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GenABEL: an R library for genome-wide association analysis
Abstract
Here we describe an R library for genome-wide association (GWA) analysis. It implements effective storage and handling of GWA data, fast procedures for genetic data quality control, testing of association of single nucleotide polymorphisms with binary or quantitative traits, visualization of results and also provides easy interfaces to standard statistical and graphical procedures implemented in base R and special R libraries for genetic analysis. We evaluated GenABEL using one simulated and two real data sets. We conclude that GenABEL enables the analysis of GWA data on desktop computers. Availability: http://cran.r-project.org Contact: i.aoultchenko@erasmusmc.nl
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“The genomic inflation factor lambda was computed with the GenABEL 1.8-0 R package63 and a median approach after exclusion of the APOE region (44–46 Mb on chromosome 19 in GRCh38).”
From New insights into the genetic etiology of Alzheimer’s disease and related dementias (2022) · cites this paper as [63]
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Generating samples under a Wright–Fisher neutral model of genetic variation
Hudson, R. R. (2002) · Bioinformatics · doi:10.1093/bioinformatics/18.2.337 · Cited by 2,397
Score Tests for Association between Traits and Haplotypes when Linkage Phase Is Ambiguous
Schaid, D. J., Rowland, C. M., Tines, D. E., Jacobson, R. M., & Poland, G. A. (2002) · The American Journal of Human Genetics · doi:10.1086/338688 · Cited by 1,777
A Note on Exact Tests of Hardy-Weinberg Equilibrium
Wigginton, J. E., Cutler, D. J., & Abecasis, G. R. (2005) · The American Journal of Human Genetics · doi:10.1086/429864 · Cited by 1,492
Genome-wide association: a promising start to a long race
Evans, D. M., & Cardon, L. R. (2006) · Trends in Genetics · doi:10.1016/j.tig.2006.05.001 · Cited by 33
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Girotto, G., Pirastu, N., Sorice, R., Biino, G., Campbell, H., D’Adamo, P., Hastie, N. D., Nutile, T., Polašek, O., Portas, L., et al. (2011) · Journal of Medical Genetics · doi:10.1136/jmg.2010.088310 · Cited by 81
Yin, F., Xing, Y., Zhang, Z., Ai, H., Ouyang, Z., Ouyang, J., Yang, M. J., Li, P., Chen, Y., Gao, J. L., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0062534 · Cited by 82
EVI5 is a risk gene for multiple sclerosis
Hoppenbrouwers, I. A., Aulchenko, Y. S., Ebers, G. C., Ramagopalan, S. V., Oostra, B. A., van Duijn, C. M., & Hintzen, R. Q. (2008) · Genes and Immunity · doi:10.1038/gene.2008.22 · Cited by 81
Self-citationSchnabel, R. B., Kerr, K. F., Lubitz, S. A., Alkylbekova, E. L., Marcus, G. M., Sinner, M. F., Magnani, J. W., Wolf, P. A., Deo, R., Lloyd‐Jones, D. M., et al. (2011) · Circulation Cardiovascular Genetics · doi:10.1161/circgenetics.110.959197 · Cited by 80
Genome Wide Analysis of Fertility and Production Traits in Italian Holstein Cattle
