The N-end rule: functions, mysteries, uses
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Items 101–200 of 856
- Vectorial proteomics reveal targeting, phosphorylation and specific fragmentation of polymerase I and transcript release factor (PTRF) at the surface of caveolae in human adipocytesNabila Aboulaich, Julia P. Vainonen, Peter Strålfors, Alexander V. Vener · 2004 · Biochemical Journal
- RGS4 Is Arginylated and Degraded by the N-end Rule Pathway in VitroIlia V. Davydov, Alexander J. Varshavsky · 2000 · Journal of Biological Chemistry
- The E2–E3 interaction in the N‐end rule pathway: the RING‐H2 finger of E3 is required for the synthesis of multiubiquitin chainYouming Xie, Alexander J. Varshavsky · 1999 · The EMBO Journal
- Control of protein life‐span by N‐terminal methionine excisionCarmela Giglione, Olivier Vallon, Thierry Meinnel · 2002 · The EMBO Journal
- Interaction between RGS7 and polycystinEmily Kim, Thierry Arnould, Lorenz K. Sellin, Thomas R. Benzing, Natalia Comella, Olivier N. Kocher, Leonidas Tsiokas, Vikas P. Sukhatme, Gerd Walz · 1999 · Proceedings of the National Academy of Sciences
- A battle for iron: host sequestration and Staphylococcus aureus acquisitionHaley, Kathryn P., Skaar, Eric P. · 2012 · Microbes and Infection
- Control of mammalian G protein signaling by N-terminal acetylation and the N-end rule pathwaySang-Eun Park, Jeong‐Mok Kim, Ok-Hee Seok, Hanna Cho, Brandon C. Wadas, Seon‐Young Kim, Alexander J. Varshavsky, Cheol-Sang Hwang · 2015 · Science
- Precise quantification of translation inhibition by mRNA structures that overlap with the ribosomal footprint in N-terminal coding sequencesAmin Espah Borujeni, Daniel P. Cetnar, Iman Farasat, Ashlee Smith, Natasha Lundgren, Howard M. Salis · 2017 · Nucleic Acids Research
- Toxin-Based Therapeutic ApproachesAssaf Shapira, Itai Benhar · 2010 · Toxins
- Clp‐mediated proteolysis in Gram‐positive bacteria is autoregulated by the stability of a repressorElke Krüger, Daniela Zühlke, Elke Witt, Holger Ludwig, Michael Hecker · 2001 · The EMBO Journal
- Construction and Analysis of Mouse Strains Lacking the Ubiquitin Ligase UBR1 (E3α) of the N-End Rule PathwayYong Tae Kwon, Zanxian Xia, Ilia V. Davydov, Stewart H. Lecker, Alexander J. Varshavsky · 2001 · Molecular and Cellular Biology
- Rates of ubiquitin conjugation increase when muscles atrophy, largely through activation of the N-end rule pathwayVered Solomon, Vickie Elaine Baracos, Pasha Sarraf, Alfred Lewis Goldberg · 1998 · Proceedings of the National Academy of Sciences
- A cloning method to identify caspases and their regulators in yeast: Identification of Drosophila IAP1 as an inhibitor of the Drosophila caspase DCP-1Christine J. Hawkins, Susan L. Wang, Bruce A. Hay · 1999 · Proceedings of the National Academy of Sciences
- An oncolytic adenoviral vector of Smac increases antitumor activity of TRAIL against HCC in human cells and in miceZifei Pei, Liang Chu, Weiguo Zou, Zilai Zhang, Songbo Qiu, Rong Qi, Jinfa Gu, Cheng Qian, Xinyuan Liu · 2004 · Hepatology
- Integrated transcriptome and proteome data: The challenges aheadCatherine Jane Hack · 2004 · Briefings in Functional Genomics and Proteomics
- Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligasesWoo Suk Choi, Byung‐Cheon Jeong, Yoo Jin Joo, Myeong-Ryeol Lee, Joon Kim, Michael J. Eck, Hyun Kyu Song · 2010 · Nature Structural & Molecular Biology
