Acetogenesis in Deep Subseafloor Sediments of The Juan de Fuca Ridge Flank: A Synthesis of Geochemical, Thermodynamic, and Gene-based Evidence

Reinekea marinisedimentorum gen. nov., sp. nov., a novel gammaproteobacterium from marine coastal sediments

Romanenko, L. A., Schümann, P., Rohde, M., Mikhailov, V. V., & Stackebrandt, E. S. (2004) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.02846-0 · Cited by 56

Physiology of the thermophilic acetogen Moorella thermoacetica

Drake, H. L., & Daniel, S. L. (2004) · Research in Microbiology · doi:10.1016/j.resmic.2004.03.003 · Cited by 55

A new H2/CO2-using acetogenic bacterium from the rumen: Description of Ruminococcus schinkii sp. nov.

Rieu-Lesme, F. (1996) · FEMS Microbiology Letters · doi:10.1016/0378-1097(96)00195-4 · Cited by 54

Acetobacterium tundrae sp. nov., a new psychrophilic acetogenic bacterium from tundra soil

Simankova, M. V., Kotsyurbenko, O. R., Stackebrandt, E. S., Kostrikina, N. A., Lysenko, A. M., Osipov, G. A., & Nozhevnikova, A. N. (2000) · Archives of Microbiology · doi:10.1007/s002030000229 · Cited by 54

Bioconversion of Cellulose to Acetate with Pure Cultures of Ruminococcus albus and a Hydrogen-Using Acetogen

Miller, T. L., & Wolin, M. J. (1995) · Applied and Environmental Microbiology · doi:10.1128/aem.61.11.3832-3835.1995 · Cited by 53

Formyltetrahydrofolate Synthetase Sequences from Salt Marsh Plant Roots Reveal a Diversity of Acetogenic Bacteria and Other Bacterial Functional Groups

Leaphart, A. B., Friez, M. J., & Lovell, C. (2003) · Applied and Environmental Microbiology · doi:10.1128/aem.69.1.693-696.2003 · Cited by 52

Acetogenesis from H2 and CO2 by methane- and non-methane-producing human colonic bacterial communities

Bernalier, A., Lelait, M., Rochet, V., Grivet, J., Gibson, G. R., & Durand, M. (1996) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.1996.tb00212.x · Cited by 52

A Gram-Negative Anaerobic Bacterium That Utilizes O -Methyl Substituents of Aromatic Acids

Frazer, A. C., & Young, L. Y. (1985) · Applied and Environmental Microbiology · doi:10.1128/aem.49.5.1345-1347.1985 · Cited by 51

Isolation and characterization of a carbon monoxide utilizing strain of the acetogen Peptostreptococcus productus

Geerligs, G., Aldrich, H. C., Harder, W., & Diekert, G. B. (1987) · Archives of Microbiology · doi:10.1007/bf00456709 · Cited by 51

Radiocarbon and stable carbon isotope compositions of organic compound classes in sediments from the NE Pacific and Southern Oceans

Wang, X.-C., & Druffel, E. R. M. (2001) · Marine Chemistry · doi:10.1016/s0304-4203(00)00090-6 · Cited by 49

Anaerobic carbon transformation: experimental studies with flow-through cells

Brüchert, V., & Arnosti, C. (2003) · Marine Chemistry · doi:10.1016/s0304-4203(02)00119-6 · Cited by 49

Re-examination of thee metabolic potentials of the acetogensClostridium aceticumandClostridium formicoaceticum: chemolithoautotrophic and aromatic-dependent growth

Lux, M. F., & Drake, H. L. (1992) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1992.tb05341.x · Cited by 46

Community‐Level Analysis: Key Genes of CO2‐Reductive Acetogenesis

Lovell, C. R., & Leaphart, A. B. (2005) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(05)97028-6 · Cited by 46

Desulfosporomusa polytropa gen. nov., sp. nov., a novel sulfate-reducing bacterium from sediments of an oligotrophic lake

