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Cited by 393

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Structural characterization of a 2:1 distamycin A.d(CGCAAATTGGC) complex by two-dimensional NMR.

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Pelton, J G, Wemmer, D E·1989·Proceedings of the National Academy of Sciences

Abstract

Two-dimensional NMR has been used to study the 2:1 distamycin A.d(CGCAAATTGGC).d(GCCAATTTGCG) complex. The nuclear Overhauser effect spectroscopy (NOESY) experiment was used to assign the aromatic and C1'H DNA protons and to identify drug-DNA contacts. These data indicate that two drug molecules bind simultaneously in the minor groove of the central 5'-AAATT-3' segment and are in close contact with both the DNA and one another. One drug binds with the formyl end close to the second adenine base of the A-rich strand, while the other drug binds with the formyl end close to the second adenine of the complementary strand. With this binding orientation, the positively charged propylamidinium groups are directed toward opposite ends of the helix. Molecular modeling shows that the minor groove must expand relative to the 1:1 complex to accommodate both drugs. Energy calculations suggest that electrostatic interactions, hydrogen bonds, and van der Waals forces contribute to the stability of the complex.

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Metadata

Authors
Pelton, J. G., & Wemmer, D. E.
Venue
Proceedings of the National Academy of Sciences
Published
1989-08
Volume
86
Issue
15
Pages
5723-5727
ISSN
  • 0027-8424 (ISSN-L)
  • 1091-6490
OpenAlex
W2011475362
Cited by
393
References
23
FWCI
2.60
Type
journal article
Language
en
Open access
green

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CoChat. (2026). Citation check: Structural characterization of a 2:1 distamycin A.d(CGCAAATTGGC) complex by two-dimensional NMR. https://app.cochat.ai/papers/10.1073/pnas.86.15.5723
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Pelton, J. G., & Wemmer, D. E. (1989). Structural characterization of a 2:1 distamycin A.d(CGCAAATTGGC) complex by two-dimensional NMR. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.86.15.5723

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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

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