatrics International · doi:10.1111/ped.14385
Advances in Diagnosis of Mitochondrial Diseases: Case Report of an Infant with Pearson Syndrome
(2021) · International Journal of Case Reports · doi:10.28933/ijcr-2021-05-2505
Red cell disorders: anaemia, jaundice, polycythaemia and cyanosis
Roberts, I. A. G., & Bain, B. J. (2022) · doi:10.1002/9781119371601.ch2
Long, J. C., Best, S., Hatem, S., Theodorou, T., Catton, T., Murray, S., Braithwaite, J., & Christodoulou, J. (2021) · Figshare · doi:10.6084/m9.figshare.14978167
Self-citationLong, J. C., Best, S., Hatem, S., Theodorou, T., Catton, T., Murray, S., Braithwaite, J., & Christodoulou, J. (2021) · Figshare · doi:10.6084/m9.figshare.14978170
Self-citationLong, J. C., Best, S., Hatem, S., Theodorou, T., Catton, T., Murray, S., Braithwaite, J., & Christodoulou, J. (2021) · Figshare · doi:10.6084/m9.figshare.14978173
Self-citationColacurci, D., Sarno, L., Fiore, E., Raimondi, F., Martinelli, N., Sirico, A., Carlo, C. D., Bifulco, G., Guida, M., & Maruotti, G. M. (2026) · Genes · doi:10.3390/genes17080862
- Authors
- Akesson, L. S., Eggers, S., Love, C. J., Chong, B., Krzesinski, E. I., Brown, N. J., Tan, T. Y., Richmond, C. M., Thorburn, D. R., Christodoulou, J., Hunter, M. F., Lunke, S., & Stark, Z.
- Affiliations
- The University of Melbourne (AU)
- Victorian Clinical Genetics Services (AU)
- Monash Medical Centre (AU)
- Corresponding author
- Stark, Zornitza
- ORCID
- Venue
- European Journal of Human Genetics
- Published
- 2019-07-29
- Volume
- 27
- Issue
- 12
- Pages
- 1821-1826
- ISSN
- 1018-4813 (ISSN-L)
- 1476-5438
- PMC
- PMC6871088
- OpenAlex
- W2966491844
- Cited by
- 28
- References
- 31
- Citations by year
- 2026: 2 · 2025: 1 · 2024: 5 · 2023: 2 · 2022: 5 · 2021: 11 · 2020: 2
- FWCI
- 2.71
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- European Journal of Human Genetics (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Griffith Research Online (submittedVersion, other-oa)
- Funders
- Department of Health | National Health and Medical Research Council (GNT1113531)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomics and Rare Diseases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Clinical Biochemistry › Metabolism and Genetic Disorders
- Keywords
- Pearson syndrome, mitochondrial DNA deletions, exome sequencing, neonatal intensive care, transfusion-dependent anemia, lactic acidosis, mitochondrial disease, critically ill neonates
- MeSH terms
- Whole Genome Sequencing, Exome Sequencing, Congenital Bone Marrow Failure Syndromes, DNA, Mitochondrial, Female, Genetic Testing, Humans, Infant, Newborn, Lipid Metabolism, Inborn Errors, Male, Mitochondria, Muscular Diseases, Intensive Care, Neonatal, Mitochondrial Diseases, Early Diagnosis, Acyl-CoA Dehydrogenase, Long-Chain, Genome, Mitochondrial, Exome
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review