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Ancient autozygous segments subject to positive selection suggest adaptive immune responses in West African cattle

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Long-Term Artificial Selection of Hanwoo (Korean) Cattle Left Genetic Signatures for the Breeding Traits and Has Altered the Genomic Structure

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Ancestral Haplotype Mapping for GWAS and Detection of Signatures of Selection in Admixed Dairy Cattle of Kenya

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Signatures of positive selection for local adaptation of African native cattle populations: A review

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Assessing genetic diversity and defining signatures of positive selection on the genome of dromedary camels from the southeast of the Arabian Peninsula

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Reconstructing the climatic niche breadth of land use for animal production during the African Holocene

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BoLA-DRB3 gene haplotypes show divergence in native Sudanese cattle from taurine and indicine breeds

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Genomic diversity revealed by whole-genome sequencing in three Danish commercial pig breeds

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Whole-Genome Resequencing Reveals Selection Signatures of Abigar Cattle for Local Adaptation

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Genome-wide investigations reveal the population structure and selection signatures of Nigerian cattle adaptation in the sub-Saharan tropics

Mauki, D. H., Tijjani, A., Ma, C., Ng’ang’a, S. I., Mark, A. I., Sanke, O. J., Abdussamad, A. M., Olaogun, S. C., Ibrahim, J., Dawuda, P. M., et al. (2022) · BMC Genomics · doi:10.1186/s12864-022-08512-w · Cited by 18 · see citing works

Functional characterization of Copy Number Variations regions in Djallonké sheep

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Genomic diversity and admixture patterns among six Chinese indigenous cattle breeds in Yunnan

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Identification of genomic regions and candidate genes of functional importance for gastrointestinal parasite resistance traits in Djallonké sheep of Burkina Faso

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Whole Genome Scan Uncovers Candidate Genes Related to Milk Production Traits in Barka Cattle

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Assessing genomic diversity and selective pressures in Bashan cattle by whole-genome sequencing data

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Genetic diversity and selection signatures of the beef ‘Charolais de Cuba’ breed

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The evaluation of genomic diversity and selection signals in the autochthonous Slovak Spotted cattle

Kasarda, R., Moravčí­ková, N., Olšanská, B., Mészáros, G., VOSTRÝ, L., Vostrá-Vydrová, H., Lehocká, K., Prišťák, J., & Candrák, J. (2021) · Czech Journal of Animal Science · doi:10.17221/265/2020-cjas · Cited by 10 · see citing works

Exploration of production conditions: a step towards the development of a community-based breeding program for Butana cattle

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Genomic Reference Resource for African Cattle: Genome Sequences and High-Density Array Variants

Tijjani, A., Kambal, S., Terefe, E., Njeru, R., Ogugo, M., Ndambuki, G., Missohou, A., Traoré, A., Salim, B., Ezeasor, C., et al. (2024) · Scientific Data · doi:10.1038/s41597-024-03589-2 · Cited by 10 · see citing works

Genetic Diversity of Cameroon Cattle and a Putative Genomic Map for Resistance to Bovine Tuberculosis

Callaby, R., Kelly, R., Mazeri, S., Egbe, F. N., Benedictus, L., Clark, E. L., Doeschl-Wilson, A. B., Bronsvoort, M., Salavati, M., & Muwonge, A. (2020) · Frontiers in Genetics · doi:10.3389/fgene.2020.550215 · Cited by 9 · see citing works

Geographical distribution, genetic diversity, and environmental adaptations of dromedary camel breeds in Saudi Arabia

Ibrahim, M. A., Tolone, M., Barbato, M., Alsubaie, F. M., Alrefaei, A. F., & Almutairi, M. H. (2025) · Frontiers in Veterinary Science · doi:10.3389/fvets.2024.1490186 · Cited by 8 · see citing works

Genetic assessment of BoLA-DRB3 polymorphisms by comparing Bangladesh, Ethiopian, and Korean cattle