- The Substrate Recognition Domains of the N-end Rule PathwayTasaki, Takafumi, Zakrzewska, Adriana, Dudgeon, Drew D., Jiang, Yonghua, Lazo, John S., Kwon, Yong Tae · 2009 · Journal of Biological Chemistry
- A delayed leaf senescence mutant is defective in arginyl‐tRNA:protein arginyltransferase, a component of the N‐end rule pathway in ArabidopsisSatoko Yoshida, Masaki A. Ito, Judy Callis, Ikuo Nishida, Akira Watanabe · 2002 · The Plant Journal
- The N-end rule pathway is mediated by a complex of the RING-type Ubr1 and HECT-type Ufd4 ubiquitin ligasesCheol‐Sang Hwang, Anna Shemorry, Daniel Auerbach, Alexander J. Varshavsky · 2010 · Nature Cell Biology
- Proteomics-based Target IdentificationHarry Towbin, Kenneth W. Bair, James A. DeCaprio, Michael J. Eck, Sunkyu Kim, Frederick R. Jr. Kinder, Anthony A. Morollo, Dieter R. Mueller, Patrick A. Schindler, Hyun Kyu Song et al. · 2003 · Journal of Biological Chemistry
- Tripartite degrons confer diversity and specificity on regulated protein degradation in the ubiquitin-proteasome systemGuharoy, Mainak, Bhowmick, Pallab, Sallam, Mohamed, Tompa, Peter · 2016 · Nature Communications
- Female Lethality and Apoptosis of Spermatocytes in Mice Lacking the UBR2 Ubiquitin Ligase of the N-End Rule PathwayYong Tae Kwon, Zanxian Xia, Jee Young An, Takafumi Tasaki, Ilia V. Davydov, Jai Wha Seo, Jun Sheng, Youming Xie, Alexander J. Varshavsky · 2003 · Molecular and Cellular Biology
- The ubiquitin-proteasome pathway as a therapeutic target for muscle wasting.Michael John Tisdale · 2005 · PubMed
- Orchestrating anaphase and mitotic exit: separase cleavage and localization of Slk19Matthew Sullivan, Christine Lehane, Frank Uhlmann · 2001 · Nature Cell Biology
- The N-terminal to C-terminal motif in protein folding and functionKrishna M.G. Mallela, S. Walter Englander · 2005 · Proceedings of the National Academy of Sciences
- Disparity between changes in mRNA abundance and enzyme activity in Corynebacterium glutamicum: implications for DNA microarray analysisChristoph Glanemann, A. Loos, Nathalie Gorret, Laura B. Willis, Xian M. O’Brien, Philip A. Lessard, Anthony J. Sinskey · 2002 · Applied Microbiology and Biotechnology
- New aspects of altitude adaptation in Tibetans: a proteomic approachCecilia Gelfi, Sara De Palma, Marilena Ripamonti, Robin Wait, Ivano Eberini, Ashok Bajracharya, Claudio Marconi, Adrian Schneider, Hans H. Hoppeler, P. Cerretelli · 2004 · The FASEB Journal
- Synthesis/Degradation Ratio Mass Spectrometry for Measuring Relative Dynamic Protein TurnoverBenjamin J. Cargile, Jonathan L. Bundy, Amy Michele Grunden, James L. Stephenson · 2003 · Analytical Chemistry
- Controlled destruction: AAA+ ATPases in protein degradation from bacteria to eukaryotesFrank Striebel, Wolfgang Kress, Eilika U. Weber-Ban · 2009 · Current Opinion in Structural Biology
- The Human Lysyl-tRNA Synthetase Gene Encodes Both the Cytoplasmic and Mitochondrial Enzymes by Means of an Unusual Alternative Splicing of the Primary TranscriptElena N. Tolkunova, Hye Jeong Park, Jun Xia, Michael P. King, Edgar Davidson · 2000 · Journal of Biological Chemistry
- Cdc34 and the F-box protein Met30 are required for degradation of the Cdk-inhibitory kinase Swe1Peter Kaiser, Rey A. L. Sia, Elaine S.G. Bardes, Daniel J. Lew, Steven I. Reed · 1998 · Genes & Development
