Histone post-translational modifications - cause and consequence of genome function

The hallmarks of cancer

Hanahan, D., & Weinberg, R. A. (2000) · Cell · doi:10.1016/s0092-8674(00)81683-9 · Cited by 29,219

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

Lieberman-Aiden, E., van Berkum, N. L., Williams, L., Imakaev, M., Ragoczy, T., Telling, A., Amit, I., Lajoie, B. R., Sabo, P. J., Dorschner, M. O., et al. (2009) · Science · doi:10.1126/science.1181369 · Cited by 8,898

High-Resolution Profiling of Histone Methylations in the Human Genome

Barski, A., Cuddapah, S., Cui, K., Roh, T.-Y., Schones, D. E., Wang, Z., Wei, G., Chepelev, I., & Zhao, K. (2007) · Cell · doi:10.1016/j.cell.2007.05.009 · Cited by 6,845

Topological domains in mammalian genomes identified by analysis of chromatin interactions

Dixon, J. R., Selvaraj, S., Yue, F., Kim, A., Li, Y., Shen, Y., Hu, M., Liu, J. S., & Ren, B. (2012) · Nature · doi:10.1038/nature11082 · Cited by 6,829

DNA double-stranded breaks induce histone H2AX phosphorylation on serine 139

Rogakou, E. P., Pilch, D. R., Orr, A. H., Ivanova, V. S., & Bonner, W. M. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.10.5858 · Cited by 5,438

Metabolic regulation of gene expression by histone lactylation

Zhang, D., Tang, Z., Huang, H., Zhou, G., Cui, C., Weng, Y., Liu, W., Kim, S., Lee, S., Perez-Neut, M., et al. (2019) · Nature · doi:10.1038/s41586-019-1678-1 · Cited by 4,371

Histone H3K27ac separates active from poised enhancers and predicts developmental state

Creyghton, M. P., Cheng, A. W., Welstead, G. G., Kooistra, T., Carey, B. W., Steine, E. J., Hanna, J., Lodato, M. A., Frampton, G. M., Sharp, P. A., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1016071107 · Cited by 4,302

ZFN, TALEN, and CRISPR/Cas-based methods for genome engineering

Gaj, T., Gersbach, C. A., & Barbas, C. F. (2013) · Trends in Biotechnology · doi:10.1016/j.tibtech.2013.04.004 · Cited by 3,820

Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

Bannister, A. J., Zegerman, P., Partridge, J. F., Miska, E. A., Thomas, J. O., Allshire, R. C., & Kouzarides, T. (2001) · Nature · doi:10.1038/35065138 · Cited by 2,903

Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

Lachner, M., O'Carroll, D., Rea, S., Mechtler, K., & Jenuwein, T. (2001) · Nature · doi:10.1038/35065132 · Cited by 2,868

Phylogenomic analysis of bromodomain genes in cotton (Gossypium spp.) and their potential roles in abiotic stress tolerance

Tayyab, M., Taj, M. H., Ahmad, A., Rana, F. R., Shahzaib, M., Atif, R. M., Azhar, M. T., Khan, S. H., Mian, I. A., He, S., et al. (2025) · Journal of Cotton Research · doi:10.1186/s42397-025-00225-1 · Cited by 1

Cis- and trans-regulation of Irf8 enhancers during dendritic cell development

Nishiyama, A., & Tamura, T. (2025) · Experimental Hematology · doi:10.1016/j.exphem.2025.104858 · Cited by 1

Comparative analysis of differentially acetylated proteins between Antarctic white‐blooded Chionodraco hamatus and red‐blooded Trematomus bernacchii

Jia, R., Zhai, W., Huang, S., Chen, B., Hu, R., Jiang, S., & Xu, Q. (2025) · Journal of Fish Biology · doi:10.1111/jfb.70203 · Cited by 1

iNOME-seq: in vivo simultaneous genome-wide mapping of chromatin accessibility, nucleosome positioning, DNA-binding protein sites, and DNA methylation in Arabidopsis

Hussain, N., Merritt, R., Engelhorn, J., Antúnez-Sánchez, J., Wibowo, A. T., Latrasse, D., Wrightsman, T., Collenberg, M., Bezrukov, I., Alotaibi, H., et al. (2025) · Genome biology · doi:10.1186/s13059-025-03760-x · Cited by 1

Theoretical analysis of confinement mechanisms for epigenetic modifications of nucleosomesPreprint

Nickels, J. F., & Sneppen, K. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.12.20.521095 · Cited by 1