Mandefro, A., Tessema, T. S., Edea, Z., Uzzaman, M. R., Kim, K., & Dadi, H. (2021) · Journal of Animal Science and Technology · doi:10.5187/jast.2021.e37 · Cited by 8 · see citing works

Genetic characterization of Mozambican Nguni cattle and their relationship with indigenous populations of South Africa

King, F. J. M., Visser, C., & Banga, C. B. (2022) · Livestock Science · doi:10.1016/j.livsci.2022.105044 · Cited by 7 · see citing works

Detection of selection signatures in indigenous African cattle reveals genomic footprints of adaptation, production and temperament traits

Okwasiimire, R., Kugonza, D. R., Gao, J.-X., Weldenegodguad, M., Makgahlela, M., Ghanem, N., Ginja, C., Crooijmans, R., Kantanen, J., Uimari, P., et al. (2026) · Mammalian Genome · doi:10.1007/s00335-026-10193-9 · Cited by 6 · see citing works

Genomic signatures of divergent selection for production and adaptation in domestic goats (Capra hircus)Preprint

Mwacharo, J. M., Kim, E.-S., Elbeltagy, A. R., Aboul-Naga, A. M., Rischkowsky, B., & Rothschild, M. F. (2019) · doi:10.21203/rs.2.15925/v1 · Cited by 6 · see citing works

Genetic Analyses and Genome-Wide Association Studies on Pathogen Resistance of Bos taurus and Bos indicus Cattle Breeds in Cameroon

Abanda, B., Schmid, M., Paguem, A., Iffland, H., Preuß, S., Renz, A., & Eisenbarth, A. (2021) · Genes · doi:10.3390/genes12070976 · Cited by 5 · see citing works

Deciphering the Molecular Mechanism Underlying African Animal Trypanosomiasis by Means of the 1000 Bull Genomes Project Genomic Dataset

Rajavel, A., Klees, S., Hui, Y., Schmitt, A. O., & Gültaş, M. (2022) · Biology · doi:10.3390/biology11050742 · Cited by 5 · see citing works

Genetic resistance to vector-borne hemoprotozoa in livestock: molecular markers, host-parasite interactions, and implications for breeding and control

Salim, B., Alasmari, S., & Bakheit, M. A. (2025) · Journal of Veterinary Science · doi:10.4142/jvs.25125 · Cited by 3 · see citing works

Trypanotolerance Sheko cattle: an option for sustainable control of bovine trypanosomiasis

Robi, D. T., Hurrisa, B. U., & Gelalcha, B. D. (2021) · Open Veterinary Science · doi:10.1515/ovs-2020-0111 · Cited by 3 · see citing works

Genome-wide analysis of goat genetic diversity and production systems in Uganda

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Genomic Analysis of Adaptability and Genetic Structure of Jabal Akhdar Goats: Evidence of Positive Selection in an Indigenous Omani Breed

Mohammad, Z., Bahbahani, H. M., Alfoudari, A., Al‐Kharousi, K., Hamrashdi, A. A. A., Toobi, A. G. A., & Al‐Abri, M. (2025) · Biology · doi:10.3390/biology14070761 · Cited by 2 · see citing works

The History, Geography, and Characteristics of African Zebu, Zebu–Taurine Derivatives, and Well-Established Exotic Cattle Breeds

Rege, J. E. O., Tawah, C. L., Kugonza, D. R., Chagunda, M. G. G., Houaga, I., Opoola, O., & Ibeagha-Awemu, E. M. (2025) · Sustainable development goals series · doi:10.1007/978-3-031-92076-9_4 · Cited by 2 · see citing works

Bovine Genome Database: new curated collection of selective sweeps in bovine populations across the world

Kambal, S., Walsh, A. T., Sivasankaran, S. K., Adossa, N. A., Skarlupka, J. H., Hanotte, O., Suen, G., & Elsik, C. G. (2025) · Nucleic Acids Research · doi:10.1093/nar/gkaf1214 · Cited by 2 · see citing works