- The Clp protease system; a central component of the chloroplast protease networkPaul Dominic B. Olinares, Jitae Kim, Klaas Jan van Wijk · 2010 · Biochimica et Biophysica Acta (BBA) - Bioenergetics
- Polyamines regulate their synthesis by inducing expression and blocking degradation of ODC antizymeR. Palanimurugan, Hartmut Scheel, Kay Hofmann, R. Jürgen Dohmen · 2004 · The EMBO Journal
- Identification of a Calmodulin-binding NAC Protein as a Transcriptional Repressor in ArabidopsisHo Soo Kim, Byung Ouk Park, Jae Hyuk Yoo, Mi Soon Jung, Sang Min Lee, Hay Ju Han, Kyung Eun Kim, Sun Ho Kim, Chae Oh Lim, Dae‐Jin Yun et al. · 2007 · Journal of Biological Chemistry
- The ubiquitin‐specific protease UBP14 is essential for early embryo development in Arabidopsis thalianaJed H. Doelling, Ning Yan, Jasmina Kurepa, Joseph M. Walker, Richard David Vierstra · 2001 · The Plant Journal
- Attenuation of Zinc Finger Nuclease Toxicity by Small-Molecule Regulation of Protein LevelsShondra M. Pruett‐Miller, David W. Reading, Shaina N. Porter, Matthew Hebden Porteus · 2009 · PLoS Genetics
- The N-end Rule Pathway Catalyzes a Major Fraction of the Protein Degradation in Skeletal MuscleVered Solomon, Stewart H. Lecker, Alfred Lewis Goldberg · 1998 · Journal of Biological Chemistry
- E3 ligase Rad18 promotes monoubiquitination rather than ubiquitin chain formation by E2 enzyme Rad6Richard G. Hibbert, Anding Huang, Rolf Boelens, Titia K. Sixma · 2011 · Proceedings of the National Academy of Sciences
- Scalable inference of heterogeneous reaction kinetics from pooled single-cell recordingsChristoph Zechner, M. Unger, Serge B. Pelet, Matthias Peter, Heinz Koeppl · 2014 · Nature Methods
- A squalene synthase protein degradation method for improved sesquiterpene production in Saccharomyces cerevisiaeBingyin Peng, Manuel R. Plan, Panagiotis K. Chrysanthopoulos, Mark P. Hodson, Lars Keld Nielsen, Claudia Estelle Vickers · 2016 · Metabolic Engineering
- Clp chaperone–proteases: structure and functionWolfgang Kress, Željka Maglica, Eilika U. Weber-Ban · 2009 · Research in Microbiology
- Evidence for Direct Interaction between Sprouty and CblEsther Sook Miin Wong, Jormay Lim, Boon Chuan Low, Qiping Chen, Graeme R. Guy · 2001 · Journal of Biological Chemistry
- The mysteries of nitrogen balanceJohn Conrad Waterlow · 1999 · Nutrition Research Reviews
- Listeriolysin O: a key protein ofListeria monocytogeneswith multiple functionsSamer Kayal, Alain Charbit · 2006 · FEMS Microbiology Reviews
- Plasma membrane localization signals in the light chain of botulinum neurotoxinEster Fernández‐Salas, Lance E. Steward, Helen Ho, Patton E. Garay, Sarah W. Sun, Marcella A. Gilmore, Joseph V. Ordas, Joanne Wang, Joseph Francis, Kei Roger Aoki · 2004 · Proceedings of the National Academy of Sciences
- Production of plant proteases in vivo and in vitro — A reviewGonzález-Rábade, Nuria, Badillo-Corona, Jesús Agustín, Aranda-Barradas, Juan Silvestre, Oliver-Salvador, María del Carmen · 2011 · Biotechnology Advances
- The N‐end rule pathway controls the import of peptides through degradation of a transcriptional repressorChristopher Byrd, Glenn C Turner, Alexander J. Varshavsky · 1998 · The EMBO Journal
- Arabidopsis COP10 is a ubiquitin-conjugating enzyme variant that acts together with COP1 and the COP9 signalosome in repressing photomorphogenesisGenki Suzuki, Yuki Yanagawa, Shing F. Kwok, Minami Matsui, Xing‐Wang Deng · 2002 · Genes & Development