Epigenetic coordination of transcriptional and translational programs in hypoxiaPreprint

Watt, K., Dauber, B., Szkop, K. J., Lee, L. J., Jovanović, P., Chen, S., Palia, R., Vassalakis, J. A., Cooper, T. T., Papadopoli, D., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.09.16.558067 · Cited by 1

Capturing Histone Tails Motion using all-atom Replica-Exchange with Solute Tempering (REST2) SimulationsPreprint

Gillet, N., Allahkaram, L., & Dumont, E. E. (2023) · ChemRxiv · doi:10.26434/chemrxiv-2023-n79z2 · Cited by 1

Predicting the effect of CRISPR-Cas9-based epigenome editingPreprint

Batra, S. S., Cabrera, A., Spence, J. P., Hilton, I. B., & Song, Y. S. (2023) · eLife · doi:10.7554/elife.92991.1 · Cited by 1

Acute multi-level response to defective de novo chromatin assembly in S-phasePreprint

Dreyer, J., Ricci, G., van den Berg, J., Bhardwaj, V., Funk, J., Armstrong, C., van Batenburg, V., Sine, C. C., VanInsberghe, M. A., Marsman, R., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.03.22.586291 · Cited by 1

Will Liquid Biopsy Deliver the Expected Breakthrough in Clinical Oncology? Contribution of Mass Spectrometry-Based ProteomicsPreprint

Traldi, P., Agostini, M., & Hamdan, M. H. (2024) · Preprints.org · doi:10.20944/preprints202403.1312.v1

High-Resolution Multimodal Profiling of Human Epileptic Brain Activity via Explanted Depth ElectrodesPreprint

Dwiwedi, A. K., Mahesh, A., Sanfeliu, A., Larkin, J., Siwicki, R. A., Sweeney, K. J., O’Brien, D. F., Widdess‐Walsh, P., Picelli, S., Henshall, D. C., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.07.03.601925 · Cited by 1

ESRP2-microRNA-122 axis directs the postnatal onset of liver polyploidization and maturationPreprint

Bangru, S., Chen, J., Baker, N., Das, D., Chembazhi, U. V., Derham, J. M., Chorghade, S., Arif, W., Alencastro, F., Duncan, A. W., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.07.06.602336 · Cited by 1

Plant BCL-Domain Homologues play a conserved role in SWI/SNF complex stabilityPreprint

Candela-Ferre, J., Pérez-Alemany, J., Diego‐Martin, B., Pandey, V., Wohlschlegel, J. A., Lozano‐Juste, J., & Gallego‐Bartolomé, J. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.09.17.612632 · Cited by 1

The evolution and developmental dynamics of histone-based chromatin regulation in AnnelidaPreprint

Martín-Zamora, F. M., Cole, J., Donnellan, R. D., Guynes, K., Carrillo‐Baltodano, A. M., Dickman, M. J., Hurd, P. J., & Martín-Durán, J. M. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.09.20.614060 · Cited by 1

Nicotinylation is a histone mark generated from the nicotinic acid metabolite nicotinyl-CoAPreprint

Zhang, H., Jiang, Y., Li, Y., Zhang, L., Yan, H., Qin, Z., Li, Q., Peng, Y., Liu, J., Weng, Y., et al. (2024) · Research Square · doi:10.21203/rs.3.rs-4384441/v1 · Cited by 2

Epigenome profiling identifies H3K27me3 regulation of extra-cellular matrix composition in human corticogenesisPreprint

Ditzer, N., Senoglu, E., Schütze, T. M., Nikolaidi, A., Kolodziejczyk, A., Sameith, K., Dietz, S., Derihaci, R. P., Birdir, C., Eugster, A., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.10.01.616076 · Cited by 2

A dynamic histone-based chromatin regulatory toolkit underpins genome and developmental evolution in an invertebrate cladePreprint

Martín-Zamora, F. M., Cole, J., Donnellan, R. D., Guynes, K., Carrillo‐Baltodano, A. M., Dickman, M. J., Hurd, P. J., & Martín-Durán, J. M. (2024) · Research Square · doi:10.21203/rs.3.rs-5284446/v1 · Cited by 2

Editorial: Epigenetic regulation of genome integrity and its implications in human diseases

Li, Z., Chen, X., & Chen, C.-L. (2024) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2024.1535839 · Cited by 1

