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NR4A transcription factors limit CAR T cell function in solid tumours
Open accessAbstract
T cells expressing chimeric antigen receptors (CAR T cells) targeting human CD19 (hCD19) have shown clinical efficacy against B cell malignancies 1,2. CAR T cells have been less effective against solid tumours 3-5, in part because they enter a hyporesponsive ('exhausted' or 'dysfunctional') state 6-9 triggered by chronic antigen stimulation and characterized by upregulation of inhibitory receptors and loss of effector function. To investigate the function of CAR T cells in solid tumours, we transferred hCD19-reactive CAR T cells into hCD19+ tumour-bearing mice. CD8+CAR+ tumour-infiltrating lymphocytes and CD8+ endogenous tumour-infiltrating lymphocytes expressing the inhibitory receptors PD-1 and TIM3 exhibited similar profiles of gene expression and chromatin accessibility, associated with secondary activation of nuclear receptor transcription factors NR4A1 (also known as NUR77), NR4A2 (NURR1) and NR4A3 (NOR1) by the initiating transcription factor NFAT (nuclear factor of activated T cells)10-12. CD8+ T cells from humans with cancer or chronic viral infections 13-15 expressed high levels of NR4A transcription factors and displayed enrichment of NR4A-binding motifs in accessible chromatin regions. CAR T cells lacking all three NR4A transcription factors (Nr4a triple knockout) promoted tumour regression and prolonged the survival of tumour-bearing mice. Nr4a triple knockout CAR tumour-infiltrating lymphocytes displayed phenotypes and gene expression profiles characteristic of CD8+ effector T cells, and chromatin regions uniquely accessible in Nr4a triple knockout CAR tumour-infiltrating lymphocytes compared to wild type were enriched for binding motifs for NF-κB and AP-1, transcription factors involved in activation of T cells. We identify NR4A transcription factors as having an important role in the cell-intrinsic program of T cell hyporesponsiveness and point to NR4A inhibition as a promising strategy for cancer immunotherapy.
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“Because Nr4a2 is highly related to Nr4a1 and has been found to promote T cell exhaustion (33-35),”
From Bile acid synthesis impedes tumor-specific T cell responses during liver cancer (2025) · cites this paper as [34]
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“T cell exhaustion also limits the efficacy of chimeric antigen receptor (CAR) T cell therapy against solid tumours14–17.”
From Proteotoxic stress response drives T cell exhaustion and immune evasion (2025) · cites this paper as [15]
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“NFAT-induced transcription factors, including NR4A and TOX, drive T cell exhaustion/dysfunction44–47.”
From Tumor-specific cholinergic CD4+ T lymphocytes guide immunosurveillance of hepatocellular carcinoma (2023) · cites this paper as [44]
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Bis-indole-derived NR4A1 antagonists inhibit colon tumor and splenic growth and T-cell exhaustion
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CRISPR/Cas9 technology: towards a new generation of improved CAR-T cells for anticancer therapies
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Advances and challenges in CAR-T cell therapy for head and neck squamous cell carcinoma
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“Ultimately, this approach could lead to better therapeutic outcomes by preventing premature T-cell exhaustion in the harsh TME [156].”
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Eggert, J., & Au‐Yeung, B. B. (2021) · Current Opinion in Immunology · doi:10.1016/j.coi.2021.09.007 · Cited by 20
Sarén, T., Ramachandran, M., Gammelgård, G., Lövgren, T., Mirabello, C., Björklund, Å. K., Wikstrom, K. I., Hashemi, J., Freyhult, E., Ahlström, H. K., et al. (2023) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-23-0178 · Cited by 19
“S8A–S8C) that expressed genes associated with dysfunction NR4A1, NR4A2, and NR4A3 (38, 39), functional exhaustion markers ENTPD1 and TIGIT (31, 40) and immune checkpoint CTLA4 (Fig.”
BackgroundRyu, H., Bi, T., Pulliam, T. H., Sarkar, K., Church, C. D., Kumar, N., Mayer-Blackwell, K., Jani, S., Ramchurren, N., Hansen, U. K., et al. (2024) · Cell Reports Medicine · doi:10.1016/j.xcrm.2023.101390 · Cited by 20
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Hosen, N. (2019) · Cancers · doi:10.3390/cancers11122024 · Cited by 23
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“increased CD8+ T cell effector functions and induced tumor regression [43].”
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“In addition, other cytokine gene loci, such as Il21 and Tnfa, showed enrichment for Nur77 without a direct Nur77-binding motif, suggesting that Nur77 can induce the expression of negative regulators of cytokine genes and thereby control T cell responsiveness (24, 26, 71).”
BackgroundWang, H., Tang, L. Y., Kong, Y., Liu, W., Zhu, X., & You, Y. H. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24119115 · Cited by 19
“NR4A-knockout CAR-Ts enhanced anti-tumor function, promoted tumor reduction in vitro [4,25].”
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How Can We Engineer CAR T Cells to Overcome Resistance?
