Functional dissection of HGGT and HPT in barley vitamin E biosynthesis via CRISPR/Cas9-enabled genome editing
Open accessAbstract
Background and Aims: Vitamin E (tocochromanol) is a lipid-soluble antioxidant and an essential nutrient for human health. Among cereal crops, barley (Hordeum vulgare) contains a high level of vitamin E, which includes both tocopherols and tocotrienols. Although the vitamin E biosynthetic pathway has been characterized in dicots, such as Arabidopsis, which only accumulate tocopherols, knowledge regarding vitamin E biosynthesis in monocots is limited because of the lack of functional mutants. This study aimed to obtain gene knockout mutants to elucidate the genetic control of vitamin E composition in barley. Methods: Targeted knockout mutations of HvHPT and HvHGGT in barley were created with CRISPR/Cas9-enabled genome editing. High-performance liquid chromatography (HPLC) was performed to analyse the content of tocochromanol isomers in transgene-free homozygous Hvhpt and Hvhggt mutants. Key Results: Mutagenesis efficiency among T0 regenerated plantlets was 50–65 % as a result of two simultaneously expressed guide RNAs targeting each gene; most of the mutations were stably inherited by the next generation. The transgene-free homozygous mutants of Hvhpt and Hvhggt exhibited decreased grain size and weight, and the HvHGGT mutation led to a shrunken phenotype and significantly lower total starch content in grains. HPLC analysis revealed that targeted mutation of HvHPT significantly reduced the content of both tocopherols and tocotrienols, whereas mutations in HvHGGT completely blocked tocotrienol biosynthesis in barley grains. Transient overexpression of an HvHPT homologue in tobacco leaves significantly increased the production of γ- and δ-tocopherols, which may partly explain why targeted mutation of HvHPT in barley grains did not eliminate tocopherol production. Conclusions: Our results functionally validated that HvHGGT is the only committed gene for the production of tocotrienols, whereas HvHPT is partly responsible for tocopherol biosynthesis in barley.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In barley, CRISPR/Cas9 gene editing has been successfully used to create insertion/deletion (InDel) mutations in eIF4E, HvMPK6, HvNud, HvPAPhy, HvPTST1, HvGBSS1, HvHPT, and HvHGGT genes to improve desirable traits.
“In barley, CRISPR/Cas9 gene editing has been successfully used to create insertion/deletion (InDel) mutations in eukaryotic translation initiation factor 4E (elF4E), H. vulgare mitogen-activated protein kinase 6 (HvMPK6), H. vulgare nudum (HvNud), H. vulgare purple acid phosphatase phytase (HvPAPhy), H. vulgare protein targeting to starch 1 (HvPTST1), H. vulgare granule-bound starch synthase 1 (Hv”
From Genetic resources and precise gene editing for targeted improvement of barley abiotic stress tolerance (2023) · cites this paper as Zeng et al., 2020
Transgene-free homozygous mutants are desirable and in barley are feasible in the T1 generation.
“Transgene-free homozygous mutants are desirable and in barley are feasible in the T1 generation (Zeng et al., 2020).”
From Genetic resources and precise gene editing for targeted improvement of barley abiotic stress tolerance (2023) · cites this paper as Zeng et al., 2020
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system
Xie, K., Minkenberg, B., & Yang, Y. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1420294112 · Cited by 1,532 · see citing works
Self-citationEfficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes
Liang, Z., Chen, K., Li, T., Zhang, Y., Wang, Y., Zhao, Q., Liu, J., Zhang, H., Liu, C., Ran, Y., et al. (2017) · Nature Communications · doi:10.1038/ncomms14261 · Cited by 964 · see citing works