- Fluorescent probes for proteolysis: Tools for drug discoveryJacques Neefjes, Nico P. Dantuma · 2004 · Nature Reviews Drug Discovery
- Microarray-based analysis of fish egg quality after natural or controlled ovulationÉmilie Bonnet, Alexis Fostier, Julien Bobe · 2007 · BMC Genomics
- Human mitochondrial peptide deformylase, a new anticancer target of actinonin-based antibioticsMona D. Lee, Yuhong She, Michael J. Soskis, Christopher P. Borella, Jeffrey R. Gardner, Paula A. Hayes, Benzon M. Dy, Mark Lawrence Heaney, Mark R. Philips, William G. Bornmann et al. · 2004 · Journal of Clinical Investigation
- Identification of Novel ErbB3-Interacting Factors Using the Split-Ubiquitin Membrane Yeast Two-Hybrid SystemSafia Thaminy, Daniel Auerbach, Anthony Arnoldo, Igor Štagljar · 2003 · Genome Research
- Kendrin Is a Novel Substrate for Separase Involved in the Licensing of Centriole DuplicationKazuhiko Matsuo, Keita Ohsumi, Mari Iwabuchi, Toshio Kawamata, Yoshitaka Ono, Mikiko Takahashi · 2012 · Current Biology
- Seamless cloning and gene fusionQuinn Lu · 2005 · Trends in biotechnology
- ClpS1 Is a Conserved Substrate Selector for the Chloroplast Clp Protease System in ArabidopsisKenji J. Nishimura, Y. Asakura, Giulia Friso, J. Kim, S.-h. Oh, Heidi L. Rutschow, Lalit Ponnala, Klaas Jan van Wijk · 2013 · The Plant Cell
- The N-end rule pathway controls multiple functions during Arabidopsis shoot and leaf developmentEmmanuelle Graciet, Franziska Walter, Diarmuid S. Ó’Maoiléidigh, Stephan Pollmann, Elliot M. Meyerowitz, Alexander J. Varshavsky, Frank Wellmer · 2009 · Proceedings of the National Academy of Sciences
- Spatiotemporal Regulation of c-Fos by ERK5 and the E3 Ubiquitin Ligase UBR1, and Its Biological RoleTakanori Sasaki, Hirotada Kojima, Rikiya Kishimoto, Ayu Ikeda, Hiroyuki Kunimoto, Koich Nakajima · 2006 · Molecular Cell
- Efficient genetic modification of murine dendritic cells by electroporation with mRNASonja Van Meirvenne, Lieven Straetman, Carlo Heirman, Mélissa Dullaers, Catherine De Greef, Viggo F. Van Tendeloo, Kris Thielemans · 2002 · Cancer Gene Therapy
- Degradation signals in the lysine–asparagine sequence spaceTakashi Suzuki, Alexander J. Varshavsky · 1999 · The EMBO Journal
- The N-end rule pathway is a sensor of hemeRonggui Hu, Haiqing Wang, Zanxian Xia, Alexander J. Varshavsky · 2007 · Proceedings of the National Academy of Sciences
- The autotransporter secretion systemMickaël Desvaux, Nicholas J. Parham, Ian R. Henderson · 2003 · Research in Microbiology
- The UBA2 Domain Functions as an Intrinsic Stabilization Signal that Protects Rad23 from Proteasomal DegradationStijn Heessen, Maria Grazia Masucci, Nico P. Dantuma · 2005 · Molecular Cell
- Identification of protein stability determinants in chloroplastsWiebke Apel, Waltraud X. Schulze, Ralph Bock · 2010 · The Plant Journal
- Assembly of Alphavirus Replication Complexes from RNA and Protein Components in a Novel trans -Replication System in Mammalian CellsPirjo Spuul, Giuseppe Balistreri, Kirsi Hellström, Andrey Golubtsov, Eija Jokitalo, Tero Ahola · 2011 · Journal of Virology
- Bacterial infectious disease control by vaccine developmentRoy Curtiss · 2002 · Journal of Clinical Investigation
- Evolution of Peptidase DiversityMichael J. Page, Enrico Di · 2008 · Journal of Biological Chemistry
