Rch1, a protein that specifically interacts with the RAG-1 recombination-activating protein
Open accessAbstract
RAG1 and RAG2 are lymphoid-specific genes that together induce V(D)J recombinase activity in a variety of nonlymphoid cell types. While no other lymphoid-specific factors are required to induce recombination, other factors with more widespread expression patterns have been implicated in the reaction. However, none of these factors have been cloned, and their relationship to the RAG proteins is unclear. Using the yeast two-hybrid assay, we have identified RCH1, a gene encoding a protein of molecular weight 58,000 that interacts specifically with RAG-1. The predicted Rch1 protein sequence is 47% identical to yeast SRP1, a protein associated with the nuclear envelope. A truncated form of Rch1, which retains the ability to interact with RAG-1, reduces V(D)J recombination activity in HeLa cells.
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In humans, six importin-α isoforms are known.
“In humans, six importin-α isoforms are known [41], [42], [43], [44].”
From UV-Induced Nuclear Import of XPA Is Mediated by Importin-α4 in An ATR-Dependent Manner (2013) · cites this paper as [42]
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Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669 · see citing works
A novel genetic system to detect protein–protein interactions
Fields, S., & Song, O.-K. (1989) · Nature · doi:10.1038/340245a0 · Cited by 6,152 · see citing works
Kozak, M. (1986) · Cell · doi:10.1016/0092-8674(86)90762-2 · Cited by 4,741 · see citing works
RAG-1-deficient mice have no mature B and T lymphocytes
Mombaerts, P., Iacomini, J., Johnson, R. S., Herrup, K., Tonegawa, S., & Papaioannou, V. E. (1992) · Cell · doi:10.1016/0092-8674(92)90030-g · Cited by 2,898 · see citing works
RAG-2-deficient mice lack mature lymphocytes owing to inability to initiate V(D)J rearrangement
Shinkai, Y. (1992) · Cell · doi:10.1016/0092-8674(92)90029-c · Cited by 2,651 · see citing works
Isolation of monoclonal antibodies specific for human c-myc proto-oncogene product.
Evan, G. I., Lewis, G. K., Ramsay, G. M., & Bishop, J. M. (1985) · Molecular and Cellular Biology · doi:10.1128/mcb.5.12.3610 · Cited by 2,412 · see citing works
A severe combined immunodeficiency mutation in the mouse
Bosma, G. C., Custer, R. P., & Bosma, M. J. (1983) · Nature · doi:10.1038/301527a0 · Cited by 2,223 · see citing works
Cdi1, a human G1 and S phase protein phosphatase that associates with Cdk2
Gyuris, J. (1993) · Cell · doi:10.1016/0092-8674(93)90498-f · Cited by 1,534 · see citing works
Self-citationRAG-1 and RAG-2, Adjacent Genes That Synergistically Activate V(D)J Recombination
Oettinger, M. A., Schatz, D. G., Gorka, C., & Baltimore, D. (1990) · Science · doi:10.1126/science.2360047 · Cited by 1,457 · see citing works
Self-citationThe retinoblastoma protein associates with the protein phosphatase type 1 catalytic subunit.Preprint
Durfee, T. J., Becherer, K., Chen, P., Yeh, S. H., Yang, Y., Kilburn, A. E., Lee, W., & Elledge, S. J. (1993) · Genes & Development · doi:10.1101/gad.7.4.555 · Cited by 1,451 · see citing works
The V(D)J recombination activating gene, RAG-1
Schatz, D. G., Oettinger, M. A., & Baltimore, D. (1989) · Cell · doi:10.1016/0092-8674(89)90760-5 · Cited by 1,160 · see citing works
Self-citationIsolation of Monoclonal Antibodies Specific for Human c-myc Proto-Oncogene Product
Evan, G. I., Lewis, G. K., Ramsay, G. M., & Bishop, J. M. (1985) · Molecular and Cellular Biology · doi:10.1128/mcb.5.12.3610-3616.1985 · Cited by 795 · see citing works
Mxi1, a protein that specifically interacts with Max to bind Myc-Max recognition sites
Zervos, A. S., Gyuris, J., & Brent, R. (1993) · Cell · doi:10.1016/0092-8674(93)90662-a · Cited by 769 · see citing works
Self-citationAn LFA-3 cDNA encodes a phospholipid-linked membrane protein homologous to its receptor CD2
Seed, B. (1987) · Nature · doi:10.1038/329840a0 · Cited by 690 · see citing works
Dalton, S., & Treisman, R. (1992) · Cell · doi:10.1016/0092-8674(92)90194-h · Cited by 672 · see citing works
A repeating amino acid motif shared by proteins with diverse cellular roles
Peifer, M. A., Berg, S., & Reynolds, A. B. (1994) · Cell · doi:10.1016/0092-8674(94)90353-0 · Cited by 643 · see citing works
Enhanced expression of a glyceraldehyde-3-phosphate dehydrogenase gene in human lung cancers.