G-Quadruplex-Protein Interactome at Human Gene PromotersPreprint

Duan, R.-F., Zheng, J., Hao, Y., & Tan, Z. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.01.01.630896 · Cited by 1

Tracking mobilization uncovers an evolutionarily conserved mechanism in suppressing transpositions during somatic developmentPreprint

Luo, Y. N., Liang, Y., Wu, S., Deng, Y., Wu, W., Zhang, Z. Z., Wu, W., & Wang, L. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.02.07.636160 · Cited by 1

Histones in Neutrophil Extracellular Traps (Nets) Contain Oxidative Post-Translational Modifications Induced by the Myeloperoxidase Oxidant Hypochlorous AcidPreprint

Hemmling, H., Hallberg, L. A. E., Hägglund, P., & Hawkins, C. L. (2025) · SSRN Electronic Journal · doi:10.2139/ssrn.5138030 · Cited by 1

ALFIN-LIKE Proteins Orchestrate H3K4me3-H3K27me3 Crosstalk to Regulate Plant EmbryogenesisPreprint

Scotton, J., Fu, Y., Tourdot, É., Schmid, M. W., & Simonini, S. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.04.08.647773 · Cited by 1

Targeting SLC7A11-mediated cysteine metabolism for the treatment of trastuzumab resistant HER2 positive breast cancerPreprint

Hua, Y., Duan, N., Sun, C., Yang, F., Tian, M., Sun, Y., Zhao, S., Gong, J., Liu, Q., Huang, X., et al. (2025) · eLife · doi:10.7554/elife.103953.2 · Cited by 1

PLAMseq enables the proteo-genomic characterization of chromatin-associated proteins and protein interactions in a single experimental workflowPreprint

González-Vinceiro, L., Espejo-Serrano, C., Soler-Oliva, M. E., Mateos‐Martín, M. L., Rico, D., González‐Aguilera, C., & González‐Prieto, R. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.04.27.650851 · Cited by 1

1,25(OH)2D3/VDR Alleviates Cuprotosis of Pancreatic β Cells by Mediating Histone LactylationPreprint

Yuan, Q., Li, Y., Zheng, W., Liu, Y., & Mao, L. (2025) · Preprints.org · doi:10.20944/preprints202506.1948.v1 · Cited by 1

RIF1 orchestrates a multi-step restoration of post-replicative H3K9me3Preprint

Chen, N., Bandau, S., Kumari, R. R. N. P., Prevo, B., Sasaki, T., Webb, S., Sanzo, S. D., Shapira, D., Voelker-Albert, M., Gilbert, D. M., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.07.14.664777 · Cited by 1

SET1/MLL complexes control transcription independently of H3K4me3Preprint

Au, H. Y. A., Szczurek, A., de Krijger, I., Kjelstrup-Osorio, N., Hughes, A. L., Lastuvkova, A., Vermeulen, M., & Klose, R. J. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2025.12.08.692985 · Cited by 2

Comparative modes of chromatin engagement by PAX::FOXO1 fusions in rhabdomyosarcomaPreprint

Tallan, A. M., Kucinski, J. P., Vontell, A. M., Karunanayake, C., Hoffman, R. A., Sunkel, B. D., Taslim, C., Kendall, G. C., & Stanton, B. Z. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.02.18.706582 · Cited by 1

Rewiring Oncogenic Transcriptional Complexes with Domain-ALTerAtion Chimeras (DALTACs) in Prostate CancerPreprint

Luo, J., Yang, J., Tien, J. C.-Y., Wang, M., Das, S., Wang, X., Young, E., Tošović, J., Mannan, R., Xiang, W., et al. (2026) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2026.04.24.720638 · Cited by 1

Identifying New Regulators of Evolutionarily Conserved Differential Chromosome X Dosage CompensationPreprint

Guo, M., Fang, Z., Chen, B., Songyang, Z., & Xiong, Y. (2022) · SSRN Electronic Journal · doi:10.2139/ssrn.4178545

Multivariate analyses of polygenic risk for impulsivity and alcohol use: a study of longitudinal trajectories of binge drinking in emerging adulthood

Miller, A. P. (2022) · MOspace Institutional Repository (University of Missouri) · doi:10.32469/10355/94082

CENPA facilitates hepatocellular carcinoma proliferation by cooperating with YY1 to drive transcription of CCND1 and NRP2.Preprint

Liao, J., Chen, Z., Chang, R., Yuan, T., Li, G., Zhu, C., Wen, J., Wei, Y., Huang, Z., Ding, Z., et al. (2023) · Research Square · doi:10.21203/rs.3.rs-2630672/v1