Minozzi, G., Nicolazzi, E. L., Stella, A., Biffani, S., Negrini, R., Lazzari, B., Ajmone‐Marsan, P., & Williams, J. L. (2013) · PLoS ONE · doi:10.1371/journal.pone.0080219 · Cited by 81
Ma, J., Yang, J., Zhou, L., Zhang, Z., Ma, H., Xie, X., Zhang, F., Xiong, X., Cui, L., Yang, H., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0064047 · Cited by 81
Gallois, A., Mefford, J., Ko, A., Vaysse, A., Julienne, H., Ala‐Korpela, M., Laakso, M., Zaitlen, N., Pajukanta, P., & Aschard, H. (2019) · Nature Communications · doi:10.1038/s41467-019-12703-7 · Cited by 78
Replication of celiac disease UK genome-wide association study results in a US population
Garner, C., Murray, J. A., Ding, Y. C., Tien, Z., van Heel, D. A., & Neuhausen, S. L. (2009) · Human Molecular Genetics · doi:10.1093/hmg/ddp364 · Cited by 82
Genome‐wide association study for reproductive traits in a Large White pig population
Wang, Y., Ding, X., Tan, Z., Xing, K., Yang, T., Wang, Y., Sun, D., & Wang, C. (2018) · Animal Genetics · doi:10.1111/age.12638 · Cited by 81
Selection on a Genetic Polymorphism Counteracts Ecological Speciation in a Stick Insect
Comeault, A. A., Flaxman, S. M., Riesch, R., Curran, E. V., Soria‐Carrasco, V., Gompert, Z., Farkas, T. E., Muschick, M., Parchman, T. L., Schwander, T., et al. (2015) · Current Biology · doi:10.1016/j.cub.2015.05.058 · Cited by 81
Hawley, N. L., Minster, R. L., Weeks, D. E., Viali, S., Reupena, M. S., Sun, G., Cheng, H., Deka, R., & McGarvey, S. T. (2014) · American Journal of Human Biology · doi:10.1002/ajhb.22553 · Cited by 80
Henneman, P., Aulchenko, Y. S., Frants, R. R., Zorkoltseva, I. V., Zillikens, M. C., Frölich, M., Oostra, B. A., van Dijk, K. W., & van Duijn, C. M. (2010) · Diabetes Care · doi:10.2337/dc09-1385 · Cited by 80
Self-citationTeh, C.-K., Ong, A. L., Kwong, Q.-B., Apparow, S., Chew, F. T., Mayes, S., Mohamed, M., Appleton, D. R., & Kulaveerasingam, H. (2016) · Scientific Reports · doi:10.1038/srep19075 · Cited by 82
Evolutionary and functional impact of common polymorphic inversions in the human genome
Giner-Delgado, C., Villatoro, S., Lerga-Jaso, J., Gayà‐Vidal, M., Oliva, M., Castellano, D., Pantano, L., Bitarello, B. D., Izquierdo, D., Noguera, I., et al. (2019) · Nature Communications · doi:10.1038/s41467-019-12173-x · Cited by 79
Genome-wide linkage analysis of serum creatinine in three isolated European populations
Pattaro, C., Aulchenko, Y. S., Isaacs, A. J., Vitart, V., Hayward, C., Franklin, C. S., Polašek, O., Kolčić, I., Biloglav, Z., Campbell, S., et al. (2009) · Kidney International · doi:10.1038/ki.2009.135 · Cited by 76
Self-citationFetoni, A. R., Zorzi, V., Paciello, F., Ziraldo, G., Peres, C., Raspa, M., Scavizzi, F., Salvatore, A. M., Crispino, G., Tognola, G., et al. (2018) · Redox Biology · doi:10.1016/j.redox.2018.08.002 · Cited by 82
Wu, P., Farrell, W. E., Haworth, K. E., Emes, R. D., Kitchen, M., Glossop, J. R., Hanna, F. W., & Fryer, A. A. (2016) · Epigenetics · doi:10.1080/15592294.2016.1166321 · Cited by 78
Post-polyploidisation morphotype diversification associates with gene copy number variation
