Genetic Association of the R620W Polymorphism of Protein Tyrosine Phosphatase PTPN22 with Human SLE

Open access

Kyogoku, Chieko, Ortmann, Ward A., Lee, Annette, Selby, Scott, Carlton, Victoria E.H., Chang, Monica, Ramos, Paula, Baechler, Emily C., Batliwalla, Franak M., Novitzke, Jill, Williams, Adrienne H., Gillett, Clarence, Rodine, Peter, Graham, Robert R., Ardlie, Kristin G., Gaffney, Patrick M., Moser, Kathy L., Petri, Michelle, Begovich, Ann B., Gregersen, Peter K., Langefeld, Carl D., Behrens, Timothy W.·2004·The American Journal of Human Genetics

DOI 10.1086/423790

Open this paper in CoChat — free account

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

Integrity signals

Registry

Crossref · 10.1086/423790

Cites

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci
The International Consortium for Systemic Lupus Erythematosus Genetics (SLEGEN), Harley, J. B., Alarcón-Riquelme, M. E., Criswell, L. A., Jacob, C. O., Kimberly, R. P., Moser, K. L., Tsao, B. P., Vyse, T. J., & Langefeld, C. D. (2008) · Nature Genetics · doi:10.1038/ng.81 · Cited by 1,309
Self-citation
New IBD genetics: common pathways with other diseases
Lees, C. W., Barrett, J. C., Parkes, M., & Satsangi, J. (2011) · Gut · doi:10.1136/gut.2009.199679 · Cited by 635
Genetics of type 1A diabetes
Concannon, P., Rich, S. S., & Nepom, G. T. (2009) · New England Journal of Medicine · doi:10.1056/nejmra0808284 · Cited by 510
Immunogenetics of autoimmune thyroid diseases: a comprehensive review
Lee, H. J., Li, C. W., Hammerstad, S. S., Stefan, M., & Tomer, Y. (2015) · Journal of Autoimmunity · doi:10.1016/j.jaut.2015.07.009 · Cited by 351
Prediction and Pathogenesis in Type 1 Diabetes
Ziegler, A.-G., & Nepom, G. T. (2010) · Immunity · doi:10.1016/j.immuni.2010.03.018 · Cited by 346
PTPN22: the archetypal non-HLA autoimmunity gene
Stanford, S. M., & Bottini, N. (2014) · Nature Reviews Rheumatology · doi:10.1038/nrrheum.2014.109 · Cited by 227
Specific combinations of HLA-DR2 and DR3 class II haplotypes contribute graded risk for disease susceptibility and autoantibodies in human SLE
Graham, R. R., Ortmann, W., Rodine, P., Espe, K., Langefeld, C., Lange, E., Williams, A., Beck, S., Kyogoku, C., Moser, K., et al. (2007) · European Journal of Human Genetics · doi:10.1038/sj.ejhg.5201827 · Cited by 174
Self-citation
Modulation of TCR Signaling by Tyrosine Phosphatases: From Autoimmunity to Immunotherapy
Castro-Sanchez, P., Teagle, A. R., Prade, S., & Zamoyska, R. (2020) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2020.608747 · Cited by 44
Genetics of lupus nephritis
Lauwerys, B. R., & Wakeland, E. K. (2005) · Lupus · doi:10.1191/0961203305lu2052oa · Cited by 42
Susceptible loci associated with autoimmune disease as potential biomarkers for checkpoint inhibitor-induced immune-related adverse events
Hoefsmit, E. P., Rozeman, E. A., Haanen, J. B. A. G., & Blank, C. U. (2019) · ESMO Open · doi:10.1136/esmoopen-2018-000472 · Cited by 29
Analysis of PTPN 22, ZFAT and MYO 9B polymorphisms in Turner Syndrome and risk of autoimmune disease
Villanueva‐Ortega, E., Ahedo, B., Fonseca‐Sánchez, M. A., Pérez‐Durán, J., Garibay‐Nieto, N., Macías‐Galavíz, M. T., Trujillo‐Cabrera, Y., García‐Latorre, E., & Queipo, G. (2017) · International Journal of Immunogenetics · doi:10.1111/iji.12323 · Cited by 12

Authors: Kyogoku, C., Ortmann, W. A., Lee, A., Selby, S., Carlton, V. E. H., Chang, M., Ramos, P., Baechler, E. C., Batliwalla, F. M., Novitzke, J., Williams, A. H., Gillett, C., Rodine, P., Graham, R. R., Ardlie, K. G., Gaffney, P. M., Moser, K. L., Petri, M., Begovich, A. B., Gregersen, P. K., Langefeld, C. D., & Behrens, T. W.
Venue: The American Journal of Human Genetics
Publisher: Elsevier BV
Published: 2004-09
Volume: 75
Issue: 3
Pages: 504-507
ISSN: 0002-9297 (ISSN-L)
DOI: 10.1086/423790
OpenAlex: W2046383867
Cited by: 672
References: 0
FWCI: 36.60
Type: journal article
Language: en
Open access: bronze

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review