The DOI matches its Crossref record; 4 of the 4 references it cites were found in a registry or an index.
Synthesis of three advanced biofuels from ionic liquid-pretreated switchgrass using engineered Escherichia coli
Open accessAbstract
One approach to reducing the costs of advanced biofuel production from cellulosic biomass is to engineer a single microorganism to both digest plant biomass and produce hydrocarbons that have the properties of petrochemical fuels. Such an organism would require pathways for hydrocarbon production and the capacity to secrete sufficient enzymes to efficiently hydrolyze cellulose and hemicellulose. To demonstrate how one might engineer and coordinate all of the necessary components for a biomass-degrading, hydrocarbon-producing microorganism, we engineered a microorganism naïve to both processes, Escherichia coli , to grow using both the cellulose and hemicellulose fractions of several types of plant biomass pretreated with ionic liquids. Our engineered strains express cellulase, xylanase, beta-glucosidase, and xylobiosidase enzymes under control of native E. coli promoters selected to optimize growth on model cellulosic and hemicellulosic substrates. Furthermore, our strains grow using either the cellulose or hemicellulose components of ionic liquid-pretreated biomass or on both components when combined as a coculture. Both cellulolytic and hemicellulolytic strains were further engineered with three biofuel synthesis pathways to demonstrate the production of fuel substitutes or precursors suitable for gasoline, diesel, and jet engines directly from ionic liquid-treated switchgrass without externally supplied hydrolase enzymes. This demonstration represents a major advance toward realizing a consolidated bioprocess. With improvements in both biofuel synthesis pathways and biomass digestion capabilities, our approach could provide an economical route to production of advanced biofuels.
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Alvira, P., Tomás-Pejó, E., Ballesteros, M., & Negro, M. J. (2010) · Bioresource Technology · doi:10.1016/j.biortech.2009.11.093 · Cited by 3,912 · cited 2×
“IL pretreatment of plant biomass is a promising approach for enabling efficient biomass conversion (20).”
BackgroundNon-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels
Atsumi, S., Hanai, T., & Liao, J. C. (2008) · Nature · doi:10.1038/nature06450 · Cited by 1,945
Beneficial biofuels—the food, energy, and environment trilemma
Tilman, D., Socolow, R., Foley, J. A., Hill, J., Larson, E., Lynd, L., Pacala, S., Reilly, J., Searchinger, T., Somerville, C., et al. (2009) · Science · doi:10.1126/science.1177970 · Cited by 1,596
EcoCyc: A comprehensive view of Escherichia coli biology
Keseler, I. M., Bonavides-Martinez, C., Collado-Vides, J., Gama-Castro, S., Gunsalus, R. P., Johnson, D. A., Krummenacker, M., Nolan, L. M., Paley, S., Paulsen, I. T., et al. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkn751 · Cited by 373 · cited 2×
“Reasoning that expression of biomass-consumption pathways should be limited to periods when E. coli is starved of carbon (for instance, when the cells are freshly inoculated into biomass-containing medium from a glucose-based seed culture), we screened several promoters that have been shown to increase in transcriptio…”
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Cited by
ePathBrick: A Synthetic Biology Platform for Engineering Metabolic Pathways in E. coli
Xu, P., Vansiri, A., Bhan, N., & Koffas, M. A. G. (2012) · ACS Synthetic Biology · doi:10.1021/sb300016b · Cited by 255
Salehi Jouzani, G., & Taherzadeh, M. J. (2015) · Biofuel Research Journal · doi:10.18331/brj2015.2.1.4 · Cited by 224
Isoprenoid drugs, biofuels, and Chemicals–Artemisinin, farnesene, and beyond
George, K. W., Alonso-Gutierrez, J., Keasling, J. D., & Lee, T. S. (2015) · Advances in biochemical engineering, biotechnology · doi:10.1007/10_2014_288 · Cited by 185
Self-citationRecent advances in biofuel production through metabolic engineering
Joshi, S., & Mishra, S. (2022) · Bioresource Technology · doi:10.1016/j.biortech.2022.127037 · Cited by 87
Lyu, X., Nuhu, M., Candry, P., Wolfanger, J., Betenbaugh, M., Saldivar, A., Zuniga, C., Wang, Y., & Shrestha, S. (2024) · Journal of Industrial Microbiology and Biotechnology · doi:10.1093/jimb/kuae025 · Cited by 53
Metadata
- Authors
- Bokinsky, G., Peralta-Yahya, P. P., George, A., Holmes, B. M., Steen, E. J., Dietrich, J., Soon Lee, T., Tullman-Ercek, D., Voigt, C. A., Simmons, B. A., & Keasling, J. D.
- Venue
- Proceedings of the National Academy of Sciences
- Published
- 2011-11-28
- Volume
- 108
- Issue
- 50
- Pages
- 19949-19954
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- OpenAlex
- W1997506884
- Cited by
- 361
- References
- 4
- FWCI
- 14.46
- Type
- journal article
- Language
- en
- Open access
- green
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- Bokinsky, G., Peralta-Yahya, P. P., George, A., Holmes, B. M., Steen, E. J., Dietrich, J., Soon Lee, T., Tullman-Ercek, D., Voigt, C. A., Simmons, B. A., & Keasling, J. D. (2011). Synthesis of three advanced biofuels from ionic liquid-pretreated switchgrass using engineered Escherichia coli. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.1106958108
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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