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Properties of the Permeability Transition Pore in Mitochondria Devoid of Cyclophilin D
Open accessAbstract
We have studied the properties of the permeability transition pore (PTP) in mitochondria from the liver of mice where the Ppif gene encoding for mitochondrial Cyclophilin D (CyP-D) had been inactivated. Mitochondria from Ppif-/- mice had no CyP-D and displayed a striking desensitization of the PTP to Ca2+, in that pore opening required about twice the Ca2+ load necessary to open the pore in strain-matched, wild-type mitochondria. Mitochondria lacking CyP-D were insensitive to Cyclosporin A (CsA), which increased the Ca2+ retention capacity only in mitochondria from wild-type mice. The PTP response to ubiquinone 0, depolarization, pH, adenine nucleotides, and thiol oxidants was similar in mitochondria from wild-type and Ppif-/- mice. These experiments demonstrate that (i) the PTP can form and open in the absence of CyP-D, (ii) that CyP-D represents the target for PTP inhibition by CsA, and (iii) that CyP-D modulates the sensitivity of the PTP to Ca2+ but not its regulation by the proton electrochemical gradient, adenine nucleotides, and oxidative stress. These results have major implications for our current understanding of the PTP and its modulation in vitro and in vivo.
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“To date, peptidylprolyl isomerase F (PPIF; best known as cyclophilin D, CYPD) is the only protein whose in vivo requirement for MPT induction has been formally validated with robust genetic tools (although there is consensus around the notion that CYPD does not constitute the pore-forming unit of the PTPC) [376–379].”
From Molecular mechanisms of cell death: recommendations of the nomenclature committee on cell death 2018. (2018) · cites this paper as [378]
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“although there is consensus around the notion that CYPD does not constitute the pore-forming unit of the PTPC) [376–379].”
From Molecular mechanisms of cell death: recommendations of the nomenclature committee on cell death 2018. (2018) · cites this paper as [378]
In the citing paper
“Interestingly, at very high levels of Ca2+, cyclophilin D-deficient cells or cells treated with cyclosporin A still have an MPT response (25, 31, 167, 309).”
From Redox regulation of mitochondrial function (2012) · cites this paper as [31]
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Cites
Mitochondrial Transport of Cations: Channels, Exchangers, and Permeability Transition
Bernardi, P. (1999) · Physiological Reviews · doi:10.1152/physrev.1999.79.4.1127 · Cited by 1,546
Self-citationCytochrome C -Mediated Apoptosis
Jiang, X., & Wang, X. (2004) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.73.011303.073706 · Cited by 1,374
The ADP/ATP translocator is not essential for the mitochondrial permeability transition pore
Kokoszka, J. E., Waymire, K. G., Levy, S. E., Sligh, J. E., Cai, J., Jones, D. P., MacGregor, G. R., & Wallace, D. C. (2004) · Nature · doi:10.1038/nature02229 · Cited by 1,086
The Ca2+-induced membrane transition in mitochondria
Hunter, D. R., & Haworth, R. A. (1979) · Archives of Biochemistry and Biophysics · doi:10.1016/0003-9861(79)90371-0 · Cited by 872
Crompton, M., Ellinger, H., & COSTI, A. (1988) · PubMed Central · Cited by 841
Broekemeier, K. M., Dempsey, M. E., & Pfeiffer, D. R. (1989) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)83116-7 · Cited by 699
Di Lisa, F., Menabò, R., Canton, M., Barile, M., & Bernardi, P. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m006825200 · Cited by 678
Self-citationProtection by Cyclosporin A of Ischemia/Reperfusion-Induced Damage in Isolated Rat Hearts
Griffiths, E. J., & Halestrap, A. P. (1993) · Journal of Molecular and Cellular Cardiology · doi:10.1006/jmcc.1993.1162 · Cited by 587
Petronilli, V., Costantini, P., Scorrano, L., Colonna, R., Passamonti, S., & Bernardi, P. (1994) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)89437-1 · Cited by 533
Self-citationMitochondrial dysfunction and apoptosis in myopathic mice with collagen VI deficiency
Irwin, W., Bergamin, N., Sabatelli, P., Reggiani, C., Megighian, A., Merlini, L., Braghetta, P., Columbaro, M., Volpin, D., Bressan, G. M., et al. (2003) · Nature Genetics · doi:10.1038/ng1270 · Cited by 509