- Molecular basis of GID4-mediated recognition of degrons for the Pro/N-end rule pathwayDong, Cheng, Zhang, Heng, Li, Li, Tempel, Wolfram, Loppnau, Peter, Min, Jinrong · 2018 · Nature Chemical Biology
- Regulation of Protein Catabolism by Muscle-Specific and Cytokine-Inducible Ubiquitin Ligase E3α-II during Cancer CachexiaKeith S. Kwak, Xiaolan Zhou, Vered Solomon, Vickie Elaine Baracos, James G. Davis, Anthony W. Bannon, William J. Boyle, David L. Lacey, H.Q. Han · 2004 · Cancer Research
- The N-end rule pathway: From recognition by N-recognins, to destruction by AAA+proteasesDavid A. Dougan, Dimce Micevski, Kaye N. Truscott · 2011 · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
- Variations in the association of papillomavirus E2 proteins with mitotic chromosomesJaquelline Germano de Oliveira, Leremy A. Colf, Alison A. McBride · 2006 · Proceedings of the National Academy of Sciences
- The 2′,5′-Oligoadenylate Synthetase 1b Is a Potent Inhibitor of West Nile Virus Replication Inside Infected CellsAnna Kajaste‐Rudnitski, Tomoji Mashimo, Marie‐Pascale Frenkiel, Jean‐Louis Guénet, Marianne Lucas‐Hourani, Philippe Desprès · 2005 · Journal of Biological Chemistry
- Regulation by proteolysis: Developmental switchesSusan Gottesman · 1999 · Current Opinion in Microbiology
- Altered Activity, Social Behavior, and Spatial Memory in Mice Lacking the NTAN1p Amidase and the Asparagine Branch of the N-End Rule PathwayYong Tae Kwon, Seth A. Balogh, Ilia V. Davydov, Anna S. Kashina, Jeong Kyo Yoon, Youming Xie, Arti B Gaur, Lynn A. Hyde, Victor H. Denenberg, Alexander J. Varshavsky · 2000 · Molecular and Cellular Biology
- Effect of a pyruvate kinase (pykF-gene) knockout mutation on the control of gene expression and metabolic fluxes in Escherichia coliKhandaker Siddiquee, Marcos J. Arauzo-Bravo, Kazuyuki Shimizu · 2004 · FEMS Microbiology Letters
- Intracellular targeting of the proteasomeChristian Hirsch, Hidde L. Ploegh · 2000 · Trends in Cell Biology
- Organellar peptide deformylases: universality of the N-terminal methionine cleavage mechanismCarmela Giglione, Thierry Meinnel · 2001 · Trends in Plant Science
- Multiplicity and regulation of genes encoding peptide transporters in Saccharomyces cerevisiaeMelinda Hauser, Vanny Narita, Amy M. Donhardt, Fred R. Naider, Jeffrey M. Becker · 2001 · Molecular Membrane Biology
- Pairs of dipeptides synergistically activate the binding of substrate by ubiquitin ligase through dissociation of its autoinhibitory domainFangyong Du, Federico Navarro, Zanxian Xia, Takafumi Tasaki, Alexander J. Varshavsky · 2002 · Proceedings of the National Academy of Sciences
- Ubiquitin Fusion Technique and Related MethodsAlexander J. Varshavsky · 2005 · Methods in enzymology on CD-ROM/Methods in enzymology
- The bacterial N-end rule pathway: expect the unexpectedDavid A. Dougan, Kaye N. Truscott, Kornelius Zeth · 2010 · Molecular Microbiology
- RECQL4, mutated in the Rothmund–Thomson and RAPADILINO syndromes, interacts with ubiquitin ligases UBR1 and UBR2 of the N-end rule pathwayJinhu Yin, Yong Tae Kwon, Alexander J. Varshavsky, Weidong Wang · 2004 · Human Molecular Genetics
- A new screen for protein interactions reveals that the Saccharomyces cerevisiae high mobility group proteins Nhp6A/B are involved in the regulation of the GAL1 promoterHeike Laser, Christine Bongards, Jutta Schüller, Stephanie Heck, Nils Johnsson, Norbert Lehming · 2000 · Proceedings of the National Academy of Sciences