Self-citationZhang, H., Zhang, J., Wei, P., Zhang, B., Gou, F., Feng, Z., Mao, Y., Yang, L., Zhang, H., Xu, N., et al. (2014) · Plant Biotechnology Journal · doi:10.1111/pbi.12200 · Cited by 799 · see citing works
CRISPR-P: A Web Tool for Synthetic Single-Guide RNA Design of CRISPR-System in Plants
Yang, L., Lü, L., Liu, H., Li, S., Feng, X., & Chen, L. (2014) · Molecular Plant · doi:10.1093/mp/ssu044 · Cited by 796 · see citing works
Vitamin E Is Essential for Seed Longevity and for Preventing Lipid Peroxidation during Germination
Sattler, S. E., Gilliland, L. U., Magallanes‐Lundback, M., Pollard, M., & DellaPenna, D. (2004) · The Plant Cell · doi:10.1105/tpc.021360 · Cited by 674 · see citing works
Feng, Z., Mao, Y., Xu, N., Zhang, B., Wei, P., Yang, D., Wang, Z., Zhang, Z., Zheng, R., Yang, L., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1400822111 · Cited by 657 · see citing works
Aggarwal, B. B., Sundaram, C., Prasad, S., & Kannappan, R. (2010) · Biochemical Pharmacology · doi:10.1016/j.bcp.2010.07.043 · Cited by 567 · see citing works
Lawrenson, T., Shorinola, O., Stacey, N., Li, C., Østergaard, L., Patron, N., Uauy, C., & Harwood, W. (2015) · Genome Biology · doi:10.1186/s13059-015-0826-7 · Cited by 551 · see citing works
Chemistry and biology of vitamin E
Schneider, C. G. (2004) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.200400049 · Cited by 542 · see citing works
Vitamin E Protects against Photoinhibition and Photooxidative Stress in Arabidopsis thaliana
Havaux, M., Eymery, F., Porfirova, S., Rey, P., & Dörmann, P. (2005) · The Plant Cell · doi:10.1105/tpc.105.037036 · Cited by 495 · see citing works
Gene replacements and insertions in rice by intron targeting using CRISPR–Cas9
Li, J., Meng, X., Zong, Y., Chen, K., Zhang, H., Li, J., Li, J., & Gao, C. (2016) · Nature Plants · doi:10.1038/nplants.2016.139 · Cited by 431 · see citing works
Cahoon, E. B., Hall, S. E., Ripp, K. G., Ganzke, T. S., Hitz, W. D., & Coughlan, S. (2003) · Nature Biotechnology · doi:10.1038/nbt853 · Cited by 396 · see citing works
Tocochromanol functions in plants: antioxidation and beyond
Falk, J., & Munné‐Bosch, S. (2010) · Journal of Experimental Botany · doi:10.1093/jxb/erq030 · Cited by 355 · see citing works
Tocotrienols in health and disease: The other half of the natural vitamin E family
Sen, C. K., Khanna, S., & Roy, S. (2007) · Molecular Aspects of Medicine · doi:10.1016/j.mam.2007.03.001 · Cited by 351 · see citing works
Phytochemical and Dietary Fiber Components in Barley Varieties in the HEALTHGRAIN Diversity Screen
Andersson, A. A. M., Lampi, A., Nyström, L., Piironen, V. I., Li, L., Ward, J. L., Gebruers, K., Courtin, C. M., Delcour, J. A., Boros, D., et al. (2008) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf802037f · Cited by 262 · see citing works
Regulatory uncertainty over genome editing
Jones, H. D. (2015) · Nature Plants · doi:10.1038/nplants.2014.11 · Cited by 215 · see citing works
Homogentisate Phytyltransferase Activity Is Limiting for Tocopherol Biosynthesis in Arabidopsis
Collakova, E., & DellaPenna, D. (2003) · PLANT PHYSIOLOGY · doi:10.1104/pp.015222 · Cited by 209 · see citing works
Valentin, H. E., Lincoln, K., Moshiri, F., Jensen, P. K., Qi, Q., Venkatesh, T. V., Karunanandaa, B., Baszis, S. R., Norris, S. R., Savidge, B., et al. (2005) · The Plant Cell · doi:10.1105/tpc.105.037077 · Cited by 202 · see citing works
Tocopherol functions in photosynthetic organisms
Maeda, H. A., & DellaPenna, D. (2007) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2007.04.006 · Cited by 188 · see citing works
Savidge, B., Weiss, J. D., Wong, Y.-H. H., Lassner, M., Mitsky, T. A., Shewmaker, C. K., Post‐Beittenmiller, D., & Valentin, H. E. (2002) · PLANT PHYSIOLOGY · doi:10.1104/pp.010747 · Cited by 186 · see citing works