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“97 Engineering CAR T cells to overexpress c-Jun shifts the balance in favour of the formation of proinflammatory c-Jun/c-Fos heterodimers, resulting in reduced terminal differentiation, increased expansion and improved anti-tumour responses against both solid tumour and leukemic xenograft models.97 NFAT is a transcrip…”
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“…which is associated with a progenitor exhausted cell population that retains anti-tumor functionality and is responsive to checkpoint blockade (Chen et al., 2019c; Im et al., 2016; Jadhav et al., 2019; Utzschneider et al., 2016), was similar in both Always ON and RestedD7-11 conditions and…”
BackgroundInfluentialImmune Dysregulation in Chronic Obstructive Pulmonary Disease
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“…regulator in the nucleus and is involved in a variety of biological processes including inflammation, cell proliferation, and apoptosis (J. Chen et al., 2019), cigarette smoke extracts (CSE) increased the overall expression of Nur77 in airway epithelial cells, translocated Nur77 to the…”
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“Chen et al. demonstrated that the combination of CAR-T therapy with blockade of NR4A2 stimulates a more robust T cell response and improves the efficacy of the treatment [129].”
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Self-citationResistance and recurrence of malignancies after CAR-T cell therapy
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The TOX subfamily: all-round players in the immune system
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Application of ATAC-seq in tumor-specific T cell exhaustion
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“The NR4A family members NR4A1 and NR4A2 are up-regulated in CD8+ TILs of human melanoma and metastatic melanoma [30, 81–83].”
BackgroundInfluentialJiménez-Fernández, M., Rodrı́guez, C., Cañes, L., Ballester‐Servera, C., Vara, A., Requena, S., de la Fuente, H., Martínez‐González, J., & Sánchez‐Madrid, F. (2022) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-022-04481-1 · Cited by 18
Construction of CAR-T cells targeting TM4SF1 and its anti-tumor capacity in ovarian cancer
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The transcription factor IRF4 determines the anti-tumor immunity of CD8+ T cells
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Strategies to Overcome Hurdles in Cancer Immunotherapy
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“This panel exemplifies the advancements in CAR T therapy aimed at enhancing specificity, efficacy, and long-term immune memory in cancer treatment. thereby strengthening their persistence and functional capabilities [33–35].”
Self-citationNew targets and technologies for CAR-T cells
Freitag, F., Maucher, M., Riester, Z., & Hudecek, M. (2020) · Current Opinion in Oncology · doi:10.1097/cco.0000000000000653 · Cited by 20
Improving CAR T-cells: The next generation
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Chimeric Antigen Receptor T Cell Exhaustion during Treatment for Hematological Malignancies
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“Recent studies showed that NR4A-knockout CAR-T cells had low expression of inhibitory receptors and reduced tumor growth [77].”
Background
Metadata
- Authors
- Chen, J., López-Moyado, I. F., Seo, H., Lio, C.-W. J., Hempleman, L. J., Sekiya, T., Yoshimura, A., Scott-Browne, J. P., & Rao, A.
- Affiliations
- La Jolla Institute for Immunology (US)
- National Center for Global Health and Medicine (JP)
- Keio University (JP)
- Corresponding author
- Chen, Joyce
- Scott-Browne, James P.
- Rao, Anjana
- ORCID
- Venue
- Nature
- Published
- 2019-02-27
- Volume
- 567
- Issue
- 7749
- Pages
- 530-534
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC6546093
- OpenAlex
- W2917547201
- Cited by
- 874
- References
- 47
- Citations by year
- 2026: 136 · 2025: 127 · 2024: 122 · 2023: 134 · 2022: 101 · 2021: 121 · 2020: 93 · 2019: 40
- FWCI
- 37.10
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- Seoul National University Open Repository (Seoul National University) (submittedVersion)
- Funders
- National Institutes of Health (1s10od016262-01)
- Japan Society for the Promotion of Science (18H02673, 19H04822, 16KT0114, 17H06175, 16K15292)
- National Institute of General Medical Sciences (T32GM007752)
- National Institute of Allergy and Infectious Diseases (R01AI109842, R01AI048213, R56AI109842, R01AI040127)
- National Institute of Dental and Craniofacial Research (U01DE028227)
- National Center for Research Resources (S10RR027366)
- Topics
- Health Sciences › Medicine › Oncology › CAR-T cell therapy research
- Health Sciences › Medicine › Oncology › Cancer Immunotherapy and Biomarkers
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Nuclear Receptors and Signaling
- Keywords
- Nur77, Nurr1, NOR-1, chimeric antigen receptor T cells, CD19, T cell exhaustion, solid tumors, chromatin accessibility, NFAT, PD-1, TIM-3, tumor-infiltrating lymphocytes, effector T cells, cancer immunotherapy, transcriptional reprogramming
- MeSH terms
- Receptors, Chimeric Antigen, Animals, Chromatin, DNA-Binding Proteins, Female, Humans, Male, Melanoma, Experimental, Mice, Inbred C57BL, Neoplasms, Receptors, Steroid, Receptors, Thyroid Hormone, Transcription Factors, Survival Rate, Lymphocytes, Tumor-Infiltrating, NF-kappa B, CD8-Positive T-Lymphocytes, Transcription Factor AP-1, Antigens, CD19, Adoptive Transfer, Gene Expression Profiling, Cell Line, Tumor, Mice, Nuclear Receptor Subfamily 4, Group A, Member 1, Nuclear Receptor Subfamily 4, Group A, Member 2
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