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Molecular basis of prostaglandin E2 reuptake by organic anion transporter PGT
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Abstract
Abstract Prostaglandins (PGs) are bioactive lipids that regulate inflammation, reproduction, and vasopermeability. Timely clearance of excessive PGs is critical to prevent potential damages caused by prolonged signalling. The high-affinity prostaglandin transporter (PGT) plays an essential role in this termination process by efficiently re-uptaking PGs into cells. Here, we report human PGT structures in different oligomerization and substrate-binding states. Beyond the canonical MFS-fold, PGT harbours a unique cystine-rich extracellular segment that incorporates a Kazal-like domain crucial for PGT localization and activity. Two distinct PGE2-bound structures revealed essential elements for substrate recognition, elucidating a PGE2-flipping process during the multi-stop translocation cycle. Notably, PGT dimerizes in detergent micelles and lipid nanodiscs. This dimerization drastically increases the mobility of the extracellular region and induces a profound rotation of the C-domain transmembrane helices, an unprecedented observation for MFS transporters. These functionally distinct snapshots thus shed light on prostaglandin clearance and reveal uncommon features of MFS transporters.
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Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
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Research works printed but not linked: 59
- Miller, S. B. Prostaglandins in health and disease: an overview. Semin. Arthritis Rheum. 36, 37–49 (2006). · DOI
- Alexander, C. L., Miller, S. J. & Abel, S. R. Prostaglandin analog treatment of glaucoma and ocular hypertension. Ann. Pharmacother. 36, 504–511 (2002). · DOI
- Yount, S. M. & Lassiter, N. The pharmacology of prostaglandins for induction of labor. J. Midwifery Women’s. Health 58, 133–144 (2013). · DOI
- Biringer, R. G. The enzymology of the human prostanoid pathway. Mol. Biol. Rep. 47, 4569–4586 (2020). · DOI
- Smyth, E. M., Grosser, T., Wang, M., Yu, Y. & FitzGerald, G. A. Prostanoids in health and disease. J. Lipid Res. 50, S423–S428 (2009). · DOI
- Kanai, N. et al. Identification and characterization of a prostaglandin transporter. Science 268, 866–869 (1995). · DOI
- Schuster, V. L., Chi, Y. & Lu, R. The prostaglandin transporter: eicosanoid reuptake, control of signaling, and development of high-affinity inhibitors as drug candidates. Trans. Am. Clin. Climatol. Assoc. 126, 248–257 (2015).
- Chan, B. S., Endo, S., Kanai, N. & Schuster, V. L. Identification of lactate as a driving force for prostanoid transport by prostaglandin transporter PGT. Am. J. Physiol. Ren. Physiol. 282, F1097–F1102 (2002). · DOI
- Shimada, H., Nakamura, Y., Nakanishi, T. & Tamai, I. OATP2A1/SLCO2A1-mediated prostaglandin E2 loading into intracellular acidic compartments of macrophages contributes to exocytotic secretion. Biochem. Pharmacol. 98, 629–638 (2015). · DOI
- Sabirov, R. Z. et al. The organic anion transporter SLCO2A1 constitutes the core component of the Maxi-Cl channel. EMBO J. 36, 3309–3324 (2017). · DOI
- Nakanishi, T. et al. Prostaglandin transporter (PGT/SLCO2A1) protects the lung from bleomycin-induced fibrosis. PLoS ONE 10, e0123895 (2015). · DOI
- Chang, H.-Y., Locker, J., Lu, R. & Schuster, V. L. Failure of post-natal ductus arteriosus closure in prostaglandin transporter-deficient mice. Circulation 121, 529–536 (2010). · DOI
- Kasai, T. et al. Role of OATP2A1 in PGE2 secretion from human colorectal cancer cells via exocytosis in response to oxidative stress. Exp. Cell Res. 341, 123–131 (2016). · DOI
- Zhang, Z. et al. Exome sequencing identifies SLCO2A1 mutations as a cause of primary hypertrophic osteoarthropathy. Am. J. Hum. Genet. 90, 125–132 (2012). · DOI
- Diggle, C. P. et al. Prostaglandin transporter mutations cause pachydermoperiostosis with myelofibrosis. Hum. Mutat. 33, 1175–1181 (2012). · DOI
- Busch, J. et al. Mutations in the prostaglandin transporter SLCO2A1 cause primary hypertrophic osteoarthropathy with digital clubbing. J. Investig. Dermatol. 132, 2473–2476 (2012). · DOI
