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Robust error-minimization in the genetic code across physicochemical metrics and variant codes: A graph-theoretic analysis in GF(2)6

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Could an intelligent alien predict earth's biochemistry?

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Climbing Mount Probable

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On the Origin of Genetically Coded Protein Synthesis

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Optical Ultrastructural Virometry Using Optoelectronic Aerosol Counters and Laser Aerosol Spectrometers. Is It Possible to Pose the Problem Correctly?

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What Are Ribozymes for? Arguing for Function Pluralism

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Genetic code robustness and protein evolvability are correlated and protein-specific

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Circular cut codes in genetic information

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The genetic code and its p -adic ultrametric modeling

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Reflections on Origins, Life, and the Origins of Life

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Mutational mechanisms and evolvability

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Genetic Code: Evolution

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Molecular Recognition of Amino Acids by RNA

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The Origin of the Information System in the RNA/Protein World: A Simulation Model of the Evolution of Translation and the Genetic CodePreprint

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Error minimization and specificity could emerge in a genetic code as by-products of prebiotic evolutionPreprint

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Pathways of Early Evolution From the Perspectives of a Riboreplisome – The Ultimate RNA Machine of LifePreprint

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Genetic Code Evolution in the RNA World and Beyond

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Fromneontstofiliontsand their progenies...

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RNA in Formation : Computational Studies on RNA Structure and Evolution

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Vector space of DNA genomic sequences on a Genetic Code Galois FieldPreprint

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Stochastic many-body problems in ecology, evolution, neuroscience, and systems biology

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Inference of higher order substitution dynamics by Markov chain lumpingPreprint

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p53 oncogene mutations in head and neck cancer based on the weighted Euclidean distance

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THREE FUNDAMENTALS OF THE BIOLOGICAL GENETIC ALGORITHM A Biologist's View ofBiological Inspiration vs. Biology Envy

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Inferring the Origin of the Genetic Code

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Fall 2009 Emergent States of Matter Term Essay

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Life originated as a genetic code

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Global mistranslation facilitates sampling of beneficial mutations under stressPreprint

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Considerations in evolutionary biochemistry

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Investigation of Codon Alternation Patterns in Genetic Diseases through Numerical Representation and Codon ClassificationPreprint

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Darwin’s Science’s Impact on the Evolution of the Microbiological Sciences

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The revolt of the clay

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.003.0009

Randomness as Irrelevance

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.003.0006

Introduction: a curious disconnect

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.003.0001

The problem of variation

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.003.0007

Moving on

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.003.0010

Evolutionary Randomness

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.003.0004

Происхождение генетического кода и трансляции в рамках современных концепций происхождения жизни

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Practical Randomness

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.003.0003

Ordinary randomness

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.003.0002

Analysis of translational fidelity in cellular proteins

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A felgyorsult fehérje körforgás szerepe a transzlációs hibákkal szembeni alkalmazkodási folyamatokban

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On the Possible Origin and Evolution of the Genetic Code

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Genetic Code: Evolution

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Faculty Opinions recommendation of Global mistranslation increases cell survival under stress in Escherichia coli.

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Investigation of codon alternation patterns in two neurodegenerative diseases through numerical representation and codon classification

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Structure and symmetries of the genetic codes for vertebrate, ascidian and yeast mitochondriaPreprint

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Randomness quotations

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.005.0003

List of Figures

(2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.002.0007

Irrelevance quotations

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.005.0004

Counting the universe of mutations

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.005.0002

Mutation exemplars

Stoltzfus, A. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.005.0001

List of Tables and Boxes

(2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.002.0008

Copyright Page

(2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198844457.002.0004

Noncoding RNAs: The Hybrid Information System

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A proteogenomic pipeline for the analysis of protein biosynthesis errors in the human pathogen Candida albicansPreprint

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Stochastic parabolic growth promotes coexistence and a relaxed error threshold in RNA-like replicator populationsPreprint

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Stochastic parabolic growth promotes coexistence and a relaxed error threshold in RNA-like replicator populations

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Stochastic parabolic growth promotes coexistence and a relaxed error threshold in RNA-like replicator populationsPreprint

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Stochastic parabolic growth promotes coexistence and a relaxed error threshold in RNA-like replicator populationsPreprint

Paczkó, M., Szathmáry, E., & Szilágyi, A. (2024) · eLife · doi:10.7554/elife.93208.2

The Role of Mutations, Addition of Amino Acids, and Exchange of Genetic Information in the Coevolution of Primitive Coding Systems

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As many domains of life as there are genetic codesPreprint

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Cellular Responses to Threonylcarbamoyladenosine (t6A) Deficiency in Saccharomyces cerevisiae

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Algorithmic bottlenecks in evolution: Genetic code, symbolic language, and the Great Filter hypothesis

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Experimental verification of the error minimization theory using non-standard genetic codes constructed in vitroPreprint

Miyachi, R., & Ichihashi, N. (2026) · eLife · doi:10.7554/elife.111164.1

A Hypercycle for Ribozymes or Viroids as Origin of Life

Moelling, K. (2026) · Springer eBooks · doi:10.1007/978-3-032-24295-2_23

Experimental verification of the error minimization theory using non-standard genetic codes constructed in vitroPreprint

Miyachi, R., & Ichihashi, N. (2026) · eLife · doi:10.7554/elife.111164.2

Periodic Temperature Fluctuations as an Energy Source for RNA Evolution

Mayer, C. (2026) · Life · doi:10.3390/life16060958

Physico-chemical aspects of protocode mats: a code-first reconstructionPreprint

Nesterov‐Mueller, A., & Schmidt, D. (2026) · SSRN Electronic Journal · doi:10.2139/ssrn.7331479

Triplet architecture enables deep error-minimization of the genetic codePreprint

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A Code Script for Life

Chatterjee, S. (2023) · Springer eBooks · doi:10.1007/978-3-031-23397-5_13

Genetic Code: Introduction

Watanabe, K., & Yokobori, S. (2011) · Encyclopedia of Life Sciences · doi:10.1002/9780470015902.a0000809.pub2

Imprints of the genetic code in the ribosome

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Evolution of the genetic code based on conservative changes of codons, amino acids, and aminoacyl tRNA synthetases

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Evolution of Life on Earth: tRNA, Aminoacyl-tRNA Synthetases and the Genetic Code

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