PIRD: Pan Immune Repertoire Database

Basic local alignment search tool

Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669

Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab

Riaz, N., Havel, J. J., Makarov, V., Desrichard, A., Urba, W. J., Sims, J. S., Hodi, F. S., Martín-Algarra, S., Mandal, R., Sharfman, W. H., et al. (2017) · Cell · doi:10.1016/j.cell.2017.09.028 · Cited by 2,401

Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing

Zheng, C., Zheng, L., Yoo, J.-K., Guo, H., Zhang, Y., Guo, X., Kang, B., Hu, R., Huang, J. Y., Zhang, Q., et al. (2017) · Cell · doi:10.1016/j.cell.2017.05.035 · Cited by 2,152

MiXCR: software for comprehensive adaptive immunity profiling

Bolotin, D. A., Poslavskii, S., Mitrophanov, I., Shugay, M., Mamedov, I. Z., Putintseva, E. V., & Chudakov, D. M. (2015) · Nature Methods · doi:10.1038/nmeth.3364 · Cited by 1,730

IgBLAST: an immunoglobulin variable domain sequence analysis tool

Ye, J., Ma, N., Madden, T., & Ostell, J. M. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt382 · Cited by 1,161

Comprehensive assessment of T-cell receptor β-chain diversity in αβ T cells

Robins, H. S., Campregher, P. V., Srivastava, S. K., Wacher, A., Turtle, C. J., Kahsai, O., Riddell, S. R., Warren, E. H., & Carlson, C. S. (2009) · Blood · doi:10.1182/blood-2009-04-217604 · Cited by 1,122

Identifying specificity groups in the T cell receptor repertoire

Glanville, J., Huang, H., Nau, A., Hatton, O., Wagar, L. E., Rubelt, F., Ji, X., Han, A., Krams, S. M., Pettus, C., et al. (2017) · Nature · doi:10.1038/nature22976 · Cited by 1,026

Quantifiable predictive features define epitope-specific T cell receptor repertoires

Dash, P., Fiore-Gartland, A. J., Hertz, T., Wang, G., Sharma, S., Souquette, A. H., Crawford, J. C., Clemens, E. B., Nguyen, T. H. O., Kedzierska, K., et al. (2017) · Nature · doi:10.1038/nature22383 · Cited by 904

Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data

Gupta, N. T., Heiden, J. A. V., Uduman, M., Gadala-Maria, D., Yaari, G., & Kleinstein, S. H. (2015) · Bioinformatics · doi:10.1093/bioinformatics/btv359 · Cited by 869

BLAST: improvements for better sequence analysis

Ye, J., McGinnis, S., & Madden, T. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkl164 · Cited by 774

Unveiling cross-reactivity: implications for immune response modulation in cancer

Pretti, M. A. M., Vieira, G. F., Boroni, M., & Bonamino, M. (2024) · Briefings in Bioinformatics · doi:10.1093/bib/bbaf012 · Cited by 3

Distinct Omicron longitudinal memory T cell profile and T cell receptor repertoire associated with COVID-19 hospitalisation

Markey, G., McLaughlin, J., McDaid, D., Lynch, S. M., English, A. R., Alexander, H. D., Kelly, M. G., Bhavsar, M., McGilligan, V., Zhang, S., et al. (2025) · Frontiers in Immunology · doi:10.3389/fimmu.2025.1549570 · Cited by 3

TCR representation learning with protein language models: a comprehensive review

Kinoshita, K., & Kobayashi, T. J. (2025) · International Immunology · doi:10.1093/intimm/dxaf048 · Cited by 3

Weakly supervised peptide-TCR binding prediction facilitates neoantigen identification

Gao, Y., Gao, Y., Wu, S., Li, D., Zhou, C., Meng, F., Dong, K., Zhao, X., Li, P., Liang, A., et al. (2025) · Cell Systems · doi:10.1016/j.cels.2025.101403 · Cited by 7

Identification of Sjögren’s disease–associated T cell receptor motifs through deep sequencing

Jupudi, A. A., Joachims, M. L., Lawrence, C., Lopez-Davis, C., Khatri, B., Rasmussen, A., Grundahl, K., Scofield, R. H., James, J. A., Guthridge, J. M., et al. (2025) · JCI Insight · doi:10.1172/jci.insight.188496 · Cited by 2

AI-driven neoantigen identification: a comprehensive review from somatic variant calling to T cell recognition

Bakhshian, A., Ghorghanlu, S., Atanaki, F. F., Erfani, E., Ashkiyan, A., Etemadi, A., Negahdari, B., Kavousi, K., Kardar, G., & Mazlomi, M. A. (2026) · Journal of Translational Medicine · doi:10.1186/s12967-026-08535-x · Cited by 2