Metabolic compartmentation of plastid prenyllipid biosynthesis
Keller, Y., Bouvier, F., d’Harlingue, A., et al. (1998) · European Journal of Biochemistry · doi:10.1046/j.1432-1327.1998.2510413.x · Cited by 185 · see citing works
Metabolically engineered oilseed crops with enhanced seed tocopherol
Karunanandaa, B., Qi, Q., Hao, M., Baszis, S. R., Jensen, P. K., Wong, Y.-H. H., Jiang, J. W., Venkatramesh, M., Gruys, K. J., Moshiri, F., et al. (2005) · Metabolic Engineering · doi:10.1016/j.ymben.2005.05.005 · Cited by 179 · see citing works
Tocopherol biosynthesis: chemistry, regulation and effects of environmental factors
Lushchak, V. I., & Semchuk, N. M. (2012) · Acta Physiologiae Plantarum · doi:10.1007/s11738-012-0988-9 · Cited by 169 · see citing works
Tocopherols Protect Synechocystis sp. Strain PCC 6803 from Lipid Peroxidation
Maeda, H. A., Sakuragi, Y., Bryant, D. A., & DellaPenna, D. (2005) · PLANT PHYSIOLOGY · doi:10.1104/pp.105.061135 · Cited by 166 · see citing works
A decade of progress in understanding vitamin E synthesis in plants
DellaPenna, D. (2005) · Journal of Plant Physiology · doi:10.1016/j.jplph.2005.04.004 · Cited by 164 · see citing works
QTL editing confers opposing yield performance in different rice varieties
Shen, L., Wang, C., Fu, Y., et al. (2016) · Journal of Integrative Plant Biology · doi:10.1111/jipb.12501 · Cited by 161 · see citing works
Grebenstein, N., & Frank, J. (2012) · Journal of Chromatography A · doi:10.1016/j.chroma.2012.04.042 · Cited by 137 · see citing works
Kapusi, E., Corcuera-Gómez, M., Melnik, S., & Stöger, E. (2017) · Frontiers in Plant Science · doi:10.3389/fpls.2017.00540 · Cited by 132 · see citing works
Yang, W., Cahoon, R. E., Hunter, S. C., Zhang, C., Han, J., Borgschulte, T., & Cahoon, E. B. (2010) · The Plant Journal · doi:10.1111/j.1365-313x.2010.04417.x · Cited by 115 · see citing works
Novel Loci Underlie Natural Variation in Vitamin E Levels in Maize Grain
Diepenbrock, C., Kandianis, C. B., Lipka, A. E., Magallanes‐Lundback, M., Vaillancourt, B., Góngora‐Castillo, E., Wallace, J. G., Cepela, J., Mesberg, A., Bradbury, P. J., et al. (2017) · The Plant Cell · doi:10.1105/tpc.17.00475 · Cited by 115 · see citing works
A Protocol for High-Throughput Agrobacterium-Mediated Barley Transformation
Harwood, W. (2013) · Methods in molecular biology · doi:10.1007/978-1-62703-715-0_20 · Cited by 78 · see citing works
Genetic basis for natural variation in seed vitamin E levels in Arabidopsis thaliana
Gilliland, L. U., Magallanes‐Lundback, M., Hemming, C., et al. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0606221103 · Cited by 75 · see citing works
Horvath, G., Wessjohann, L. A., Bigirimana, J., et al. (2006) · Plant Physiology and Biochemistry · doi:10.1016/j.plaphy.2006.10.010 · Cited by 74 · see citing works
Holme, I. B., Wendt, T., Gil-Humanes, J., Deleuran, L. C., Starker, C. G., Voytas, D. F., & Brinch-Pedersen, H. (2017) · Plant Molecular Biology · doi:10.1007/s11103-017-0640-6 · Cited by 71 · see citing works
Analysis and annotation of the hexaploid oat seed transcriptome
Gutierrez-Gonzalez, J. J., Tu, Z. J., & Garvin, D. F. (2013) · BMC Genomics · doi:10.1186/1471-2164-14-471 · Cited by 69 · see citing works
Wang, H., Xu, S., Fan, Y., Liu, N., Zhan, W., Liu, H., Xiao, Y., Li, K., Pan, Q., Li, W., et al. (2018) · Plant Biotechnology Journal · doi:10.1111/pbi.12889 · Cited by 68 · see citing works
Zhang, C., Zhang, W., Ren, G., Li, D., Cahoon, R. E., Chen, M., Zhou, Y., Yu, B., & Cahoon, E. B. (2015) · PLANT PHYSIOLOGY · doi:10.1104/pp.15.00594 · Cited by 60 · see citing works
Production of novel beneficial alleles of a rice yield‐related QTL by CRISPR/Cas9
Cui, Y., Hu, X., Liang, G., et al. (2020) · Plant Biotechnology Journal · doi:10.1111/pbi.13370 · Cited by 57 · see citing works