Schießl, S., Hüettel, B., Kuehn, D., Reinhardt, R., & Snowdon, R. J. (2017) · Scientific Reports · doi:10.1038/srep41845 · Cited by 78
Genome-Wide Association Study Reveals Natural Variations Contributing to Drought Resistance in Crops
Wang, H., & Qin, F. (2017) · Frontiers in Plant Science · doi:10.3389/fpls.2017.01110 · Cited by 81
Evolution of invasiveness by genetic accommodation
Bock, D. G., Kantar, M. B., Caseys, C., Matthey‐Doret, R., & Rieseberg, L. H. (2018) · Nature Ecology & Evolution · doi:10.1038/s41559-018-0553-z · Cited by 78
Coleman, J. R. I., Euesden, J., Patel, H., Folarin, A., Newhouse, S., & Breen, G. D. (2015) · Briefings in Functional Genomics · doi:10.1093/bfgp/elv037 · Cited by 85
Tengvall, K., Kierczak, M., Bergvall, K. E., Olsson, M., Frankowiack, M., Farias, F., Pielberg, G., Carlborg, Ö., Leeb, T., Andersson, G., et al. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003475 · Cited by 77
Hill, W. D., Davies, G., van de Lagemaat, L. N., Christoforou, A., Marioni, R. E., Fernandes, C. P. D., Liewald, D. C. M., Croning, M. D. R., Payton, A., Craig, L. C. A., et al. (2014) · Translational Psychiatry · doi:10.1038/tp.2013.114 · Cited by 76
Oladzad, A., Porch, T. G., Rosas, J. C., Moghaddam, S. M., Beaver, J. S., Beebe, S. E., Burridge, J., Jochua, C. N., Miguel, M. A., Miklas, P. N., et al. (2019) · PubMed Central · doi:10.1534/g3.119.400072 · Cited by 77
Han, X., Steven, K., Qassim, A., Marshall, H. N., Bean, C., Tremeer, M., An, J., Siggs, O. M., Gharahkhani, P., Craig, J. E., et al. (2021) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2021.05.005 · Cited by 79
He, M., Cornelis, M. C., Kraft, P. L., van Dam, R. M., Sun, Q., Laurie, C. C., Mirel, D. B., Chasman, D. I., Ridker, P. M., Hunter, D. J., et al. (2010) · Arteriosclerosis Thrombosis and Vascular Biology · doi:10.1161/atvbaha.109.199422 · Cited by 79
Uncovering Networks from Genome-Wide Association Studies via Circular Genomic Permutation
Cabrera, C., Navarro, P., Huffman, J. E., Wright, A. F., Hayward, C., Campbell, H. J., Wilson, J. F., Rudan, I., Hastie, N. D., Vitart, V., et al. (2012) · G3 Genes Genomes Genetics · doi:10.1534/g3.112.002618 · Cited by 77
Genome-Wide Association Study Identifies Genetic Loci Associated with Iron Deficiency
McLaren, C. E., Garner, C. P., Constantine, C. C., McLachlan, S., Vulpe, C. D., Snively, B. M., Gordeuk, V. R., Nickerson, D. A., Cook, J. D., Leiendecker‐Foster, C., et al. (2011) · PLoS ONE · doi:10.1371/journal.pone.0017390 · Cited by 77
Insight in Genome-Wide Association of Metabolite Quantitative Traits by Exome Sequence Analyses
Demirkan, A., Henneman, P., Verhoeven, A., Dharuri, H. K., Amin, N., van Klinken, J. B., Karssen, L. C., de Vries, B., Meissner, A., Göraler, S., et al. (2015) · PLoS Genetics · doi:10.1371/journal.pgen.1004835 · Cited by 77
Heinig, M., Adriaens, M. E., Schäfer, S., van Deutekom, H. W. M., Lodder, E. M., Ware, J. S., Schneider-Lunitz, V., Felkin, L. E., Creemers, E. E., Meder, B., et al. (2017) · Genome biology · doi:10.1186/s13059-017-1286-z · Cited by 74