Sass, H., Overmann, J., R�tters, H., Babenzien, H., & Cypionka, H. (2004) · Archives of Microbiology · doi:10.1007/s00203-004-0703-3 · Cited by 46

Carbon monoxide pathway enzyme activities in a thermophilic anaerobic bacterium grown acetogenically and in a syntrophic acetate-oxidizing coculture

Lee, M. J., & Zinder, S. H. (1988) · Archives of Microbiology · doi:10.1007/bf00408241 · Cited by 46

H2/CO2Metabolism in Acetogenic Bacteria Isolated From the Human Colon

Leclerc, M., Bernalier, A., Donadille, G., & Lelait, M. (1997) · Anaerobe · doi:10.1006/anae.1997.0117 · Cited by 46

Bacterial activity and production in near-surface estuarine and freshwater sediments

Wellsbury, P., Herbert, R. A., & Parkes, R. J. (1996) · FEMS Microbiology Ecology · doi:10.1016/0168-6496(96)00006-2 · Cited by 45

Design and testing of a functional group-specific DNA probe for the study of natural populations of acetogenic bacteria

Lovell, C. R., & Hui, Y. Y. (1991) · Applied and Environmental Microbiology · doi:10.1128/aem.57.9.2602-2609.1991 · Cited by 45

Isolation and characterization of two new homoacetogenic hydrogen-utilizing bacteria from the human intestinal tract that are closely related to Clostridium coccoides

Kamlage, B., Gruhl, B., & Blaut, M. (1997) · Applied and Environmental Microbiology · doi:10.1128/aem.63.5.1732-1738.1997 · Cited by 44

Marinomonas primoryensis sp. nov., a novel psychrophile isolated from coastal sea-ice in the Sea of Japan

Romanenko, L. A., Uchino, M., Mikhailov, V. V., Zhukova, N. V., & Uchimura, T. (2003) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.02280-0 · Cited by 44

Clostridium coccoides, a New Species from the Feces of Mice

Kaneuchi, C., Benno, Y., & MITSUOKA, T. (1976) · International Journal of Systematic Bacteriology · doi:10.1099/00207713-26-4-482 · Cited by 43

Contribution of dissolved organic species to the carbon and energy budgets of hydrate bearing deep sea sediments (Ocean Drilling Program Site 997 Blake Ridge)

Egeberg, P. K., & Barth, T. (1998) · Chemical Geology · doi:10.1016/s0009-2541(98)00033-3 · Cited by 43

Isolation of a cinnamic acid-metabolizing Clostridium glycolicum strain from oil mill wastewaters and emendation of the species description.

Chamkha, M., Labat, M., Patel, B. K. C., & Garcia, J. L. (2001) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/00207713-51-6-2049 · Cited by 43

SELECTIVE ENRICHMENT OF FACULTATIVELY CHEMOLITHOTROPHIC THIOBACILLI AND RELATED ORGANISMS IN CONTINUOUS CULTURE

Gottschal, J. C., & Kuenen, J. G. (1980) · FEMS Microbiology Letters · doi:10.1111/j.1574-6941.1980.tb01635.x · Cited by 43

Organic carbon isotopic composition of phytoplankton and sea-surface pCO2 reconstructions in the Southern Indian Ocean during the last 50,000 yr

Bentaleb, I., Fontugne, M., Descolas-Gros, C., Girardin, C., Mariotti, A. A., Pierre, C., Brunet, C., & Alain Poisson, B. (1996) · Organic Geochemistry · doi:10.1016/0146-6380(96)00043-5 · Cited by 42

Culturable Populations of Sporomusa spp. and Desulfovibrio spp. in the Anoxic Bulk Soil of Flooded Rice Microcosms

Rosencrantz, D., Rainey, F. A., & Janssen, P. H. (1999) · Applied and Environmental Microbiology · doi:10.1128/aem.65.8.3526-3533.1999 · Cited by 41

Marinomonas ushuaiensis sp. nov., isolated from coastal sea water in Ushuaia, Argentina, sub-Antarctica

Prabagaran, S. R., Suresh, K. N., Manorama, R., Delille, D., & Shivaji, S. (2005) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.63363-0 · Cited by 41

Diversity of H 2 /CO 2 -Utilizing Acetogenic Bacteria from Fecesof Non-Methane-Producing Humans

Bernalier, A., Rochet, V., Leclerc, M., Dore, J. M., & Pochart, P. (1996) · Current Microbiology · doi:10.1007/s002849900081 · Cited by 41

Ether-cleaving enzyme and diol dehydratase involved in anaerobic polyethylene glycol degradation by a new Acetobacterium sp.