Progress of vitamin E metabolic engineering in plants
Chen, S., Li, H., & Liu, G. (2006) · Transgenic Research · doi:10.1007/s11248-006-9012-8 · Cited by 50 · see citing works
Konda, A. R., Nazarenus, T. J., Nguyen, H. T. T., et al. (2019) · Metabolic Engineering · doi:10.1016/j.ymben.2019.10.005 · Cited by 45 · see citing works
Tocotrienol and Its Role in Chronic Diseases
Chin, K., Pang, K.-L., & Soelaiman, I. N. (2016) · Advances in experimental medicine and biology · doi:10.1007/978-3-319-41334-1_5 · Cited by 43 · see citing works
Yang, Q., Zhong, X., Li, Q., Lan, J., Tang, H., Qi, P., Ma, J., Wang, J., Chen, G., Pu, Z., et al. (2019) · Food Chemistry · doi:10.1016/j.foodchem.2019.125892 · Cited by 40 · see citing works
Self-citationGutierrez-Gonzalez, J. J., & Garvin, D. F. (2016) · Plant Biotechnology Journal · doi:10.1111/pbi.12571 · Cited by 29 · see citing works
Kim, Y. H., Lee, Y. Y., Kim, Y. H., et al. (2010) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf104012z · Cited by 21 · see citing works
Overexpression of HvHGGT Enhances Tocotrienol Levels and Antioxidant Activity in Barley
Chen, J., Liu, C., Shi, B., et al. (2017) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.7b00439 · Cited by 21 · see citing works
Self-citationCai, S., Han, Z., Huang, Y., Hu, H., Dai, F., & Zhang, G. (2016) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.5b05441 · Cited by 13 · see citing works
Faulks (2000) · doi:10.1002/(sici)1097-0010(20000515)80:7
Flagged first, then by citations
Research works printed but not linked: 1
- Bramley PM, Elmadfa I, Kafatos A, et al. 2000. Vitamin E. Journal of the Science of Food and Agriculture 80: 913-938.
Cited by
Sorted by citations
Karunarathne, S., Walker, E., Sharma, D., Li, C., & Han, Y. (2023) · Journal of Zhejiang University-SCIENCE B · doi:10.1631/jzus.b2200552 · Cited by 18 · see citing works
“…1 ( HvGBSS1 ), H. vulgare homogentisate phytyltransferase ( HvHPT ), and H. vulgare homogentisate geranylgeranyl trans‐ ferase ( HvHGGT ) genes to improve desirable traits (Holme et al., 2017; Zhong et al., 2019; Zeng et al., 2020; Křenek et al., 2021; Kershanskaya et al., 2022; Zang et al., 2022).”
- Authors
- Zeng, Z., Han, N., Liu, C., Buerte, B., Zhou, C., Chen, J., Wang, M., Zhang, Y., Tang, Y., Zhu, M., Wang, J., Yang, Y., & Bian, H.
- Affiliations
- Zhejiang University (CN)
- Zhejiang University of Technology (CN)
- Tibet Academy of Agricultural and Animal Husbandry Sciences (CN)
- Pennsylvania State University (US)
- Corresponding author
- Bian, Hongwu
- ORCID
- Venue
- Annals of Botany
- Publisher
- Oxford University Press (OUP)
- Published
- 2020-06-24
- Volume
- 126
- Issue
- 5
- Pages
- 929-942
- ISSN
- 0305-7364 (ISSN-L)
- 1095-8290
- PMC
- PMC7539355
- OpenAlex
- W3037109705
- Cited by
- 86
- References
- 47
- Citations by year
- 2026: 10 · 2025: 20 · 2024: 13 · 2023: 19 · 2022: 12 · 2021: 9 · 2020: 3
- FWCI
- 3.57
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model (vor)
- Locations
- Annals of Botany (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Natural Science Foundation of China (31971932, 31771776)
- China Agriculture Research System
- Science Foundation of Zhejiang Province (LGN18C130001)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant biochemistry and biosynthesis
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Genetic and Mutation Studies
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
- Keywords
- barley, vitamin E biosynthesis, tocotrienols, tocopherols, HPT, tocopherol biosynthesis, knockout mutants, CRISPR/Cas9 genome editing, grain starch content, grain size
- MeSH terms
- Gene Editing, Hordeum, Humans, Vitamin E, Tocopherols, Tocotrienols, CRISPR-Cas Systems
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review