Self-citationNicolli, A., Basso, E., Petronilli, V., Wenger, R. M., & Bernardi, P. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.4.2185 · Cited by 482
Self-citationBernardi, P. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)50355-6 · Cited by 449
Self-citationFriberg, H., Ferrand-Drake, M., Bengtsson, F., Halestrap, A. P., & Wieloch, T. W. (1998) · Journal of Neuroscience · doi:10.1523/jneurosci.18-14-05151.1998 · Cited by 366
Regulation of the Permeability Transition Pore in Skeletal Muscle Mitochondria
Fontaine, E. M., Eriksson, O., Ichas, F., & Bernardi, P. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.20.12662 · Cited by 358
Self-citationAction of cyclosporine on mitochondrial calcium fluxes
Fournier, N., Ducet, G., & Crevat, A. D. (1987) · Journal of Bioenergetics and Biomembranes · doi:10.1007/bf00762419 · Cited by 340
On the involvement of a cyclosporin A sensitive mitochondrial pore in myocardial reperfusion injury
Duchen, M. R., McGuinness, O. M., Brown, L. A., & Crompton, M. (1993) · Cardiovascular Research · doi:10.1093/cvr/27.10.1790 · Cited by 294
Pastorino, J. G., Snyder, J. W., Serroni, A., Hoek, J. B., & Farber, J. L. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)85172-4 · Cited by 292
Endotoxin-induced mitochondrial damage correlates with impaired respiratory activity
Crouser, E. D., JULIAN, M. W., Blaho, D. V., & Pfeiffer, D. R. (2002) · Critical Care Medicine · doi:10.1097/00003246-200202000-00002 · Cited by 277
A Ubiquinone-binding Site Regulates the Mitochondrial Permeability Transition Pore
Fontaine, E. M., Ichas, F., & Bernardi, P. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.40.25734 · Cited by 273
Self-citationOkonkwo, D. O., & Povlishock, J. T. (1999) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1097/00004647-199904000-00010 · Cited by 263
Imberti, R., Nieminen, A. L., Herman, B. A., & Lemasters, J. J. (1993) · Journal of Pharmacology and Experimental Therapeutics · doi:10.1016/s0022-3565(25)38135-8 · Cited by 219
Matsumoto, S., Friberg, H., Ferrand-Drake, M., & Wieloch, T. W. (1999) · Journal of Cerebral Blood Flow & Metabolism · doi:10.1097/00004647-199907000-00002 · Cited by 215
Cyclosporin A limits calcium-induced axonal damage following traumatic brain injury
Okonkwo, D. O., Büki, A., Siman, R. G., & Povlishock, J. T. (1999) · Neuroreport · doi:10.1097/00001756-199902050-00026 · Cited by 198
Nicolli, A., Petronilli, V., & Bernardi, P. (1993) · Biochemistry · doi:10.1021/bi00067a039 · Cited by 196
Self-citationBergsma, D. J., Eder, C., Gross, M. S., Kersten, H., Sylvester, D., Appelbaum, E. R., Cusimano, D. M., Livi, G. P., McLaughlin, M. M., & Kasyan, K. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)54484-7 · Cited by 190
Mitochondrial Targeted Cyclophilin D Protects Cells from Cell Death by Peptidyl Prolyl Isomerization
Lin, D.-T., & Lechleiter, J. D. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m112035200 · Cited by 181
Calcium transport in mitochondria
Selwyn, M. J., Dawson, A. P., & Dunnett, S. J. (1970) · FEBS Letters · doi:10.1016/0014-5793(70)80402-1 · Cited by 161
Halestrap, A. P. (1991) · Biochemical Journal · doi:10.1042/bj2780715 · Cited by 151
Posttreatment with the immunosuppressant cyclosporin A in transient focal ischemia
Yoshimoto, T., & Siesjö, B. K. (1999) · Brain Research · doi:10.1016/s0006-8993(99)01733-3 · Cited by 143
Feldmann, G., Haouzi, D., Moreau, A., Durand‐Schneider, A., Bringuier, A. F., Berson, A., Mansouri, A., Fau, D., & Pessayre, D. (2000) · Hepatology · doi:10.1002/hep.510310318 · Cited by 138
Lenartowicz, E., Bernardi, P., & AZZONE, G. F. (1991) · Journal of Bioenergetics and Biomembranes · doi:10.1007/bf00785817 · Cited by 115
Self-citationLi, P.-A., Uchino, H., Elmér, E., & Siesjö, B. K. (1997) · Brain Research · doi:10.1016/s0006-8993(97)00005-x · Cited by 114
Intrathecal cyclosporin prolongs survival of late-stage ALS mice
Keep, M. F., Elmér, E., Fong, K. S. K., & Csiszár, K. (2001) · Brain Research · doi:10.1016/s0006-8993(01)02012-1 · Cited by 114
Cyclosporin A protects hepatocytes subjected to high Ca2+ and oxidative stress
Broekemeier, K. M., Carpenter-Deyo, L. J., Reed, D. J., & Pfeiffer, D. R. (1992) · FEBS Letters · doi:10.1016/0014-5793(92)80616-o · Cited by 95