- Sasaki, T. et al. Identification of mutations in the prostaglandin transporter gene SLCO2A1 and its phenotype–genotype correlation in Japanese patients with pachydermoperiostosis. J. Dermatol. Sci. 68, 36–44 (2012). · DOI
- Umeno, J. et al. A hereditary enteropathy caused by mutations in the SLCO2A1 gene, encoding a prostaglandin transporter. PLoS Genet. 11, e1005581 (2015). · DOI
- Umeno, J. et al. Clinical features of chronic enteropathy associated with SLCO2A1 gene: a new entity clinically distinct from Crohn’s disease. J. Gastroenterol. 53, 907–915 (2018). · DOI
- Hamon, A. et al. Crohn-like disease affecting small bowel due to monogenic SLCO2A1 mutations: first cases of chronic enteropathy associated with SLCO2A1 gene [CEAS] in France. J. Crohns Colitis 17, 816–820 (2023). · DOI
- Chi, Y. et al. Inhibition of the prostaglandin transporter PGT lowers blood pressure in hypertensive rats and mice. PLoS ONE 10, e0131735 (2015). · DOI
- Liu, Z., Benard, O., Syeda, M. M., Schuster, V. L. & Chi, Y. Inhibition of prostaglandin transporter (PGT) promotes perfusion and vascularization and accelerates wound healing in non-diabetic and diabetic rats. PloS ONE 10, e0133615 (2015). · DOI
- Inagaki, M. et al. Contribution of prostaglandin transporter OATP2A1/SLCO2A1 to placenta-to-maternal hormone signaling and labor induction. iScience 23, 101098 (2020). · DOI
- Yerushalmi, G. M. et al. The prostaglandin transporter (PGT) as a potential mediator of ovulation. Sci. Transl. Med. 8, 338ra68–338ra68 (2016). · DOI
- Nakamura, Y., Aizawa, C., Kawata, H. & Nakanishi, T. N-glycosylation modifies prostaglandin E2 uptake by reducing cell surface expression of SLCO2A1. Prostaglandins Other Lipid Mediat. 165, 106714 (2023). · DOI
- Wood, C. A. P. et al. Structure and mechanism of blood–brain-barrier lipid transporter MFSD2A. Nature 596, 444–448 (2021). · DOI
- Cater, R. J. et al. Structural basis of omega-3 fatty acid transport across the blood–brain barrier. Nature 595, 315–319 (2021). · DOI
- Nguyen, C. et al. Lipid flipping in the omega-3 fatty-acid transporter. Nat. Commun. 14, 2571 (2023). · DOI
- Khanppnavar, B. et al. Structural basis of organic cation transporter-3 inhibition. Nat. Commun. 13, 6714 (2022). · DOI · Paper page
- Suo, Y. et al. Molecular basis of polyspecific drug and xenobiotic recognition by OCT1 and OCT2. Nat. Struct. Mol. Biol. 30, 1001–1011 (2023). · DOI
- Schlott, B. et al. Interaction of Kazal-type inhibitor domains with serine proteinases: biochemical and structural studies. J. Mol. Biol. 318, 533–546 (2002). · DOI
- Hänggi, E., Grundschober, A. F., Leuthold, S., Meier, P. J. & St-Pierre, M. V. Functional analysis of the extracellular cysteine residues in the human organic anion transporting polypeptide, OATP2B1. Mol. Pharmacol. 70, 806–817 (2006). · DOI
- Huang, Y. et al. Structural basis for substrate and inhibitor recognition of human multidrug transporter MRP4. Commun. Biol. 6, 1–11 (2023). · DOI
- Pourmal, S. et al. Structural basis of prostaglandin efflux by MRP4. Nat. Struct. Mol. Biol. 31, 621–632 (2024). · DOI · Paper page
- Bloch, M., Raj, I., Pape, T. & Taylor, N. M. I. Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4. Structure 31, 1407–1418.e6 (2023). · DOI · Paper page
- Morimoto, K. et al. Crystal structure of the endogenous agonist-bound prostanoid receptor EP3. Nat. Chem. Biol. 15, 8–10 (2019). · DOI
- Xia, Z. et al. Structure and transport mechanism of the human prostaglandin transporter SLCO2A1. Nat. Commun. 16, 8124 (2025). · DOI
- Chen, H. et al. Structural and functional insights into Spns2-mediated transport of sphingosine-1-phosphate. Cell 186, 2644–2655.e16 (2023). · DOI
- Qu, C. et al. Ligand recognition, unconventional activation, and G protein coupling of the prostaglandin E2 receptor EP2 subtype. Sci. Adv. 7, eabf1268 (2021). · DOI
- Leuthold, S. et al. Mechanisms of pH-gradient driven transport mediated by organic anion polypeptide transporters. Am. J. Physiol. Cell Physiol. 296, C570–C582 (2009). · DOI
- Minor, D. L. Channel surfing uncovers a dual-use transporter. EMBO J. 36, 3272–3273 (2017). · DOI
- Nakamura, Y. et al. Modulation of prostaglandin transport activity of SLCO2A1 by annexin A2 and S100A10. Am. J. Physiol. Cell Physiol. 326, C1042–C1053 (2024). · DOI