Modulating Enzyme’s Activity and Specificity through Pre-Installed Posttranslational Modifications (PTMs) on Substrate: The Role of PTM-induced Substrate-Assisted StimulationPreprint

Guo, H., & Qian, P. (2023) · ChemRxiv · doi:10.26434/chemrxiv-2023-cdqc6

Inflammation induced epigenetic activation of bivalent genes in osteoarthritic cartilagePreprint

Du, H., Zhang, Y., Xi, Y., You, X., Wu, D., Luo, Z., Cai, Y., Lu, H., Liao, Z., Ding, B., et al. (2023) · medRxiv · doi:10.1101/2023.04.13.23288509

Structural Insights into γH2Ax containing NucleosomesPreprint

Panigrahi, R., Edwards, R. A., Islam, M. T., Lu, J., Kulepa, A., Kim, T., & Glover, J. N. M. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.04.30.538894

Genome-wide identification of the histone acetyltransferase gene family in Citrus clementina and its potential roles in citrate metabolismPreprint

Lin, X., Shi, Y., Liu, S.-C., Liu, X., Li, S., & Chen, K. (2023) · Research Square · doi:10.21203/rs.3.rs-2968651/v1

POS0411 PROFILING THE HISTONE LANDSCAPE IN OSTEOARTHRITIS: ENRICHMENT OF HISTONE VARIANT H3.3 AND ITS ASSOCIATED POST-TRANSLATIONAL MODIFICATIONS

Núñez-Carro, C., Calamia, V., Fernández‐Puente, P., Blanco-Blanco, M., Quaranta, P., Hermida‐Gómez, T., Ruíz‐Romero, C., Blanco, F. J., & Andres, M. C. D. (2023) · Annals of the Rheumatic Diseases · doi:10.1136/annrheumdis-2023-eular.2339

Structural and Biochemical Analysis of Histone H3.1 Recognition Mechanisms by TonsukuPreprint

Couture, J., Davarinejad, H., Muñoz, M. A., Joshi, M., Sarvan, S., Ross, A., Brunzelle, J. S., & Alarcon, E. I. (2023) · SSRN Electronic Journal · doi:10.2139/ssrn.4500927

Dependency of 3D chromatin folding on RNA polymerase II at different cell cycle stages

Übelmesser, N. (2023) · eDiss (Georg-August-Universität Göttingen) · doi:10.53846/goediss-9998

CUT&tag: A powerful epigenetic tool for chromatin profilingPreprint

Li, P., fu, Z., Jiang, S., Sun, Y., zheng, S., & Zong, L. (2023) · doi:10.22541/au.169203623.39699591/v1

Advances in Epigenetic Mechanisms and Transgenerational Inheritance of Male Infertility Induced by Exposure to Endocrine-Disrupting Chemicals

Yuan, Y., Wu, P., Yan, Y., Wang, J., Feng, J., Ma, J., Tang, Q., & Wu, W. (2023) · IntechOpen eBooks · doi:10.5772/intechopen.1002416

The role of VRK1 in chromatin remodeling: regulation of histone post-translational modifications and epigenetic enzymes

Monte-Serrano, E. (2023) · Gredos (University of Salamanca) · doi:10.14201/gredos.153146

Unraveling the Role of Transcription Factor SP1 and H3K9 Acetylation in MGMT Regulation and Temozolomide Resistance in Glioblastoma MultiformePreprint

Ye, L., Gu, L., Wang, Y., Xing, H., Hu, P., Wang, Y., & Ma, W. (2023) · Research Square · doi:10.21203/rs.3.rs-3398493/v1

Translational aspects of the endometriosis epigenome

Colón-Caraballo, M., & Flores, I. (2023) · Elsevier eBooks · doi:10.1016/b978-0-443-21863-7.00008-1

An Overview of Epigenetics Modifications in Normal and Cancer Cell

Mäki‐Nevala, S., & Peltomäki, P. (2023) · Epigenetics and human health · doi:10.1007/978-3-031-42365-9_1

eLife Assessment: Predicting the effect of CRISPR-Cas9-based epigenome editing

Khalil, A. S. (2023) · eLife · doi:10.7554/elife.92991.1.sa2

Epigenetyka a ulepszanie roślin użytkowych

Bernacka, K., Achrem, M., & Kalinka, A. (2024) · Postępy Biochemii · doi:10.18388/pb.2021_514

