Cited by 15Machine Learning in HealthcareCOVID-19 Clinical Research StudiesStatistical Methods in Epidemiology

Development and validation of self-monitoring auto-updating prognostic models of survival for hospitalized COVID-19 patients

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Levy, Todd J., Coppa, Kevin, Cang, Jinxuan, Barnaby, Douglas P., Paradis, Marc D., Cohen, Stuart L., Makhnevich, Alex, van Klaveren, David +4 more·2022·Nature Communications

Abstract

Clinical prognostic models can assist patient care decisions. However, their performance can drift over time and location, necessitating model monitoring and updating. Despite rapid and significant changes during the pandemic, prognostic models for COVID-19 patients do not currently account for these drifts. We develop a framework for continuously monitoring and updating prognostic models and apply it to predict 28-day survival in COVID-19 patients. We use demographic, laboratory, and clinical data from electronic health records of 34912 hospitalized COVID-19 patients from March 2020 until May 2022 and compare three modeling methods. Model calibration performance drift is immediately detected with minor fluctuations in discrimination. The overall calibration on the prospective validation cohort is significantly improved when comparing the dynamically updated models against their static counterparts. Our findings suggest that, using this framework, models remain accurate and well-calibrated across various waves, variants, race and sex and yield positive net-benefits.

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Authors
Levy, T. J., Coppa, K., Cang, J., Barnaby, D. P., Paradis, M. D., Cohen, S. L., Makhnevich, A., van Klaveren, D., Kent, D. M., Davidson, K. W., Hirsch, J. S., & Zanos, T. P.
Affiliations
  • Northwell Health (US)
  • Tufts Medical Center (US)
Corresponding author
Zanos, Theodoros P.
Venue
Nature Communications
Published
2022-11-10
Volume
13
Issue
1
Pages
6812-6812
ISSN
2041-1723 (ISSN-L)
OpenAlex
W4309077223
Cited by
14
References
80
Citations by year
2026: 2 · 2025: 1 · 2024: 5 · 2023: 6
FWCI
0.99
Type
journal article
Language
en
Open access
Locations
  • Nature Communications (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • EUR Research Repository (Erasmus University Rotterdam) (acceptedVersion, cc-by)
  • EUR Research Repository (Erasmus University Rotterdam) (submittedVersion, cc-by)
  • RePEc: Research Papers in Economics (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
Funders
  • U.S. Department of Health & Human Services | NIH | National Institute on Aging (R24AG064191)
  • U.S. Department of Health & Human Services | NIH | U.S. National Library of Medicine (R01LM012836)
  • U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (K23HL145114)
  • Patient-Centered Outcomes Research Institute (ME-1606-35555)
Topics
  • Physical Sciences › Computer Science › Artificial Intelligence › Machine Learning in Healthcare
  • Health Sciences › Medicine › Infectious Diseases › COVID-19 Clinical Research Studies
  • Physical Sciences › Mathematics › Statistics and Probability › Statistical Methods in Epidemiology
Keywords
COVID-19 pandemic, prognostic model, model drift, model updating, self-monitoring, hospitalized patients, model calibration, model discrimination, electronic health records, net benefit, SARS-CoV-2 variants
MeSH terms
COVID-19, Calibration, Humans, Prognosis, Retrospective Studies, Cohort Studies, Pandemics

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