- Yu, P., Orlando, M. A. & Orlando, B. J. Structure and post-translational modification of the prostaglandin transporter. Commun. Biol. 8, 1066 (2025). · DOI · Paper page
- Ritchie, T. K. et al. Reconstitution of membrane proteins in phospholipid bilayer nanodiscs. Methods Enzymol. 464, 211–231 (2009). · DOI
- Punjani, A., Rubinstein, J. L., Fleet, D. J. & Brubaker, M. A. cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination. Nat. Methods 14, 290–296 (2017). · DOI · Paper page
- Zivanov, J. et al. New tools for automated high-resolution cryo-EM structure determination in RELION-3. eLife 7, e42166 (2018). · DOI
- Goddard, T. D. et al. UCSF ChimeraX: meeting modern challenges in visualization and analysis. Protein Sci. Publ. Protein Soc. 27, 14–25 (2018). · DOI · Paper page
- Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. Features and development of Coot. Acta Crystallogr. D. Biol. Crystallogr. 66, 486–501 (2010). · DOI · Paper page
- Afonine, P. V. et al. Real-space refinement in PHENIX for cryo-EM and crystallography. Acta Crystallogr. Sect. Struct. Biol. 74, 531–544 (2018). · DOI
- Chen, V. B. et al. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr. D. Biol. Crystallogr. 66, 12–21 (2010). · DOI · Paper page
- Olsson, M. H. M., Søndergaard, C. R., Rostkowski, M. & Jensen, J. H. PROPKA3: consistent treatment of internal and surface residues in empirical pKa predictions. J. Chem. Theory Comput. 7, 525–537 (2011). · DOI
- Wu, E. L. et al. CHARMM-GUI membrane builder toward realistic biological membrane simulations. J. Comput. Chem. 35, 1997–2004 (2014). · DOI
- Huang, J. et al. CHARMM36m: an improved force field for folded and intrinsically disordered proteins. Nat. Methods 14, 71–73 (2017). · DOI
- Yu, W., He, X., Vanommeslaeghe, K. & MacKerell, A. D. Extension of the CHARMM general force field to sulfonyl-containing compounds and its utility in biomolecular simulations. J. Comput. Chem. 33, 2451–2468 (2012). · DOI
- Abraham, M. J. et al. GROMACS: high performance molecular simulations through multi-level parallelism from laptops to supercomputers. SoftwareX 1, 19–25 (2015). · DOI · Paper page
- Steinbach, P. J. & Brooks, B. R. New spherical-cutoff methods for long-range forces in macromolecular simulation. J. Comput. Chem. 15, 667–683 (1994). · DOI
- Hess, B. P-LINCS: a parallel linear constraint solver for molecular simulation. J. Chem. Theory Comput. 4, 116–122 (2008). · DOI
- Bussi, G., Donadio, D. & Parrinello, M. Canonical sampling through velocity rescaling. J. Chem. Phys. 126, 014101 (2007). · DOI
- Parrinello, M. & Rahman, A. Polymorphic transitions in single crystals: a new molecular dynamics method. J. Appl. Phys. 52, 7182–7190 (1981). · DOI
Metadata
- Authors
- Zhu, Z., Li, Y., Xia, H., Yang, C., Zhou, Z., Chao, Y., Ba, Q., Li, D., & Qu, Q.
- Affiliations
- Shanghai Medical College of Fudan University (CN)
- Chinese Academy of Sciences (CN)
- Shanghai University of Traditional Chinese Medicine (CN)
- Sun Yat-sen University (CN)
- Corresponding author
- Li, Yaohui
- Ba, Qian
- Li, Dianfan
- Qu, Qianhui
- Venue
- Nature Communications
- Published
- 2025-12-01
- Volume
- 17
- Issue
- 1
- Pages
- 315-315
- ISSN
- 2041-1723 (ISSN-L)
- PMC
- PMC12789631
- OpenAlex
- W4416850979
- Cited by
- 2
- References
- 1
- Citations by year
- 2026: 1 · 2025: 1
- FWCI
- 0.83
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Nature Communications (publishedVersion, cc-by-nc-nd)
- Research Square (acceptedVersion, cc-by)
- PubMed (publishedVersion)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- National Natural Science Foundation of China (32171194)
- Topics
- Health Sciences › Medicine › Oncology › Drug Transport and Resistance Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Receptor Mechanisms and Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
- Keywords
- prostaglandin E2, organic anion transporters, major facilitator superfamily, substrate recognition, lipid nanodiscs, detergent micelles
- MeSH terms
- Protein Domains, Biological Transport, Humans, Models, Molecular, Dinoprostone, Crystallography, X-Ray, Organic Anion Transporters, Protein Multimerization, HEK293 Cells
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