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The DOI matches its Crossref record; 102 of the 102 references it cites were found in a registry or an index.

Integrative Analysis of Cell Cycle Control in Budding Yeast

Open access
Chen, Katherine C., Calzone, Laurence, Csikasz-Nagy, Attila, Cross, Frederick R., Novak, Bela, Tyson, John J.·2004·Molecular Biology of the Cell

Abstract

The adaptive responses of a living cell to internal and external signals are controlled by networks of proteins whose interactions are so complex that the functional integration of the network cannot be comprehended by intuitive reasoning alone. Mathematical modeling, based on biochemical rate equations, provides a rigorous and reliable tool for unraveling the complexities of molecular regulatory networks. The budding yeast cell cycle is a challenging test case for this approach, because the control system is known in exquisite detail and its function is constrained by the phenotypic properties of >100 genetically engineered strains. We show that a mathematical model built on a consensus picture of this control system is largely successful in explaining the phenotypes of mutants described so far. A few inconsistencies between the model and experiments indicate aspects of the mechanism that require revision. In addition, the model allows one to frame and critique hypotheses about how the division cycle is regulated in wild-type and mutant cells, to predict the phenotypes of new mutant combinations, and to estimate the effective values of biochemical rate constants that are difficult to measure directly in vivo.

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Citations

Cites

Show all 102 references

Research works printed but not linked: 9

  1. Ciliberto, A., Novak, B., and Tyson, J.J. (2003). Mathematical model of the morphogenesis checkpoint in budding yeast. J. Cell Biol. 163 , 1243-1254. · doi:10.1083/jcb.200306139
  2. Edgington, N.P., and Futcher, B. (2001). Relationship between the function and the location of G1 cyclins in S. cerevisiae. J. Cell Sci. 114 , 4599-4611. · doi:10.1242/jcs.114.24.4599
  3. Greenwood, E., Nishitan, H., and Nurse, P. (1998). Cdc18p can block mitosis by two independent mechanisms. J. Cell Sci. 111 , 3101-3108. · doi:10.1242/jcs.111.20.3101
  4. Li, J.J. (1995). Once, and only once. Curr. Biol. 5 , 472-475. · doi:10.1016/s0960-9822(95)00094-7
  5. Moser, B.A., and Russell, P. (2000). Cell cycle regulation in Schizosaccharomyces pombe. Curr. Opin. Microbiol. 3 , 631-638. · doi:10.1016/s1369-5274(00)00152-1
  6. Novak, B., Pataki, Z., Ciliberto, A., and Tyson, J.J. (2001). Mathematical model of the cell division cycle of fission yeast. Chaos 11 , 277-286. · doi:10.1063/1.1345725
  7. Nurse, P. (1997). The Josef Steiner Lecture: CDKs and cell-cycle control in fission yeast: relevance to other eukaryotes and cancer. Int. J. Cancer 71 , 507-508. · doi:10.1002/(sici)1097-0215(19970529)71:5<707::aid-ijc1>3.0.co;2-v
  8. Thornton, B.R., Chen, K.C., Cross, F.R., Tyson, J.J., and Toczyski, D.P. (2004). Cycling without the cyclosome: modeling a yeast strain lacking the APC. Cell Cycle 3 , 629-633. · doi:10.4161/cc.3.5.822
  9. Yuste-Rojas, M., and Cross, F.R. (2000). Mutations in CDC14 result in high sensitivity to cyclin gene dosage in Saccharomyces cerevisiae. Mol. Gen. Genet. 263 , 60-72. · doi:10.1007/pl00008676

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Metadata

Authors
Chen, K. C., Calzone, L., Csikasz-Nagy, A., Cross, F. R., Novak, B., & Tyson, J. J.
Venue
Molecular Biology of the Cell
Published
2004-08
Volume
15
Issue
8
Pages
3841-3862
ISSN
  • 1059-1524 (ISSN-L)
  • 1939-4586
OpenAlex
W2150750144
Cited by
632
References
102
FWCI
12.79
Type
journal article
Language
en
Open access
green

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CoChat. (2026). Citation check: Integrative Analysis of Cell Cycle Control in Budding Yeast. https://app.cochat.ai/papers/10.1091/mbc.e03-11-0794
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Chen, K. C., Calzone, L., Csikasz-Nagy, A., Cross, F. R., Novak, B., & Tyson, J. J. (2004). Integrative Analysis of Cell Cycle Control in Budding Yeast. Molecular Biology of the Cell. https://doi.org/10.1091/mbc.e03-11-0794

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