USP3 promotes DNA damage response and chemotherapy resistance through stabilizing and deubiquitinating SMARCA5 in prostate cancerPreprint

xu, S., Li, S., Xiong, S., Li, Z., Yang, L., Yang, H., Xiong, Y., Zhan, X., Dong, Q., Hu, H., et al. (2024) · Research Square · doi:10.21203/rs.3.rs-3828433/v1

miR-203 controls developmental timing and early fate restriction during preimplantation embryogenesisPreprint

González‐Martínez, J., Sánchez-Belmonte, A., Ayala, E., García, A., Nogueira, E., Muñoz, J., Melati, A., Giménez-Llorente, D., Losada, A., Ortega, S., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.02.06.579214

Nicotinic acid suppresses liver cancer metastasis via histone lysine nicotinylationPreprint

Zhang, H., Jiang, Y., Li, Y., Zhang, L., Yan, H., Qin, Z., Li, Q., Peng, Y., Liu, J., Weng, Y., et al. (2024) · Research Square · doi:10.21203/rs.3.rs-3973350/v1

Incorporation of the histone variant H2A.Z counteracts gene silencing mediated by H3K27 trimethylation in Fusarium fujikuroi

Atanasoff-Kardjalieff, A. K., Berger, H., Steinert, K., Janevska, S., Ponts, N., Humpf, H., Kalinina, S. A., & Studt, L. (2024) · Epigenetics & Chromatin · doi:10.1186/s13072-024-00532-y · Cited by 1

Additional file 3 of SENP5 promotes homologous recombination-mediated DNA damage repair in colorectal cancer cells through H2AZ deSUMOylation

Liu, T., Wang, H., Chen, Y., Wan, Z., Du, Z., Shen, H., Yu, Y., Ma, S., Xu, Y., Li, Z., et al. (2023) · Figshare · doi:10.6084/m9.figshare.24113228

The Landscape of Protein Post-Translational Modifications in Hepatocellular CarcinomasPreprint

Zhang, Q., Wang, J., Lou, Y., Peng, X., Ye, M., Cao, W., Wu, J., Yan, Z., Zhao, X., Zhou, Y., et al. (2024) · SSRN Electronic Journal · doi:10.2139/ssrn.4791490

WITHDRAWN: Epigenetic remodeling of the myeloid landscape of the cancer tumor microenvironment

German, B., Petkovich, D. A., & Ellis, L. (2024) · Elsevier eBooks · doi:10.1016/b978-0-443-14064-8.00002-3

CYP19A1 Expression Is Controlled by mRNA Stability of the Upstream Transcription Factor AP-2γ in Placental JEG3 Cells

Kotomura, N., Shimono, Y., & Ishihara, S. (2024) · Endocrinology · doi:10.1210/endocr/bqae055

Probing Class I Histone Deacetylases (Hdac) with Proteolysis Targeting Chimera (Protac) for the Development of Highly Potent and Selective DegradersPreprint

Ibrahim, H. S., Guo, M., Hilscher, S., Erdmann, F., Schmidt, M., Schutkowski, M., Sheng, C., & Sippl, W. (2024) · SSRN Electronic Journal · doi:10.2139/ssrn.4821742

Precision Gene Regulation Exploiting CRISPR-Cas for Targeted Epigenetic Modifications

Al-Abedi, Y. W., Hasan, M. K., Halboti, A. A., Alsaeedi, A. A., & Kadhum, R. A. (2024) · Hosts and Viruses · doi:10.17582/journal.hv/2024/11.27.35

Future Perspectives in the Omics Era for Tea Breeding

Kong, W., & Zhang, X. (2024) · Concepts and strategies in plant sciences · doi:10.1007/978-981-97-0680-8_20

Transcriptome-based analysis reveals chromatin remodeling in post-adult eclosion reconstruction of the insect fat body

Li, Y., Hu, Y., Wang, B., Lang, M., Zhou, S., & Wu, Z. (2024) · Journal of Integrative Agriculture · doi:10.1016/j.jia.2024.06.018

WITHDRAWN: TGFB2-AS1 binding to MED1 promotes doxorubicin-induced cardiomyocyte apoptosis via BMP7 pathwayPreprint

Gao, H., Lan, K., Peng, F., Lian, X., Li, J., Zhou, L., & Gong, H. (2024) · Research Square · doi:10.21203/rs.3.rs-4616701/v1

Initial Characterization of WDR5B Reveals a Role in the Proliferation of Retinal Pigment Epithelial Cells