Genomic evidence of positive selection highlights functional divergence associated with environmental resilience in central and West African indigenous cattle

Kassa, M., Paguem, A., Abanda, B., Achukwi, D. M., Kingsley, M. T., Preuß, S., Hanotte, O., Senczuk, G., Renz, A., Eisenbarth, A., et al. (2025) · Scientific Reports · doi:10.1038/s41598-025-30767-y · Cited by 2 · see citing works

Genetic Diversity and Selection Signatures in Economically Important Traits of Ethiopian Indigenous Cattle Breed as a Base for Dairy Cattle Genetic Improvement: A Review

Tesfa, A., Alemayehu, K., Mebratie, W., Kerisew, B., & Taye, M. (2024) · Agricultural Reviews · doi:10.18805/ag.rf-281 · Cited by 1 · see citing works

Regiones genómicas, genes y polimorfismos de un solo nucleótido en la resistencia a nematodos gastrointestinales en ovinos. Revisión

Villegas-Castañeda, M., Castañeda-Bustos, V. J., Bello–López, J. M., & Cruz-Cruz, C. (2024) · Revista Mexicana de Ciencias Pecuarias · doi:10.22319/rmcp.v15i3.6441 · Cited by 1 · see citing works

Computational Identification of Milk Trait Regulation Through Transcription Factor Cooperation in Murciano-Granadina Goats

Khan, M. I., Bertram, H., Schmitt, A. O., Ramzan, F., & Gültaş, M. (2024) · Biology · doi:10.3390/biology13110929 · Cited by 1 · see citing works

Surveying Selection Signatures in Murrah Buffalo Using Genome-Wide SNP Data

Jaglan, K., Sukhija, N., Kanaka, K. K., Verma, A., Vohra, V., Alex, R., & George, L. K. (2025) · Cytology and Genetics · doi:10.3103/s0095452725030107 · Cited by 1 · see citing works

Surviving the Heat: Genetic Diversity and Adaptation in Sudanese Butana Cattle

Neumann, G. B., Korkuć, P., Rahmatalla, S. A., Reißmann, M., Omer, E. A. M., Elzaki, S., & Brockmann, G. A. (2025) · Genes · doi:10.3390/genes16121429 · Cited by 1 · see citing works

Novel and known signals of selection for fat deposition in domestic sheep breeds from Africa and EurasiaPreprint

Mastrangelo, S., Bahbahani, H. M., Moioli, B., Ahbara, A., Al‐Abri, M., Almathen, F. S., Silva, A. D., Portolano, B., Mwacharo, J. M., Hanotte, O., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/493940 · Cited by 1 · see citing works

Genome-Wide Local Ancestry and Direct Evidence for Mitonuclear Coadaptation in African Hybrid Cattle Populations ( Bos Taurus/Indicus)Preprint

Ward, J. A., McHugo, G. P., Dover, M. J., Hall, T. J., Ng&apos;ang&apos;a, S. I., Sonstegard, T. S., Bradley, D. G., Frantz, L., Salter‐Townshend, M., & MacHugh, D. E. (2022) · SSRN Electronic Journal · doi:10.2139/ssrn.4055643 · Cited by 1 · see citing works

Deciphering the molecular mechanisms underlying complex traits using bioinformatics and computational biology approaches

Rajavel, A. (2022) · doi:10.53846/goediss-9595

Additional file 2 of Genome-wide investigations reveal the population structure and selection signatures of Nigerian cattle adaptation in the sub-Saharan tropics

Mauki, D. H., Tijjani, A., Ma, C., Ng’ang’a, S. I., Mark, A. I., Sanke, O. J., Abdussamad, A. M., Olaogun, S. C., Ibrahim, J., Dawuda, P. M., et al. (2022) · Figshare · doi:10.6084/m9.figshare.19607800

Incidence and Risk Factors of Toxocara vitulorum Infection in Beef Cattle of Yogyakarta, Indonesia