Tokunaga, K., Nakamura, Y., Sakata, K., Fujimori, K., Ohkubo, M., Sawada, K., & Sakiyama, S. (1987) · PubMed · Cited by 537 · see citing works
The scid mutation in mice causes a general defect in DNA repair
Fulop, G. M., & Phillips, R. A. (1990) · Nature · doi:10.1038/347479a0 · Cited by 532 · see citing works
Biedermann, K. A., Sun, J., Giaccia, A. J., Tosto, L. M., & Brown, J. M. (1991) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.88.4.1394 · Cited by 515 · see citing works
Impairment of V(D)J Recombination in Double-Strand Break Repair Mutants
Taccioli, G. E., Rathbun, G. A., Oltz, E. M., Stamato, T. D., Jeggo, P. A., & Alt, F. W. (1993) · Science · doi:10.1126/science.8469973 · Cited by 451 · see citing works
A link between double-strand break-related repair and V(D)J recombination: the scid mutation.
Hendrickson, E. A., Qin, X., Bump, E. A., Schatz, D. G., Oettinger, M. A., & Weaver, D. T. (1991) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.88.10.4061 · Cited by 286 · see citing works
Self-citationDevelopmental stage specificity of the lymphoid V(D)J recombination activity.Preprint
Lieber, M. R., Hesse, J. E., Mizuuchi, K., et al. (1987) · Genes & Development · doi:10.1101/gad.1.8.751 · Cited by 198 · see citing works
V(D)J Recombination in Mammalian Cell Mutants Defective in DNA Double-Strand Break Repair
Pergola, F., Zdzienicka, M. Z., & Lieber, M. R. (1993) · Molecular and Cellular Biology · doi:10.1128/mcb.13.6.3464 · Cited by 189 · see citing works
Generating yeast transcriptional activators containing no yeast protein sequences
Ruden, D. M., Ma, J., Li, Y., et al. (1991) · Nature · doi:10.1038/350250a0 · Cited by 175 · see citing works
Yano, R., Oakes, M., Yamaghishi, M., et al. (1992) · Molecular and Cellular Biology · doi:10.1128/mcb.12.12.5640-5651.1992 · Cited by 171 · see citing works
Dispensable sequence motifs in the RAG-1 and RAG-2 genes for plasmid V(D)J recombination.
Silver, D. P., Spanopoulou, E., Mulligan, R. C., & Baltimore, D. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.13.6100 · Cited by 160 · see citing works
The mouse mutation severe combined immune deficiency (scid) is on chromosome 16
Bosma, G. C., Davisson, M. T., Ruetsch, N. R., et al. (1989) · Immunogenetics · doi:10.1007/bf02341614 · Cited by 111 · see citing works
V(D)J Recombination in Mammalian Cell Mutants Defective in DNA Double-Strand Break Repair
Pergola, F., Zdzienicka, M. Z., & Lieber, M. R. (1993) · Molecular and Cellular Biology · doi:10.1128/mcb.13.6.3464-3471.1993 · Cited by 54 · see citing works
Flagged first, then by citations
Research works printed but not linked: 3
- [7]Biedermann, K. A., Sun, J. R., Giaccia, A. J., Tosto, L. M. & Brown, J. M. (1991) Proc. Natl. Acad. Sci. USA 88, 1394–1397.
