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Early selection of bZIP73 facilitated adaptation of japonica rice to cold climates
Open accessAbstract
Cold stress is a major factor limiting production and geographic distribution of rice (Oryza sativa). Although the growth range of japonica subspecies has expanded northward compared to modern wild rice (O. rufipogon), the molecular basis of the adaptation remains unclear. Here we report bZIP73, a bZIP transcription factor-coding gene with only one functional polymorphism (+511 G>A) between the two subspecies japonica and indica, may have facilitated japonica adaptation to cold climates. We show the japonica version of bZIP73 (bZIP73 Jap) interacts with bZIP71 and modulates ABA levels and ROS homeostasis. Evolutionary and population genetic analyses suggest bZIP73 has undergone balancing selection; the bZIP73Japallele has firstly selected from standing variations in wild rice and likely facilitated cold climate adaptation during initial japonica domestication, while the indica allele bZIP73Indwas subsequently selected for reasons that remain unclear. Our findings reveal early selection of bZIP73Japmay have facilitated climate adaptation of primitive rice germplasms.
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Citations
Cites
Genetic Structure and Diversity in Oryza sativa L.
Garris, A. J., Tai, T. H., Coburn, J., Kresovich, S., & McCouch, S. (2005) · Genetics · doi:10.1534/genetics.104.035642 · Cited by 1,137
Genome-wide scans for footprints of natural selection
Oleksyk, T. K., Smith, M. W., & O'Brien, S. J. (2010) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2009.0219 · Cited by 340
Cited by
Molecular Regulation of Plant Responses to Environmental Temperatures
Ding, Y., Shi, Y., & Yang, S. (2020) · Molecular Plant · doi:10.1016/j.molp.2020.02.004 · Cited by 787
Surviving and thriving: How plants perceive and respond to temperature stress
Ding, Y., & Yang, S. (2022) · Developmental Cell · doi:10.1016/j.devcel.2022.03.010 · Cited by 396
Transcription factors-golden keys to modulate the plant metabolism to develop salinity tolerance
Bhat, B. A., Mir, R. A., Mir, W. R., Hamdani, S. S., & Mir, M. A. (2024) · Plant Stress · doi:10.1016/j.stress.2024.100409 · Cited by 47
Metadata
- Authors
- Liu, C., Ou, S., Mao, B., Tang, J., Wang, W., Wang, H., Cao, S., Schläppi, M. R., Zhao, B., Xiao, G., Wang, X., & Chu, C.
- Venue
- Nature Communications
- Published
- 2018-08-17
- Volume
- 9
- Issue
- 1
- Pages
- 3302-3302
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W2887271574
- Cited by
- 278
- References
- 2
- FWCI
- 12.22
- Type
- journal article
- Language
- en
- Open access
- gold
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- Liu, C., Ou, S., Mao, B., Tang, J., Wang, W., Wang, H., Cao, S., Schläppi, M. R., Zhao, B., Xiao, G., Wang, X., & Chu, C. (2018). Early selection of bZIP73 facilitated adaptation of japonica rice to cold climates. Nature Communications. https://doi.org/10.1038/s41467-018-05753-w
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