Davidson, A. M., & Halestrap, A. P. (1990) · Biochemical Journal · doi:10.1042/bj2680147 · Cited by 88
Soriano, M. E., Nicolosi, L., & Bernardi, P. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m405297200 · Cited by 76
Self-citationFolbergrová, J., Li, P., Uchino, H., Smith, M., & Siesjö, B. K. (1997) · Experimental Brain Research · doi:10.1007/pl00005622 · Cited by 72
Klöhn, P., Soriano, M. E., Irwin, W., Penzo, D., Scorrano, L., Bitsch, A., Neumann, H., & Bernardi, P. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1633614100 · Cited by 64
Self-citationMitochondrial permeability transition as a novel principle of hepatorenal toxicity in vivo
Haouzi, D., COHEN, I. R., Vieira, H. L. A., Poncet, D., Boya, P., Castedo, M., Vadrot, N., Belzacq, A.-S., Fau, D., Brenner, C., et al. (2002) · APOPTOSIS · doi:10.1023/a:1020026923038 · Cited by 61
Ferrand-Drake, M., Friberg, H., & Wieloch, T. W. (1999) · Neuroscience · doi:10.1016/s0306-4522(98)00559-4 · Cited by 58
Zoeteweij, J. P., van de Water, B., de Bont, H. J., Mulder, G. J., & Nagelkerke, J. F. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)53705-4 · Cited by 52
Snyder, J. W., Pastorino, J. G., Attie, A. M., & Farber, J. L. (1992) · Biochemical Pharmacology · doi:10.1016/0006-2952(92)90425-i · Cited by 40
Durability of remission after ABMT for NHL: the importance of the 2-year evaluation point
Bolwell, B. J., Goormastic, M., & Andresen, S. (1997) · Bone Marrow Transplantation · doi:10.1038/sj.bmt.1700678 · Cited by 17
Research works printed but not linked: 3
- Imberti, 1993, J. Pharmacol. Exp. Ther., 265, 392
- Crompton, 1988, Biochem. J., 255, 357
- Basso, 2004, Biophys. J., 86, 357A
Cited by
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Mitochondrial Reactive Oxygen Species (ROS) and ROS-Induced ROS Release
Zorov, D. B., Juhaszova, M., & Sollott, S. J. (2014) · Physiological Reviews · doi:10.1152/physrev.00026.2013 · Cited by 5,383
Mitochondrial membrane permeabilization in cell death
Kroemer, G., Galluzzi, L., & Brenner, C. (2007) · Physiological Reviews · doi:10.1152/physrev.00013.2006 · Cited by 3,598
Regulated necrosis: the expanding network of non-apoptotic cell death pathways
Berghe, T. V., Linkermann, A., Jouan-Lanhouet, S., Walczak, H., & Vandenabeele, P. (2014) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3737 · Cited by 1,735
Selective degradation of mitochondria by mitophagy
Kim, I., Rodriguez-Enriquez, S., & Lemasters, J. J. (2007) · Archives of Biochemistry and Biophysics · doi:10.1016/j.abb.2007.03.034 · Cited by 1,558
Metadata
- Authors
- Basso, E., Fante, L., Fowlkes, J., Petronilli, V., Forte, M. A., & Bernardi, P.
- Affiliations
- University of Padua (IT)
- Oregon Health & Science University (US)
- Corresponding author
- Forte, Michael A.
- Bernardi, Paolo
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2005-05
- Volume
- 280
- Issue
- 19
- Pages
- 18558-18561
- ISSN
- 0021-9258 (ISSN-L)
- OpenAlex
- W1971608015
- Cited by
- 808
- References
- 44
- Citations by year
- 2026: 10 · 2025: 12 · 2024: 11 · 2023: 21 · 2022: 20 · 2021: 32 · 2020: 27 · 2019: 31 · 2018: 35 · 2017: 36 · 2016: 34 · 2015: 45 · 2014: 71 · 2013: 36 · 2012: 48
- FWCI
- 19.20
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Padua Research Archive (University of Padova) (submittedVersion, cc-by)
- INFM-OAR (INFN Catania) (submittedVersion, cc-by)
- Funders
- National Institute of General Medical Sciences (R01GM069883, GM 69883)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Signaling Pathways in Disease
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › ATP Synthase and ATPases Research
- Keywords
- mitochondrial permeability transition pore, cyclophilin D, cyclosporine, calcium sensitivity, calcium retention capacity, mitochondrial permeability transition, proton gradient, adenine nucleotides, liver mitochondria
- MeSH terms
- Peptidyl-Prolyl Isomerase F, Alleles, Animals, Calcium, Carbonyl Cyanide p-Trifluoromethoxyphenylhydrazone, Diamide, Electrochemistry, Hydrogen-Ion Concentration, Liver, Mice, Inbred C57BL, Mice, Transgenic, Mitochondria, Mitochondria, Liver, Models, Genetic, Oxygen, Oxygen Consumption, Permeability, Protons, Benzoquinones, Cyclosporine, Oxidative Stress, Cyclophilins, Mitochondrial Proteins, Mice
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