The clinical applications of immunosequencing

Bardwell, B., Bay, J., & Colburn, Z. T. (2024) · Current Research in Translational Medicine · doi:10.1016/j.retram.2024.103439 · Cited by 2

Primary tracheal adenoid cystic carcinoma: A case report and analysis of the tumor immune microenvironment using single cell RNA sequencing

Ye, W., Clark, E. A., Sheng, Q., Colaianni, C. A., Rohde, S. L., & Gelbard, A. H. (2024) · Head & Neck · doi:10.1002/hed.27879 · Cited by 2

Do Domain-Specific Protein Language Models Outperform General Models on Immunology-Related Tasks?Preprint

Deutschmann, N., Pélissier, A., Weber, A., Gao, S., Bogojeska, J., & Martínez, M. R. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.10.17.562795 · Cited by 4

Immunogenomic landscape of T cell repertoire after human lung transplantation and its clinical significancePreprint

Jiao, W., Long, K. D., Young, T., Muntnich, C. B., Rey, A. P., Khwajazadah, M., Wang, J. H., Mohan, V., Rogers, K., Valena, A., et al. (2025) · medRxiv · doi:10.1101/2025.06.03.25328904 · Cited by 2

Immune Stress-induced Tumor Mutation Burden and Neoantigen Expression in 4T1 Mammary Cancer Cells: A Potential Mechanism for Long-term Survival in Patients Treated With Immune Checkpoint Inhibitors

Ishiguro, T., TAKEDA, K., Takayanagi, D., Mura, E., Suzuki, R., Tsurui, T., Iriguchi, N., Hirasawa, Y., Ohkuma, R., Shimokawa, M., et al. (2024) · Cancer Genomics & Proteomics · doi:10.21873/cgp.20481 · Cited by 1

Masked language modeling pretraining dynamics for downstream peptide: T-cell receptor binding prediction

Landry, B., & Zhang, J. (2024) · Bioinformatics Advances · doi:10.1093/bioadv/vbaf028 · Cited by 1

Sequence Feature Representation Based on k-mer Tokenization: A Comparative Study of Methods and the Impact of Data Scale on Model Performance

Yang, R., Cao, J., Wang, Z.-H., & Zhao, W.-M. (2025) · 2025 6th International Conference on Computer Vision, Image and Deep Learning (CVIDL) · doi:10.1109/cvidl65390.2025.11085887 · Cited by 1

AI-driven computational methods and benchmarking for T-cell antigen identification

Deng, Y., Que, J., Xue, G., Cai, Y., Yang, W., Wang, Y., Yi, H., Wang, Z., Lin, Y., Zhou, W., et al. (2026) · Briefings in Bioinformatics · doi:10.1093/bib/bbag123 · Cited by 1

TcrDesign: de novo design of epitope-specific full-length T cell receptors

Diao, K., Chen, J., Zhao, X., Wu, T., Qiu, D., Wang, W., Wang, H., & Liu, X.-S. (2026) · Science China Life Sciences · doi:10.1007/s11427-025-3232-5 · Cited by 2

Immunogenomic landscape of the T cell repertoire after human lung transplantation and its clinical relevance

Jiao, W., Shen, Y., Long, K. D., Young, T., Muntnich, C. B., Rey, A. P., Khwajazadah, M., Wang, J. H., Mohan, V., Rogers, K., et al. (2026) · American Journal of Transplantation · doi:10.1016/j.ajt.2026.06.009 · Cited by 1

Next-gen sequencing-driven antigen screening technology in vaccine development

Dash, A. (2024) · Elsevier eBooks · doi:10.1016/b978-0-443-13395-4.00005-8 · Cited by 1

TTCR: Accurate TCR-Epitope Binding Affinity Prediction Using Transformers

Dai, M., Wu, Y., Zhou, J., Wu, Z., Man, M., Dinh, L. L., Chattoraj, J., Yang, F., Ha, D. M., Liu, Y., et al. (2024) · IEEE Conference on Artificial Intelligence (CAI) · doi:10.1109/cai59869.2024.00263 · Cited by 1

SARS-Cov-2-, HIV-1-, Ebola-neutralizing and anti-PD1 clones are predisposedPreprint

Zhang, Y., Xu, Q., Zeng, H., Wang, M., Zhang, Y., Lan, C., Yang, X., Zhu, Y., Chen, Y., Wang, Q., et al. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.08.13.249086 · Cited by 1