Schramm, E., & Schink, B. (1991) · Biodegradation · doi:10.1007/bf00114597 · Cited by 39

Marinomonas pontica sp. nov., isolated from the Black Sea

Ivanova, E. P. (2005) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.63326-0 · Cited by 39

Bacterial strains from human feces that reduce CO2 to acetic acid

Wolin, M. J., & Miller, T. L. (1993) · Applied and Environmental Microbiology · doi:10.1128/aem.59.11.3551-3556.1993 · Cited by 37

Acetogenesis coupled to the oxidation of aromatic aldehyde groups

G��ner, A., Daniel, S. L., & Drake, H. L. (1994) · Archives of Microbiology · doi:10.1007/bf00276472 · Cited by 37

Marinomonas dokdonensis sp. nov., isolated from sea water

Yoon, J., Kang, S.-J., & Oh, T.-K. (2005) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.63830-0 · Cited by 37

Taxonomic Relationships in the Genus Proteus

Rustigian, R., & Stuart, C. A. (1943) · Experimental Biology and Medicine · doi:10.3181/00379727-53-14265 · Cited by 36

Cold-active acetogenic bacteria from surficial sediments of perennially ice-covered Lake Fryxell, Antarctica

Sattley, W. M., & Madigan, M. T. (2007) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.2007.00737.x · Cited by 35

Anaerobic degradation of methoxylated aromatic compounds by Clostridium methoxybenzovorans and a nitrate-reducing bacterium Thauera sp. strain Cin3,4

Mechichi, T., Patel, B. K. C., & Sayadi, S. (2005) · International Biodeterioration & Biodegradation · doi:10.1016/j.ibiod.2005.09.001 · Cited by 35

Marinomonas aquamarina sp. nov., isolated from oysters and seawater

Macián, M. C., Arahal, D. R., Garay, E., & Pujalte, M. J. (2005) · Systematic and Applied Microbiology · doi:10.1016/j.syapm.2004.12.003 · Cited by 32

Acetogenesis from CO2 in the Human Colonic Ecosystem

Wolin, M. J., & Miller, T. L. (1994) · Springer eBooks · doi:10.1007/978-1-4615-1777-1_13 · Cited by 30

Fermentation of methoxyacetate to glycolate and acetate by newly isolated strains of Acetobacterium sp.

Schuppert, B., & Schink, B. (1990) · Archives of Microbiology · doi:10.1007/bf00247821 · Cited by 30

Features of a Clostridium, strain CV-AA1, an obligatory anaerobic bacterium producing acetic acid from methanol

Adamse, A. D., & Velzeboer, C. T. M. (1982) · Antonie van Leeuwenhoek · doi:10.1007/bf00418284 · Cited by 30

Utilization of methoxylated benzoates and formation of intermediates by Desulfotomaculum thermobenzoicum in the presence or absence of sulfate

Tasaki, M., Kamagata, Y., Nakamura, K., & Mikami, E. (1992) · Archives of Microbiology · doi:10.1007/bf00245151 · Cited by 29

Marinomonas polaris sp. nov., a psychrohalotolerant strain isolated from coastal sea water off the subantarctic Kerguelen islands

Gupta, P., Chaturvedi, P., Pradhan, S., Delille, D., & Shivaji, S. (2006) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.63921-0 · Cited by 28

Rough Basement Transect (Sites 1026 and 1027)

