Cited by 76SARS-CoV-2 and COVID-19 ResearchCOVID-19 epidemiological studiesVaccine Coverage and Hesitancy

Identifying and Alleviating Bias Due to Differential Depletion of Susceptible People in Postmarketing Evaluations of COVID-19 Vaccines

Open access
Kahn, Rebecca, Schrag, Stephanie J, Verani, Jennifer R, Lipsitch, Marc·2022·American Journal of Epidemiology

Published version of a preprint

Abstract

Recent studies have provided key information about SARS-CoV-2 vaccines’ efficacy and effectiveness (VE). One important question that remains is whether the protection conferred by vaccines wanes over time. However, estimates over time are subject to bias from differential depletion of susceptible individuals between vaccinated and unvaccinated groups. We examined the extent to which biases occur under different scenarios and assessed whether serological testing has the potential to correct this bias. By identifying nonvaccine antibodies, these tests could identify individuals with prior infection. We found that in scenarios with high baseline VE, differential depletion of susceptible individuals created minimal bias in VE estimates, suggesting that any observed declines are likely not due to spurious waning alone. However, if baseline VE was lower, the bias for leaky vaccines (which reduce individual probability of infection given contact) was larger and should be corrected for by excluding individuals with past infection if the mechanism is known to be leaky. Conducting analyses both unadjusted and adjusted for past infection could give lower and upper bounds for the true VE. Studies of VE should therefore enroll individuals regardless of prior infection history but also collect information, ideally through serological testing, on this critical variable.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1093/aje/kwac015

Cites

5 of 5 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 22

  1. [1]1. Lipsitch M, Goldstein E, Ray GT, et al. Depletion-ofsusceptibles bias in influenza vaccine waning studies: how to ensure robust results. Epidemiol Infect. 2019;147:e306.
  2. [2]2. Kahn R, Hitchings M, Wang R, et al. Analyzing vaccine trials in epidemics with mild and asymptomatic infection. Am J Epidemiol. 2019;188(2):467-474.
  3. [3]3. Smith PG, Rodrigues LC, Fine PEM. Assessment of the protective efficacy of vaccines against common diseases using case-control and cohort studies. Int J Epidemiol. 1984; 13(1):87-93.
  4. [4]4. Lewnard JA, Tedijanto C, Cowling BJ, et al. Measurement of vaccine direct effects under the test-negative design. Am J Epidemiol . 2018;187(12):2686-2687.
  5. [5]5. Kahn R, Kennedy-Shaffer L, Grad YH, et al. Potential biases arising from epidemic dynamics in observational seroprotection studies. Am J Epidemiol. 2020;190(2): 328-335.
  6. [6]6. Meyers LA, Pourbohloul B, Newman MEJ, et al. Network theory and SARS: predicting outbreak diversity. J Theor Biol. 2005;232(1):71-81.
  7. [7]7. Chin T, Kahn R, Li R, et al. US-county level variation in intersecting individual, household and community characteristics relevant to COVID-19 and planning an equitable response: a cross-sectional analysis. BMJ Open. 2020;10(9):e039886.
  8. [9]9. Kissler SM, Kishore N, Prabhu M, et al. Reductions in commuting mobility correlate with geographic differences in SARS-CoV-2 prevalence in New York City. Nat Commun. 2020;11(1):4674.
  9. [12]12. seven months with 95% efficacy. EClinicalMedicine. 2021; 35:100861.
  10. [12]12. Cavanaugh AM. Reduced risk of reinfection with SARSCoV-2 after COVID-19 vaccination-Kentucky, May-June 2021. MMWRMorb Mortal Wkly Rep . 2021;70(30): 1081-1083.
  11. [14]14. Sadoff J, Gray G, Vandebosch A, et al. Safety and efficacy of single-dose Ad26.COV2.S vaccine against Covid-19. N Engl J Med. 2021;384(23):2187-2201.
  12. [17]17. Halloran ME, Elizabeth Halloran M, Longini IM, et al. Design and Analysis of Vaccine Studies . New York, NY: Springer; 2010.
  13. [18]18. Thompson MG, Burgess JL, Naleway AL, et al. Interim estimates of vaccine effectiveness of BNT162b2 and mRNA-1273 COVID-19 vaccines in preventing SARS-CoV-2 infection among health care personnel, first responders, and other essential and frontline workers-eight U.S. locations, December 2020-March 2021. MMWRMorb Mortal Wkly Rep. 2021;70(13):495-500.
  14. [22]22. Sullivan SG, Ej TT, Cowling BJ. Theoretical basis of the test-negative study design for assessment of influenza vaccine effectiveness. Am J Epidemiol . 2016;184(5):345-353.
  15. [23]23. Foppa IM, Haber M, Ferdinands JM, et al. The case test-negative design for studies of the effectiveness of influenza vaccine. Vaccine . 2013;31(30):3104-3109.
  16. [25]25. Bergwerk M, Gonen T, Lustig Y, et al. Covid-19 breakthrough infections in vaccinated health care workers. N Engl J Med. 2021;385(16):1474-1484.
  17. [27]27. Thomas SJ, Moreira ED Jr, Kitchin N, et al. Safety and efficacy of the BNT162b2 mRNA Covid-19 vaccine through 6 months. N Engl J Med. 2021;385(19):1761-1773.
  18. [28]28. Goldberg Y, Mandel M, Bar-On YM, et al. Waning immunity after the BNT162b2 vaccine in Israel. N Engl J Med. 2021; 385(24):e85.
  19. [29]29. Kahn R, Hitchings M, Bellan S, et al. Impact of stochastically generated heterogeneity in hazard rates on individually randomized vaccine efficacy trials. Clin Trials. 2018;15(2): 207-211.
  20. [5]5. antibody kinetics and RNA detection during early-phase SARS-CoV-2 infection by time since symptom onset. N Engl J Med. 2020;9:e60122.
  21. [32]32. Buitrago-Garcia D, Egli-Gany D, Counotte MJ, et al. Occurrence and transmission potential of asymptomatic and presymptomatic SARS-CoV-2 infections: a living systematic review and meta-analysis. PLoS Med. 2020; 17(9):e1003346.
  22. [33]33. McAloon C, Collins Á, Hunt K, et al. Incubation period of COVID-19: a rapid systematic review and meta-analysis of observational research. BMJ Open. 2020;10(8):e039652.