Bailey, J., Ma, D., & Clegg, D. (2024) · Cells · doi:10.3390/cells13141189 · Cited by 1

Epigenetics in personalized toxicity

Corveleyn, L., Verhelst, S., Deforce, D. L. D., & Dhaenens, M. (2024) · Elsevier eBooks · doi:10.1016/b978-0-443-23802-4.00022-3

PRMT7 mediated PTEN activation promotes bone formation in female micePreprint

Zhang, Y., Qing, J., Yang, L., Gao, X., Lu, D., Wang, Y., Gu, L., Zhang, H., Li, Z., Wang, X., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.07.31.605998

Biased recruitment of H3.3 by HIRA is dictated by de-/acetylation and determines transcription memory and responsePreprint

Satheesan, S. U., Chakrabarti, S., Fulzele, A., Marcellin, M., Locard‐Paulet, M., de Peredo, A. G., & Kolthur‐Seetharam, U. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.08.07.606949

Breaking the epigenetic code with MARCS: the Modification Atlas of Regulation by Chromatin States

Tvardovskiy, A., Lukauskas, S., & Bartke, T. (2024) · Epigenomics · doi:10.1080/17501911.2024.2387527

Epigenetic remodeling of the myeloid landscape of the cancer tumor microenvironment

German, B., Petkovich, D. A., & Ellis, L. (2024) · Elsevier eBooks · doi:10.1016/b978-0-443-14064-8.90002-x

Unveiling Histone Proteoforms using 2D-TAU Gel Electrophoresis

Chimia, M. L., Fontana, C., Cosentino, A., Bruno, C., Iacopetta, D., & Scumaci, D. (2024) · Journal of Visualized Experiments · doi:10.3791/67321

Differential Regulation of Large-scale Chromosome Conformations in Osteoblasts and OsteosarcomaPreprint

Bisht, M., Chung, Y.-C., He, S.-L., Willey, S., Sunkel, B. D., Wang, M., Stanton, B. Z., & Tu, L. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.11.01.621571

A Method for Characterizing Protein-Histone Peptide Interactions In Vitro

Jourdain, C., Eichstädt, B., & Schubert, D. S. P. (2024) · Methods in molecular biology · doi:10.1007/978-1-0716-4228-3_10

An epigenetic perspective of viral diseases, including cancer and autophagy

Patra, S. K. (2025) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2025.167664

Targeting SLC7A11-mediated cysteine metabolism for the treatment of trastuzumab resistant HER2 positive breast cancerPreprint

Hua, Y., Duan, N., Sun, C., Yang, F., Tian, M., Sun, Y., Zhao, S., Gong, J., Liu, Q., Huang, X., et al. (2025) · eLife · doi:10.7554/elife.103953.1

Visualization of H3K9me3 in Embryoid Bodies Using Genetically Encoded Fluorescent Sensor MPP8-Green

Stepanov, A. I., Zhigmitova, E. B., Dashinimaev, E. B., Galiakberova, A. A., Putlyaeva, L. V., Lukyanov, K. A., & Gurskaya, N. G. (2025) · Russian Journal of Bioorganic Chemistry · doi:10.1134/s1068162025010236

Live-Cell Visualization of Histone Modification Using Bimolecular Complementation

Stepanov, A. I., Putlyaeva, L. V., Shuvaeva, A. A., Andrushkin, M. A., Baranov, M. S., Gurskaya, N. G., & Lukyanov, K. A. (2025) · Russian Journal of Bioorganic Chemistry · doi:10.1134/s1068162025010261

Unraveling the interplay of genetic variants and epigenetic signatures in complex traits

Franco‐Gedda, L. P., Heidor, R., & Horst, M. A. (2025) · Advances in genetics · doi:10.1016/bs.adgen.2025.02.004

Stress during puberty and adulthood pregnancy impact histone acetylation regulators in the hypothalamus

Luther, L. A. M., Higley, S. L., & Morrison, K. E. (2024) · Neuroscience · doi:10.1016/j.neuroscience.2025.03.058

Epigenetics and Chromatin Remodeling

Kinyamu, H. K., Theofilatos, D., Mackey, L. C., & Archer, T. (2025) · Elsevier eBooks · doi:10.1016/b978-0-323-95488-4.00260-6

Deletion of the Class 1 Histone Deacetylase PsHos2 Induces Secondary Metabolic Perturbations in the Sea Cucumber-Associated Penicillium sclerotiorum

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