Krishnan, M., Major, T. J., Topless, R., Dewes, O., Yu, L. H., Thompson, J., McCowan, L. M. E., de Zoysa, J., Stamp, L. K., Dalbeth, N., et al. (2018) · Diabetologia · doi:10.1007/s00125-018-4623-1 · Cited by 75
Qiao, R., Gao, J., Zhang, Z., Li, L., Xie, X., Yin, F., Cui, L., Ma, J., Ai, H., Ren, J., et al. (2015) · Genetics Selection Evolution · doi:10.1186/s12711-015-0089-5 · Cited by 74
Narinç, D., Aksoy, T., Karaman, E., Aygün, A., Fırat, M. Z., & Uslu, M. K. (2013) · Poultry Science · doi:10.3382/ps.2013-03075 · Cited by 74
Molecular quantitative genetics
Jensen, H., Szulkin, M., & Slate, J. (2014) · Oxford University Press eBooks · doi:10.1093/acprof:oso/9780199674237.003.0013 · Cited by 72
Ahsan, M., Ek, W. E., Rask‐Andersen, M., Karlsson, T., Lind-Thomsen, A., Enroth, S., Gyllensten, U., & Johansson, Å. (2017) · PLoS Genetics · doi:10.1371/journal.pgen.1007005 · Cited by 75
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Bettridge, J., Psifidi, A., Terfa, Z., Desta, T. T., Lozano-Jaramillo, M., Dessie, T., Kaiser, P., Wigley, P., Hanotte, O., & Christley, R. (2018) · Nature Sustainability · doi:10.1038/s41893-018-0150-9 · Cited by 77
Copy number variation of CBF-A14 at the Fr-A2 locus determines frost tolerance in winter durum wheat
Sieber, A., Longin, C. F. H., Leiser, W. L., & Würschum, T. (2016) · Theoretical and Applied Genetics · doi:10.1007/s00122-016-2685-3 · Cited by 73
Zhu, B., Niu, H., Zhang, W., Wang, Z., Liang, Y., Guan, L., Guo, P., Chen, Y., Zhang, L., Guo, Y., et al. (2017) · BMC Genomics · doi:10.1186/s12864-017-3847-7 · Cited by 73
Gutiérrez, A. P., Bean, T. P., Hooper, C., Stenton, C. A., Sanders, M., Paley, R. K., Rastas, P. M. A., Bryrom, M., Matika, O., & Houston, R. D. (2018) · G3 Genes Genomes Genetics · doi:10.1534/g3.118.200113 · Cited by 73
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Orlando, G., Law, P., Cornish, A. J., Dobbins, S. E., Chubb, D., Broderick, P., Litchfield, K., Hariri, F., Pastinen, T., Osborne, C. S., et al. (2018) · Nature Genetics · doi:10.1038/s41588-018-0211-z · Cited by 74
Molecular insights into genome-wide association studies of chronic kidney disease-defining traits
Xu, X., Eales, J., Akbarov, A., Guo, H., Becker, L. K., Talavera, D., Ashraf, F., Nawaz, J., Pramanik, S., Bowes, J., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-07260-4 · Cited by 73
Buchwald, J., Chenoweth, M. J., Palviainen, T., Zhu, G., Benner, C., Gordon, S. D., Korhonen, T., Ripatti, S., Madden, P. A. F., Lehtimäki, T. J., et al. (2020) · Molecular Psychiatry · doi:10.1038/s41380-020-0702-z · Cited by 72
Marroni, F., Pfeufer, A., Aulchenko, Y. S., Franklin, C. S., Isaacs, A. J., Pichler, I., Wild, S. H., Oostra, B. A., Wright, A. F., Campbell, H., et al. (2009) · Circulation Cardiovascular Genetics · doi:10.1161/circgenetics.108.833806 · Cited by 72
Self-citationDunn, I., Meddle, S., Wilson, P. W., Wardle, C. A., Law, A. S., Bishop, V. R., Hindar, C., Robertson, G. W., Burt, D. W., Ellison, S. J., et al. (2013) · American Journal of Physiology-Endocrinology and Metabolism · doi:10.1152/ajpendo.00580.2012 · Cited by 72