Cited by

Sorted by citations

Authors
Kahn, R., Schrag, S. J., Verani, J. R., & Lipsitch, M.
Corresponding author
Kahn, Rebecca
Venue
American Journal of Epidemiology
Published
2022-01-27
Volume
191
Issue
5
Pages
800-811
ISSN
  • 0002-9262 (ISSN-L)
  • 1476-6256
OpenAlex
W4207056100
Cited by
76
References
5
Citations by year
2026: 6 · 2025: 10 · 2024: 17 · 2023: 27 · 2022: 13 · 2021: 3
FWCI
8.18
Type
journal article
Language
en
Open access
Licence
public-domain
Locations
  • American Journal of Epidemiology (publishedVersion, public-domain)
  • medRxiv (acceptedVersion)
  • PubMed Central (publishedVersion)
  • PubMed (publishedVersion)
  • ImmPort
Funders
  • National Institutes of Health
  • National Cancer Institute (U01CA261277)
  • National Institute of General Medical Sciences (R01GM139926)
Topics
  • Health Sciences › Medicine › Infectious Diseases › SARS-CoV-2 and COVID-19 Research
  • Physical Sciences › Mathematics › Modeling and Simulation › COVID-19 epidemiological studies
  • Social Sciences › Health › Vaccine Coverage and Hesitancy
Keywords
COVID-19 vaccines, vaccine effectiveness, waning immunity, bias correction, serological testing, prior SARS-CoV-2 infection, post-marketing surveillance, SARS-CoV-2
MeSH terms
COVID-19, SARS-CoV-2, COVID-19 Vaccines, Disease Susceptibility, Humans, Vaccines, Bias

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review