Party, S. S. (1997) · doi:10.2973/odp.proc.ir.168.105.1997 · Cited by 28

Fermentation of triacetin and glycerol by Acetobacterium sp. No energy is conserved by acetate excretion

Emde, R., & Schink, B. (1987) · Archives of Microbiology · doi:10.1007/bf00425080 · Cited by 27

Replacement of NCTC 4175, the Current Type Strain of Proteus vulgaris, with ATCC 29905: Request for an Opinion

Brenner, D. J., Hickman-Brenner, F. W., HOLMES, B., Hawkey, P. M., Penner, J. L., Grimont, P. A. D., & O'Hara, C. M. (1995) · International Journal of Systematic Bacteriology · doi:10.1099/00207713-45-4-870 · Cited by 27

Vitamin B2 production by Acetobacterium sp. and its tetrachloromethane-resistant mutants

Inoue, K., Kageyama, S., Miki, K., Morinaga, T., Kamagata, Y., Nakamura, K., & Mikami, E. (1992) · Journal of Fermentation and Bioengineering · doi:10.1016/0922-338x(92)90238-p · Cited by 27

Fermentative degradation of triethanolamine by a homoacetogenic bacterium

Frings, J., Wondrak, C., & Schink, B. (1994) · Archives of Microbiology · doi:10.1007/bf00264381 · Cited by 26

Bidirectional usage of ferulate by the acetogen Peptostreptococcus productus U-1: CO2 and aromatic acrylate groups as competing electron acceptors

Misoph, M., Daniel, S. L., & Drake, H. L. (1996) · Microbiology · doi:10.1099/13500872-142-8-1983 · Cited by 26

Growth kinetics of Acetobacterium sp. on methanol-formate in continuous culture

Bainotti, A. E., & Nishio, N. (2000) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.2000.00854.x · Cited by 25

Isolation from the Rumen of a New Acetogenic Bacterium Phylogenetically Closely Related toClostridium difficile

Rieu-Lesme, F., Dauga, C., Fonty, G., & Dore, J. M. (1998) · Anaerobe · doi:10.1006/anae.1998.0153 · Cited by 25

Isolation and characterization of a new hydrogen-utilizing bacterium from the rumen

Rieu-Lesme, F., Fonty, G., & Doré, J. (1995) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1995.tb07338.x · Cited by 24

Thermoplasmatales

Huber, H., & STETTER, K. O. (2006) · Springer eBooks · doi:10.1007/0-387-30743-5_7 · Cited by 24

Reinekea blandensis sp. nov., a marine, genome-sequenced gammaproteobacterium

Pinhassi, J., Pujalte, M. J., Macián, M. C., Lekunberri, I., González, J. M., Pedrós‐Alió, C., & Arahal, D. R. (2007) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.65091-0 · Cited by 23

Acetogenic coccoid spore-forming bacteria isolated from the rumen

Rieu-Lesme, F., Dauga, C., Morvan, B., Bouvet, O. M. M., Grimont, P. A. D., & Dore, J. M. (1996) · Research in Microbiology · doi:10.1016/s0923-2508(97)85122-4 · Cited by 23

CO Fermentation of Eubacterium limosum KIST612

Chang, I. S., Kim, D., Kim, B.-H., Shin, P.-K., Sung, H., & Lovitt, R. W. (1998) · Journal of Microbiology and Biotechnology · Cited by 23

Demethylation of aromatic compounds by strain B10 and complete degradation of 3-methoxybenzoate in co-culture with Desulfosarcina strains

Sembiring, T., & Winter, J. U. (1990) · Applied Microbiology and Biotechnology · doi:10.1007/bf00176531 · Cited by 21

Fermentation of mandelate to benzoate and acetate by a homoacetogenic bacterium

D�rner, C., & Schink, B. (1991) · Archives of Microbiology · doi:10.1007/bf00263002 · Cited by 21

Characterization of the psychrotolerant acetogen strain SyrA5 and the emended description of the species Acetobacterium carbinolicum