Ninditya, V. I., Ekawasti, F., Prastowo, J., Widiyono, I., & Nurcahyo, W. (2024) · World s Veterinary Journal · doi:10.54203/scil.2024.wvj67

Prospects for Utilization of Modern Technologies for Cattle Improvement in Africa

PETERS, S. O., Ibeagha-Awemu, E. M., Kwoji, I. D., Mrode, R., Ozoje, M. O., Mbah, D. A., Houaga, I., Okpeku, M., Fayemi, P. O., Trocmé, D., et al. (2025) · Sustainable development goals series · doi:10.1007/978-3-031-92076-9_22

Additional file 1 of Genome-wide investigations reveal the population structure and selection signatures of Nigerian cattle adaptation in the sub-Saharan tropics

Mauki, D. H., Tijjani, A., Ma, C., Ng’ang’a, S. I., Mark, A. I., Sanke, O. J., Abdussamad, A. M., Olaogun, S. C., Ibrahim, J., Dawuda, P. M., et al. (2022) · Figshare · doi:10.6084/m9.figshare.19607797

Additional file 3 of Mitonuclear incompatibility as a hidden driver behind the genome ancestry of African admixed cattle

Kwon, T., Kim, K., Caetano-Anollés, K., Sung, S., Cho, S., Jeong, C., Hanotte, O., & 김희발 (2022) · Figshare · doi:10.6084/m9.figshare.18585750

Signatures of selection underlying adaptation and production performances in tropical Bos indicus cattle: A systematic reviewPreprint

Maharani, D., Sudrajad, P., Bintara, S., Widi, T. S. M., & Worku, M. (2026) · Research Square · doi:10.21203/rs.3.rs-10539299/v1

Unravelling Population Structures and Selection Signatures for milk production and adaptive traits in Genetically Admixed Population of Sub-Saharan African CattlePreprint

Badmus, K. A., Vyas, J., Chitra, A., Kumar, I., Singh, R. K., Mukherjee, S., & Mukherjee, A. (2026) · Research Square · doi:10.21203/rs.3.rs-10489550/v1

Data from: Signatures of positive selection in African Butana and Kenana dairy zebu cattle

Bahbahani, H. M., Salim, B., Almathen, F. S., Al Enzi, F., Mwacharo, J. M., Hanotte, O., & Enezi, F. A. (2017) · Data Archiving and Networked Services (DANS) · doi:10.5061/dryad.s5kp0

Whole-genome resequencing reveals selection signatures associated with milk production traits in African Kenana dairy zebu cattle

Nanaei, H. A., Dehghani-Qanatqestani, M., & Esmailizadeh, A. (2019) · Genomics · doi:10.1016/j.ygeno.2019.06.002 · Cited by 29 · see citing works

Historical demographic profiles and genetic variation of the <scp>E</scp>ast <scp>A</scp>frican <scp>B</scp>utana and <scp>K</scp>enana indigenous dairy zebu cattle

Salim, B., Taha, K. M., Hanotte, O., & Mwacharo, J. M. (2014) · Animal Genetics · doi:10.1111/age.12225 · Cited by 20 · see citing works

Local Ancestry to Identify Selection in Response to Trypanosome Infection in Baoulé x Zebu Crossbred Cattle in Burkina Faso

Yougbaré, B., Ouédraogo, D., Tapsoba, A. S. R., Soudré, A., Zoma, B. L., Orozco‐terWengel, P., Sanou, M., Ouédraogo‐Koné, S., Wurzinger, M., Tamboura, H. H., et al. (2021) · Frontiers in Genetics · doi:10.3389/fgene.2021.670390 · Cited by 22 · see citing works

The Genome Landscape of Indigenous African Cattle

Kim, J., Hanotte, O., Mwai, O. A., Dessie, T., Bashir, S., Diallo, B., Agaba, M., Kim, K., Kwak, W., Sung, S., et al. (2017) · Genome biology · doi:10.1186/s13059-017-1153-y · Cited by 271 · see citing works