A Non-Synonymous HMGA2 Variant Decreases Height in Shetland Ponies and Other Small Horses
Frischknecht, M., Jagannathan, V., Plattet, P., Neuditschko, M., Signer‐Hasler, H., Bachmann, I., Pacholewska, A., Drögemüller, C., Dietschi, E., Flury, C., et al. (2015) · PLoS ONE · doi:10.1371/journal.pone.0140749 · Cited by 74
Xia, C., Amador, C., Huffman, J. E., Trochet, H., Campbell, A., Porteous, D. J., Scotland, G., Hastie, N. D., Hayward, C., Vitart, V., et al. (2016) · PLoS Genetics · doi:10.1371/journal.pgen.1005804 · Cited by 69
Pattaro, C., Riegler, P., Stifter, G., Modenese, M., Minelli, C., & Pramstaller, P. P. (2013) · Nephron Clinical Practice · doi:10.1159/000351043 · Cited by 69
Heterogeneity of genetic architecture of body size traits in a free‐living population
Bérénos, C., Ellis, P. A., Pilkington, J. G., Lee, S., Gratten, J., & Pemberton, J. M. (2015) · Molecular Ecology · doi:10.1111/mec.13146 · Cited by 70
Hong, S., Prokopenko, D., Dobričić, V., Kilpert, F., Bos, I., Vos, S. J. B., Tijms, B. M., Andréasson, U., Blennow, K., Vandenberghe, R. R., et al. (2020) · Translational Psychiatry · doi:10.1038/s41398-020-01074-z · Cited by 66
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Annicchiarico, P., Nazzicari, N., Pecetti, L., Romani, M., Ferrari, B., Wei, Y., & Brummer, E. C. (2017) · The Plant Genome · doi:10.3835/plantgenome2016.07.0072 · Cited by 72
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Golka, K., Selinski, S., Lehmann, M., Blaszkewicz, M., Marchan, R., Ickstadt, K., Schwender, H. R., Bolt, H. M., & Hengstler, J. G. (2011) · Archives of Toxicology · doi:10.1007/s00204-011-0676-3 · Cited by 71
Rye, M. S., Warrington, N. M., Scaman, E. S. H., Vijayasekaran, S., Coates, H. L. C., Anderson, D. R., Pennell, C. E., Blackwell, J. M., & Jamieson, S. E. (2012) · PLoS ONE · doi:10.1371/journal.pone.0048215 · Cited by 70
Zare, Y., Shook, G. E., Collins, M. T., & Kirkpatrick, B. W. (2014) · PLoS ONE · doi:10.1371/journal.pone.0088380 · Cited by 70
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Smith, N. L., Huffman, J. E., Strachan, D. P., Huang, J., Dehghan, A., Trompet, S., Lopez, L. M., Shin, S., Baumert, J., Vitart, V., et al. (2011) · Circulation · doi:10.1161/circulationaha.110.009480 · Cited by 69
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Wang, K., Liu, D., Hernández‐Sánchez, J., Chen, J., Liu, C., Wu, Z., Fang, M., & Li, N. (2015) · PLoS ONE · doi:10.1371/journal.pone.0139207 · Cited by 70
Yu, Y., Wang, Q., Zhang, Q., Luo, Z., Wang, Y., Zhang, X., Huang, H., Xiang, J., & Li, F. (2019) · Marine Biotechnology · doi:10.1007/s10126-019-09887-w · Cited by 70
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Benedetti, E., Pučić‐Baković, M., Keser, T., Wahl, A., Hassinen, A., Yang, J., Liu, L., Trbojević‐Akmačić, I., Razdorov, G., Štambuk, J., et al. (2017) · Nature Communications · doi:10.1038/s41467-017-01525-0 · Cited by 68
Takata, A., Nakashima, M., Saitsu, H., Mizuguchi, T., Mitsuhashi, S., Takahashi, Y., Okamoto, N., Osaka, H., Nakamura, K., Tohyama, J., et al. (2019) · Nature Communications · doi:10.1038/s41467-019-10482-9 · Cited by 71