- Two F‐box/WD‐repeat proteins Pop1 and Pop2 form hetero‐ and homo‐complexes together with cullin‐1 in the fission yeast SCF (Skp1‐Cullin‐1‐F‐box) ubiquitin ligaseKin‐ichiro Kominami, Itziar Ochotorena, Takashi Toda · 1998 · Genes to Cells
- Substrate-binding Sites of UBR1, the Ubiquitin Ligase of the N-end Rule PathwayZanxian Xia, Ailsa Webster, Fangyong Du, Konstantin I. Piatkov, Michel Ghislain, Alexander J. Varshavsky · 2008 · Journal of Biological Chemistry
- Antifungal Activities of Antineoplastic Agents: Saccharomyces cerevisiae as a Model System To Study Drug ActionMaria Elena Cardenas, Maria Cristina Cruz, Maurizio Del Poeta, Namjin Chung, John R. Perfect, Joseph Heitman · 1999 · Clinical Microbiology Reviews
- Ube2W conjugates ubiquitin to α-amino groups of protein N-terminiMichael H. Tatham, Anna Plechanovová, Ellis Jaffray, Helena Salmen, Ronald T. Hay · 2013 · Biochemical Journal
- The N-end rule and regulation of apoptosisAlexander J. Varshavsky · 2003 · Nature Cell Biology
- Posttranslational Control of ALA Synthesis Includes GluTR Degradation by Clp Protease and Stabilization by GluTR-Binding ProteinJanina Apitz, Kenji J. Nishimura, Judith Schmied, Anja A. Wolf, Boris Hedtke, Klaas Jan van Wijk, Bernhard Grimm · 2016 · PLANT PHYSIOLOGY
- Amyloid Precursor Protein (APP) Metabolites APP Intracellular Fragment (AICD), Aβ42, and Tau in Nuclear RolesGerhard Multhaup, Otmar Huber, Luc Buée, Marie‐Christine Galas · 2015 · Journal of Biological Chemistry
- Srb7p is a physical and physiological target of Tup1pAnne Gromöller, Norbert Lehming · 2000 · The EMBO Journal
- N-Terminal Residues Control Proteasomal Degradation of RGS2, RGS4, and RGS5 in Human Embryonic Kidney 293 CellsJohannes Bodenstein, Roger K. Sunahara, Richard R. Neubig · 2007 · Molecular Pharmacology
- The plant N-end rule pathway: structure and functionsEmmanuelle Graciet, Frank Wellmer · 2010 · Trends in Plant Science
- Polycistronic Viral VectorsPablo de Felipe · 2002 · Current Gene Therapy
- Selective inhibition of amino-terminal methionine processing by TNP-470 and ovalicin in endothelial cellsBenjamin E. Turk, Eric C. Griffith, Susan Wolf, KLAUS BIEMANN, Yie‐Hwa Chang, Jun O. Liu · 1999 · Chemistry & Biology
- N-terminal Protein Processing: A Comparative Proteogenomic AnalysisStefano R. Bonissone, Nitin Gupta, Margaret F. Romine, Ralph A. Bradshaw, Pavel A. Pevzner · 2012 · Molecular & Cellular Proteomics
- Discovery of Cellular Regulation by Protein DegradationAlexander J. Varshavsky · 2008 · Journal of Biological Chemistry
- The products of the yeast MMS2 and two human homologs (hMMS2 and CROC- 1) define a structurally and functionally conserved Ubc-like protein familyWei Xiao · 1998 · Nucleic Acids Research
- DNA Vaccination against Tuberculosis: Expression of a Ubiquitin-Conjugated Tuberculosis Protein Enhances Antimycobacterial ImmunityGiovanni Delogu, Angela D. Howard, Frank M. Collins, Sheldon L. Morris · 2000 · Infection and Immunity
- Multiubiquitin Chain Binding Subunit MCB1 (RPN10) of the 26S Proteasome Is Essential for Developmental Progression in Physcomitrella patensPierre‐Alain Girod, Hongyong Fu, Jean‐Pierre Zrÿd, Richard David Vierstra · 1999 · The Plant Cell
- The early history of the ubiquitin fieldAlexander J. Varshavsky · 2006 · Protein Science