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Biomarkers of Human Gut Microbiota Diversity and Dysbiosis

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TAM mediates adaptation of carbapenem-resistant Klebsiella pneumoniae to antimicrobial stress during host colonization and infection

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Nutrition of Escherichia coli within the intestinal microbiome

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Harnessing the human gut microbiota: an emerging frontier in combatting multidrug-resistant bacteria

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Role of gut microbiota in travel-related acquisition of extended spectrum β-lactamase-producing Enterobacteriaceae

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A Modern-World View of Host–Microbiota–Pathogen Interactions

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Impact of childhood malnutrition and intestinal microbiota on MDR infections

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Microbiota-derived small molecule genotoxins: host interactions and ecological impact in the gut ecosystem

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The Mucosally-Adherent Rectal Microbiota Contains Features Unique to Alcohol-Related Cirrhosis

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Impact of Antibiotic-Resistant Bacteria on Immune Activation and Clostridioides difficile Infection in the Mouse Intestine

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Vancomycin-resistant enterococci utilise antibiotic-enriched nutrients for intestinal colonisation

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Bacterial diversity and specific taxa are associated with decolonization of carbapenemase-producing enterobacterales after fecal microbiota transplantation

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Multimodal analysis identifies microbiome changes linked to stem cell transplantation-associated diseases

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Enterocloster clostridioformis protects against Salmonella pathogenesis and modulates epithelial and mucosal immune function

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Gut microbiota alterations in critically Ill patients with carbapenem-resistant Enterobacteriaceae colonization: A clinical analysis

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Systemic inflammatory response to daily exposure to microcystin-LR and the underlying gut microbial mechanisms

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The Kidney–Gut–Muscle Axis in End-Stage Renal Disease is Similarly Represented in Older Adults

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A Comprehensive Review of Fortification, Bioavailability, and Health Benefits of Folate

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The Klebsiella pneumoniae ter Operon Enhances Stress Tolerance

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Formate oxidation in the intestinal mucus layer enhances fitness of Salmonella enterica serovar Typhimurium

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Dysregulation of intestinal flora: excess prepackaged soluble fibers damage the mucus layer and induce intestinal inflammation

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A Comprehensive Review Exploring the Protective Role of Specific Commensal Gut Bacteria against Salmonella

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Prebiotic galactooligosaccharide feed modifies the chicken gut microbiota to efficiently clear Salmonella

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Positive Synergistic Effects of Quercetin and Rice Bran on Human Gut Microbiota Reduces Enterobacteriaceae Family Abundance and Elevates Propionate in a Bioreactor Model

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Use of the β-Glucan-Producing Lactic Acid Bacteria Strains Levilactobacillus brevis and Pediococcus claussenii for Sourdough Fermentation—Chemical Characterization and Chemopreventive Potential of In Situ-Enriched Wheat and Rye Sourdoughs and Breads

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What are the missing pieces needed to stop antibiotic resistance?

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Mechanisms conferring multi-layered protection against intestinal Salmonella Typhimurium infection

Kroon, S., & Hardt, W. (2025) · FEMS Microbiology Reviews · doi:10.1093/femsre/fuaf038 · Cited by 14

Cervicovaginal bacterial communities in reproductive-aged Tanzanian women withSchistosoma mansoni,Schistosoma haematobium, or without schistosome infection

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Urease in acetogenic Lachnospiraceae drives urea carbon salvage in SCFA pools

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Dietary amino acids regulate Salmonella colonization via microbiota-dependent mechanisms in the mouse gut

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Study on Significance of Receptor Targeting in Killing of Intracellular Bacteria with Membrane‐Impermeable Antibiotics

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Inferring early-life host and microbiome functions by mass spectrometry-based metaproteomics and metabolomics

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Bifidobacterium breve BBG-001 and intestinal barrier function in preterm babies: Exploratory Studies from the PiPS Trial

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The Gut Microbiota Contributes to Systemic Responses and Liver Injury in Gut-Derived Sepsis

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Anti-biofilm and anti-virulence potential of cell free supernatant of Akkermansia muciniphila against Salmonella

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The Role of the Gut, Urine, and Vaginal Microbiomes in the Pathogenesis of Urinary Tract Infection in Women and Consideration of Microbiome Therapeutics

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Infections in decompensated cirrhosis: Pathophysiology, management, and research agenda

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Leveraging strain competition to address antimicrobial resistance with microbiota therapies

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Ecology of the gut microbiota and colonization resistance: mechanisms and therapeutic implications

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Factors influencing gut microbial colonization: A host-microbe-environment interaction perspective

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Intestinal microbiology and urinary tract infection associated risk in long-term aged care residents

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Leveraging the microbiome in the treatment of sepsis: potential pitfalls and new perspectives

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Composition and Function of Gut Microbiome: From Basic Omics to Precision Medicine