on behalf of the EPIC-CVD Consortium, Staley, J. R., Jones, E., Kaptoge, S., Butterworth, A. S., Sweeting, M. J., Wood, A. M., & Howson, J. M. M. (2017) · European Journal of Human Genetics · doi:10.1038/ejhg.2017.78 · Cited by 58
Forsberg, S. K. G., Andreatta, M. E., Huang, X., Danku, J., Salt, D. E., & Carlborg, Ö. (2015) · PLoS Genetics · doi:10.1371/journal.pgen.1005648 · Cited by 66
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Banos, G., Bramis, G., Bush, S. J., Clark, E. L., McCulloch, M., Smith, J., Schulze, G., Arsenos, G. I., Hume, D. A., & Psifidi, A. (2017) · BMC Genomics · doi:10.1186/s12864-017-3982-1 · Cited by 71
Wang, S., Rohwer, S. A., de Zwaan, D. R., Toews, D. P. L., Lovette, I. J., Mackenzie, J., & Irwin, D. E. (2020) · Evolution Letters · doi:10.1002/evl3.198 · Cited by 68
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Cao, C., Ding, B., Li, Q., Kwok, D., Wu, J., & Long, Q. (2021) · PLoS Genetics · doi:10.1371/journal.pgen.1009405 · Cited by 64
Liu, S., Vallejo, R. L., Palti, Y., Gao, G., Marancik, D. P., Hernández, Á. G., & Wiens, G. D. (2015) · Frontiers in Genetics · doi:10.3389/fgene.2015.00298 · Cited by 68
Pirastu, N., Kooyman, M., Traglia, M., Robino, A., Willems, S. M., Pistis, G., D’Adamo, P., Amin, N., D’Eustacchio, A., Navarini, L., et al. (2014) · PLoS ONE · doi:10.1371/journal.pone.0092065 · Cited by 67
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Minozzi, G., Buggiotti, L., Stella, A., Strozzi, F., Luini, M. V., & Williams, J. L. (2010) · PLoS ONE · doi:10.1371/journal.pone.0011117 · Cited by 68
Single nucleotide polymorphisms for feed efficiency and performance in crossbred beef cattle
Abo-Ismail, M. K., Voort, G. V., Squires, J. J., Swanson, K. C., Mandell, I. B., Liao, X., Stothard, P., Moore, S. S., Plastow, G. S., & Miller, S. P. (2014) · BMC Genetics · doi:10.1186/1471-2156-15-14 · Cited by 68
Zhang, W., Zhang, J., Cui, L., Ma, J., Chen, C., Ai, H., Xie, X., Lin, L., Xiao, S., Huang, L., et al. (2016) · Genetics Selection Evolution · doi:10.1186/s12711-016-0184-2 · Cited by 75
Busch, R. S., Hobbs, B. D., Zhou, J. J., Castaldi, P. J., McGeachie, M. J., Hardin, M. E., Hawryłkiewicz, I., Śliwiński, P., Yim, J., Kim, W. J., et al. (2017) · American Journal of Respiratory Cell and Molecular Biology · doi:10.1165/rcmb.2016-0331oc · Cited by 68
Macciotta, N. P. P., Biffani, S., Bernabucci, U., Lacetera, N., Vitali, A., Ajmone‐Marsan, P., & Nardone, A. (2017) · Journal of Dairy Science · doi:10.3168/jds.2016-12249 · Cited by 68
Evolution of novel mimicry rings facilitated by adaptive introgression in tropical butterflies
Enciso‐Romero, J., Pardo‐Díaz, C., Martin, S. H., Arias, C. F., Linares, M., McMillan, W. O., Jiggins, C. D., & Salazar, C. A. (2017) · Molecular Ecology · doi:10.1111/mec.14277 · Cited by 66
JC Polyomavirus Infection Is Strongly Controlled by Human Leucocyte Antigen Class II Variants