- [8]Hendrickson, E. A., Qin, X.-Q., Bump, E. A., Schatz, D. G., Oettinger, M. A. & Weaver, D. T. (1991) Proc. Natl. Acad. Sci. USA 88, 4061– 4065.
- [26]Silver, D. P., Spanopolou, E., Mulligan, R. C. & Baltimore, D. (1993) Proc. Natl. Acad. Sci. USA 90, 6100–6104.
Cited by
Sorted by citations
Nuclear Localization and Export Signals of the Human Aryl Hydrocarbon Receptor
Ikuta, T., Eguchi, H., Tachibana, T., Yoneda, Y., & Kawajiri, K. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.5.2895 · Cited by 287 · see citing works
Köhler, M., Ansieau, S., Prehn, S., Leutz, A., Haller, H., & Hartmann, E. (1997) · FEBS Letters · doi:10.1016/s0014-5793(97)01265-9 · Cited by 228 · see citing works
Mutations of acidic residues in RAG1 define the active site of the V(D)J recombinase
Kim, D. R., Dai, Y., Mundy, C. L., Yang, W., & Oettinger, M. A. (1999) · Genes & Development · doi:10.1101/gad.13.23.3070 · Cited by 199 · see citing works
Self-citationRAG-1 interacts with the repeated amino acid motif of the human homologue of the yeast protein SRP1
Cortes, P., Ye, Z. S., & Baltimore, D. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.16.7633 · Cited by 173 · see citing works
UV-Induced Nuclear Import of XPA Is Mediated by Importin-α4 in An ATR-Dependent Manner
Li, Z., Musich, P. R., Cartwright, B. M., Wang, H., & Zou, Y. (2013) · PLoS ONE · doi:10.1371/journal.pone.0068297 · Cited by 26 · see citing works
“In humans, six importin-a isoforms are known [41,42,43,44].”
Background
- Authors
- Cuomo, C. A., Kirch, S. A., Gyuris, J., Brent, R., & Oettinger, M. A.
- Affiliations
- Harvard University (US)
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 1994-06-21
- Volume
- 91
- Issue
- 13
- Pages
- 6156-6160
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC44157
- OpenAlex
- W2150627415
- Cited by
- 164
- References
- 28
- Citations by year
- 2022: 1 · 2021: 1 · 2020: 1 · 2016: 1 · 2015: 4 · 2014: 3 · 2013: 4 · 2012: 5
- FWCI
- 7.86
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- National Institute of General Medical Sciences (GM 48026, R01GM048026)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and B-cell Immunology
- Keywords
- RAG1, RAG2, V(D)J recombination, protein-protein interaction, nuclear envelope, HeLa cells
- MeSH terms
- Amino Acid Sequence, B-Lymphocytes, Base Sequence, Carrier Proteins, Cell Line, Chromosome Mapping, Chromosomes, Human, Pair 17, DNA Nucleotidyltransferases, Enzyme Induction, HeLa Cells, Humans, Molecular Sequence Data, Molecular Weight, Nuclear Proteins, Organ Specificity, Proteins, Recombinant Fusion Proteins, Repetitive Sequences, Nucleic Acid, Saccharomyces cerevisiae, T-Lymphocytes, Protein Biosynthesis, Restriction Mapping, Gene Expression, Sequence Homology, Amino Acid, Homeodomain Proteins, alpha Karyopherins, VDJ Recombinases
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