Paarup, M., Friedrich, M. W., Tindall, B. J., & Finster, K. W. (2005) · Antonie van Leeuwenhoek · doi:10.1007/s10482-005-9009-y · Cited by 20

Fermentation of phenoxyethanol to phenol and acetate by a homoacetogenic bacterium

Frings, J., & Schink, B. (1994) · Archives of Microbiology · doi:10.1007/bf00314475 · Cited by 19

Thermodynamic Ecology of Hydrogen-Based Syntrophy

Valentine, D. L. (2006) · Kluwer Academic Publishers eBooks · doi:10.1007/0-306-48173-1_9 · Cited by 16

13C-NMR study of glucose and pyruvate catabolism in four acetogenic species isolated from the human colon

Leclerc, M., Bernalier, A., Lelait, M., & Grivet, J. (2006) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1997.tb10193.x · Cited by 13

Anaerobic degradation of o-phenylphenol by mixed and pure cultures

Sembiring, T., & Winter, J. U. (1989) · Applied Microbiology and Biotechnology · doi:10.1007/bf00252534 · Cited by 13

Growth on methanol and conversion of methoxylated aromatic substrates by Desulfotomaculum orientis in the presence and absence of sulfate

Hanselmann, K. W., Kaiser, J. ‐., Wenk, M., Schön, R., & Bachofen, R. (1995) · Microbiological Research · doi:10.1016/s0944-5013(11)80021-2 · Cited by 10

Données récentes sur les microbes anaérobies et leur rôle en pathologie

Weinberg, M., & Ginsbourg, B. (1927) · Biblioteca Digital (Real Academia Nacional de Medicina) · Cited by 8

Microbial Ecology of the Dark Ocean above, at, and below the Seafloor

Orcutt, B. N., Sylvan, J. B., Knab, N. J., & Edwards, K. J. (2011) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00039-10 · Cited by 692

Genomic and enzymatic evidence for acetogenesis among multiple lineages of the archaeal phylum Bathyarchaeota widespread in marine sediments

He, Y., Li, M., Perumal, V., Feng, X., Fang, J., Xie, J., Sievert, S. M., & Wang, F. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.35 · Cited by 340

A review of prokaryotic populations and processes in sub-seafloor sediments, including biosphere:geosphere interactions

Parkes, R. J., Cragg, B. A., Roussel, E. G., Webster, G., Weightman, A. J., & Sass, H. (2014) · Marine Geology · doi:10.1016/j.margeo.2014.02.009 · Cited by 311

Early bioenergetic evolution

Sousa, F. L., Thiergart, T., Landan, G., Nelson-Sathi, S., Pereira, I. A. C., Allen, J. F., Lane, N., & Martin, W. F. (2013) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2013.0088 · Cited by 286

Energetics and Application of Heterotrophy in Acetogenic Bacteria

Schuchmann, K., & Müller, V. (2016) · Applied and Environmental Microbiology · doi:10.1128/aem.00882-16 · Cited by 297

Origin and fate of acetate in an acidic fen

Hädrich, A., Heuer, V. B., Herrmann, M., Hinrichs, K., & Küsel, K. (2012) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2012.01352.x · Cited by 43

Acetogenesis from CO2 in an anoxic marine sediment

Hoehler, T. M., Albert, D. B., Alperin, M. J., & Martens, C. S. (1999) · Limnology and Oceanography · doi:10.4319/lo.1999.44.3.0662 · Cited by 82

Acetate-oxidizing sulfate reduction in anoxic marine sediments.

Kondo, R., Nishijima, T., & Hata, Y. (1990) · Bulletin of Japanese Society of Microbial Ecology · doi:10.1264/microbes1986.5.29 · Cited by 6

Acetogenesis in the Energy-Starved Deep Biosphere – A Paradox?

Lever, M. A. (2012) · Frontiers in Microbiology · doi:10.3389/fmicb.2011.00284 · Cited by 147

Ancient Metabolisms of a Thermophilic Subseafloor Bacterium

Smith, A. R., Mueller, R., Fisk, M. R., & Colwell, F. S. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.764631 · Cited by 5