Sundqvist, E., Buck, D., Warnke, C., Albrecht, E., Gieger, C., Khademi, M., Bomfim, I. L., Fogdell‐Hahn, A., Link, J., Alfredsson, L. S., et al. (2014) · PLoS Pathogens · doi:10.1371/journal.ppat.1004084 · Cited by 66
Unlocking new alleles for leaf rust resistance in the Vavilov wheat collection
Riaz, A., Athiyannan, N., Periyannan, S. K., Афанасенко, О. С., Mitrofanova, O. P., Platz, G. J., Aitken, E. A. B., Snowdon, R. J., Lagudah, E. S., Hickey, L. T., et al. (2017) · Theoretical and Applied Genetics · doi:10.1007/s00122-017-2990-5 · Cited by 67
Sobek, S., Crosthwaite, J. C., Lyons, D. B., & Sinclair, B. J. (2011) · Biological Invasions · doi:10.1007/s10530-011-9988-8 · Cited by 67
Sexual homomorphism in dioecious trees: extensive tests fail to detect sexual dimorphism in Populus
McKown, A. D., Klápště, J., Guy, R. D., Soolanayakanahally, R. Y., Mantia, J. L., Porth, I. M., Skyba, O., Unda, F., Douglas, C. J., El-Kassaby, Y. A., et al. (2017) · Scientific Reports · doi:10.1038/s41598-017-01893-z · Cited by 67
Signatures of positive selection in African Butana and Kenana dairy zebu cattle
Bahbahani, H., Salim, B., Almathen, F., Al Enezi, F., Mwacharo, J. M., & Hanotte, O. (2018) · PLOS ONE · doi:10.1371/journal.pone.0190446 · Cited by 67
Precision Phenotyping Reveals Novel Loci for Quantitative Resistance to Septoria Tritici Blotch
Yates, S. A., Mikaberidze, A., Krattinger, S. G., Abrouk, M., Hund, A., Yu, K., Studer, B., Fouché, S., Meile, L., Pereira, D., et al. (2019) · Plant Phenomics · doi:10.34133/2019/3285904 · Cited by 67
Characterisation of genetic regulatory effects for osteoporosis risk variants in human osteoclasts
Mullin, B. H., Tickner, J. C., Zhu, K., Kenny, J., Mullin, S., Brown, S. J., Dudbridge, F., Pavlos, N. J., Mocarski, E. S., Walsh, J. P., et al. (2020) · Genome biology · doi:10.1186/s13059-020-01997-2 · Cited by 66
Sung, Y. J., Schwander, K., Arnett, D. K., Kardia, S. L. R., Rankinen, T., Bouchard, C., Boerwinkle, E., Hunt, S. C., & Rao, D. C. (2014) · Genetic Epidemiology · doi:10.1002/gepi.21800 · Cited by 65
The association between galactosylation of immunoglobulin G and body mass index
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Santure, A. W., Poissant, J., Cauwer, I. D., van Oers, K., Robinson, M. R., Quinn, J. L., Groenen, M. A. M., Visser, M. E., Sheldon, B. C., & Slate, J. (2015) · Molecular Ecology · doi:10.1111/mec.13452 · Cited by 66
Psifidi, A., Banos, G., Matika, O., Desta, T. T., Bettridge, J., Hume, D. A., Dessie, T., Christley, R., Wigley, P., Hanotte, O., et al. (2016) · Genetics Selection Evolution · doi:10.1186/s12711-016-0252-7 · Cited by 66
Rao, D. C., Sung, Y. J., Winkler, T. W., Schwander, K., Borecki, I. B., Cupples, L. A., Gauderman, W. J., Rice, K. M., Munroe, P. B., & Psaty, B. M. (2017) · Circulation Cardiovascular Genetics · doi:10.1161/circgenetics.116.001649 · Cited by 61
Fursdon, J. B., Martin, J. M., Bertram, M. G., Lehtonen, T. K., & Wong, B. B. M. (2018) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2018.09.046 · Cited by 69
Johnston, S. E., Huisman, J., Ellis, P. A., & Pemberton, J. M. (2017) · G3 Genes Genomes Genetics · doi:10.1534/g3.117.044198 · Cited by 67