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Microbe-Metabolite Associations Linked to the Rebounding Murine Gut Microbiome Postcolonization with Vancomycin-Resistant Enterococcus faecium

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Fingerprinting and characterization of the polysaccharides from Polygonatum odoratum and the in vitro fermented effects on Lactobacillus johnsonii

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In vitro and in vivo activity of new strains of Bacillus subtilis against ESBL-producing Escherichia coli: an experimental study

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Translation of Microbiota Short-Chain Fatty Acid Mechanisms Affords Anti-infective Acyl-Salicylic Acid Derivatives

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Co-colonization of different species harboring KPC or NDM carbapenemase in the same host gut: insight of resistance evolution by horizontal gene transfer

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Lantibiotic-producing bacteria impact microbiome resilience and colonization resistance

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Dynamic effects of probiotic formula ecologic®825 on human small intestinal ileostoma microbiota: a network theory approach

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Gut microbiome diversity and composition in individuals with and without extended-spectrum β-lactamase-producing Enterobacterales carriage: a matched case–control study in infectious diseases department

Boyd, A. C., Dani, M. E., Ajrouche, R., Démontant, V., Cheval, J., Lacombe, K., Cosson, G., Rodriguez, C., Pawlotsky, J., Woerther, P., et al. (2024) · Clinical Microbiology and Infection · doi:10.1016/j.cmi.2024.03.016 · Cited by 9

Prognostic Significance of the Relative Load of KPC-Producing Klebsiella pneumoniae within the Intestinal Microbiota in a Prospective Cohort of Colonized Patients

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Fecal Butyrate and Deoxycholic Acid Concentrations Correlate With Mortality in Patients With Liver Disease

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Propionylation of lysine, a new mechanism of short-chain fatty acids affecting bacterial virulence.

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Intestinal carbapenem-resistant Klebsiella pneumoniae undergoes complex transcriptional reprogramming following immune activation

David, C. N., Czauderna, A., Cheng, L., Lagune, M., Jung, H.-J., Kim, S. G., Pamer, E. G., Prados, J., Chen, L., & Becattini, S. (2024) · Gut Microbes · doi:10.1080/19490976.2024.2340486 · Cited by 11

A high-sucrose diet causes microbiota composition shift and promotes the susceptibility of mice to Salmonella Typhimurium infection

Liu, J., Liu, H., Teng, Y., Qin, N., Ren, X., & Xia, X. (2023) · Food & Function · doi:10.1039/d2fo03467k · Cited by 9

Research advances on short-chain fatty acids in gastrointestinal acute graft- versus -host disease

Song, X., Lao, J., Wang, L., & Liu, S. (2024) · Therapeutic Advances in Hematology · doi:10.1177/20406207241237602 · Cited by 9

Efficacy of an inulin-based treatment on intestinal colonization by multidrug-resistant E. coli: insight into the mechanism of action

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Klebsiella ARO112 promotes microbiota recovery, pathobiont clearance and prevents inflammation in IBD mice

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An adapted method for Cas9-mediated editing reveals the species-specific role of β-glucoside utilization driving competition between Klebsiella species

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The role of gut microbiota associated metabolites in digestive disorders

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畜牧业来源的抗生素耐药大肠杆菌研究进展

李, 嘉., & 孙, 世. (2024) · Zìrán kēxué xuébào · doi:10.52810/cjns.2024.001 · Cited by 8

Fecal Microbiota Transplantation Commonly Failed in Children With Co‐Morbidities

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Comparative Study on the In Vitro Fermentation Characteristics of Three Plant-Derived Polysaccharides with Different Structural Compositions

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The Potential Role of the Gut Microbiota in Kidney Transplantation

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Relevance of the Adjuvant Effect between Cellular Homeostasis and Resistance to Antibiotics in Gram-Negative Bacteria with Pathogenic Capacity: A Study of Klebsiella pneumoniae

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Interacting roles of gut microbiota and T cells in the development of autoimmune hepatitis

Wu, Q., Ge, Z., Lv, C., & He, Q. (2025) · Frontiers in Immunology · doi:10.3389/fimmu.2025.1584001 · Cited by 7

Gut microbial community differentially characterizes patients with nonalcoholic fatty liver disease

Jee, J. J., Lim, J., Park, S., Koh, H., & Lee, H. W. (2022) · Journal of Gastroenterology and Hepatology · doi:10.1111/jgh.15903 · Cited by 7

Refocusing Human Microbiota Research in Infectious and Immune-mediated Diseases: Advancing to the Next Stage

Giovanni, M. Y., Schneider, J. S., Calder, T., & Fauci, A. S. (2020) · The Journal of Infectious Diseases · doi:10.1093/infdis/jiaa706 · Cited by 8

Listening in on the conversation between the human gut microbiome and its host

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Strain-level variation controls nutrient niche occupancy by health-associated Anaerostipes hadrus

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The human gut microbiome in enteric infections: from association to translation

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