Rönnegård, L., McFarlane, S. E., Husby, A., Kawakami, T., Ellegren, H., & Qvarnström, A. (2016) · Methods in Ecology and Evolution · doi:10.1111/2041-210x.12535 · Cited by 65
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Aykanat, T., Lindqvist, M., Pritchard, V. L., & Primmer, C. R. (2016) · Journal of Fish Biology · doi:10.1111/jfb.13149 · Cited by 59
Soltani, A., MafiMoghaddam, S., Oladzad, A., Walter, K. A., Kearns, P. J., Vasquez, J. E., Mamidi, S., Lee, R., Shade, A. L., Jacobs, J. L., et al. (2018) · Frontiers in Plant Science · doi:10.3389/fpls.2018.00767 · Cited by 65
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Martı́nez, P., Robledo, D., Taboada, X., Blanco, A., Moser, M., Maroso, F., Hermida, M., Gómez‐Tato, A., Álvarez-Blázquez, B., Cabaleiro, S., et al. (2021) · Genomics · doi:10.1016/j.ygeno.2021.04.007 · Cited by 60
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Mbole-Kariuki, M. N., Sonstegard, T., Orth, A., Thumbi, S. M., Bronsvoort, B. M. D. C., Kiara, H., Toye, P., Conradie, I., Jennings, A., Coetzer, K., et al. (2014) · Heredity · doi:10.1038/hdy.2014.31 · Cited by 69
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Jeong, N., Kim, K.-S., Jeong, S., Kim, J., Park, S.-K., Lee, J. S., Jeong, S., Kang, S., Ha, B., Kim, D.-Y., et al. (2019) · PLoS ONE · doi:10.1371/journal.pone.0224074 · Cited by 63
Metadata
- Authors
- Aulchenko, Y. S., Ripke, S., Isaacs, A., & van Duijn, C. M.
- Affiliations
- Erasmus MC (NL)
- 1 Department of Epidemiology and Biostatistics, Erasmus MC Rotterdam, Postbus 2040, 3000 CA Rotterdam, The Netherlands and 2Statistical Genetics Group, Max-Planck-Institute of Psychiatry, Kraepelinstr. 10, D-80804 Munich, Germany
- Corresponding author
- Aulchenko, Yurii S.
- Venue
- Bioinformatics
- Publisher
- Oxford University Press (OUP)
- Published
- 2007-03-23
- Volume
- 23
- Issue
- 10
- Pages
- 1294-1296
- ISSN
- 1367-4803 (ISSN-L)
- 1367-4811
- OpenAlex
- W2161245845
- Cited by
- 1,836
- References
- 4
- Citations by year
- 2026: 22 · 2025: 39 · 2024: 91 · 2023: 72 · 2022: 65 · 2021: 129 · 2020: 113 · 2019: 161 · 2018: 178 · 2017: 153 · 2016: 139 · 2015: 143 · 2014: 140 · 2013: 116 · 2012: 89
- FWCI
- 19.99
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Bioinformatics (publishedVersion)
- PubMed (publishedVersion)
- EUR Research Repository (Erasmus University Rotterdam) (publishedVersion)
- EUR Research Repository (Erasmus University Rotterdam) (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Mapping and Diversity in Plants and Animals
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
- Keywords
- genome-wide association study, R library, single nucleotide polymorphisms, association testing, binary traits, quantitative traits, statistical software
- MeSH terms
- Computer Simulation, Haplotypes, Humans, Software, Gene Library, Genome, Human, Information Storage and Retrieval, Genome, Computational Biology, Oligonucleotide Array Sequence Analysis, Polymorphism, Single Nucleotide
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