Seven chain adaptive immune receptor repertoire analysis in rheumatoid arthritis: association to disease and clinically relevant phenotypesPreprint

Aterido, A., Lasanta, M. L., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Fernández, S., Sanmartí, R., Fernández‐Nebro, A., et al. (2021) · medRxiv · doi:10.1101/2021.11.26.21266347 · Cited by 1

Context-Aware Amino Acid Embedding Advances Analysis of TCR-Epitope InteractionsPreprint

Zhang, P., Bang, S., Cai, M., & Lee, H. (2023) · eLife · doi:10.7554/elife.88837 · Cited by 1

The T Cell Receptor β Chain Repertoire of Tumor Infiltrating Lymphocytes Improves Neoantigen Prediction and PrioritizationPreprint

Pham, T. M. Q., Nguyễn, T. N., Nguyen, B. Q. T., Tran, T. P. D., Pham, N. M. D., Nguyen, H. T. P., Ho, T. K. C., Nguyen, D. V. L., Nguyen, H. T., Tran, D. H., et al. (2024) · eLife · doi:10.7554/elife.94658.2 · Cited by 1

Candidate HPV-Specific T-Cells Expand in the Tumor Microenvironment During ChemoradiotherapyPreprint

Colbert, L. E., Alam, M. B. E., Lynn, E. J., Edwards, J. K., Karpinets, T. V., Wu, X., Chapman, B. V., Sims, T. T., Lin, D. J., Kouzy, R., et al. (2021) · Research Square · doi:10.21203/rs.3.rs-105933/v1

Multi-tissue architecture of the adaptive immune receptor repertoire in the cynomolgus macaquePreprint

Zhu, Y., Tang, H., Guan, J., Xie, W., Chen, S., Lan, C., Ma, C., Zeng, H., Yang, X., Wang, Q., et al. (2022) · Research Square · doi:10.21203/rs.3.rs-1778626/v1

Seven Chain Adaptive Immune Receptor Repertoire Analysis in Rheumatoid Arthritis: Association to Disease and Clinically Relevant PhenotypesPreprint

Aterido, A., Lasanta, M. L., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Fernández, S., Sanmartí, R., Fernández‐Nebro, A., et al. (2021) · SSRN Electronic Journal · doi:10.2139/ssrn.3992679

Predicting developmental relationships of tumor resident and circulating T cells in ovarian cancerPreprint

Carneiro, M., Barèche, Y., Zhao, C., Thébault, P., Rahimi, K., Provencher, D. M., Samouëlian, V., Cormier, B., Cailhier, J., Mes‐Masson, A., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.02.28.530488

Data from Expansion of Candidate HPV-Specific T Cells in the Tumor Microenvironment during Chemoradiotherapy Is Prognostic in HPV16+ Cancers

Colbert, L. E., El, M. B., Lynn, E. J., Bronk, J., Karpinets, T. V., Wu, X., Chapman, B. V., Sims, T. T., Lin, D., Kouzy, R., et al. (2023) · doi:10.1158/2326-6066.c.6550526

Supplemental Tables from Expansion of Candidate HPV-Specific T Cells in the Tumor Microenvironment during Chemoradiotherapy Is Prognostic in HPV16+ Cancers

Colbert, L. E., El, M. B., Lynn, E. J., Bronk, J., Karpinets, T. V., Wu, X., Chapman, B. V., Sims, T. T., Lin, D., Kouzy, R., et al. (2023) · doi:10.1158/2326-6066.22544087.v1

SiCR: Web application for single-cell repertoire analysis and immune profilingPreprint

Ishikawa, M., Matsumoto, K., & Okuzaki, D. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.08.03.551897

Unified cross-modality integration and analysis of T-cell receptors and T-cell transcriptomesPreprint

Gao, Y., Dong, K., Gao, Y., Jin, X., & Liu, Q. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.08.19.553790

The T cell receptor β chain repertoire of tumor infiltrating lymphocytes improves neoantigen prediction and prioritization

Pham, T. M. Q., Nguyễn, T. N., Nguyen, B. Q. T., Tran, T. P. D., Pham, N. M. D., Nguyen, H. T. P., Ho, T. K. C., Nguyen, D. V. L., Nguyen, H. T., Tran, D. H., et al. (2024) · eLife · doi:10.7554/elife.94658.3

PepTracR: a Centralized Database for Pathogen Peptides and Neoepitopes based on 3D Structures information and Similarity-search in T-cell Immunotherapy Research

Shih, T.-C., Yang, C.-H., Chen, Y.-J., Yeh, L., Lu, C.-W., & Pai, T. (2023) · International Conference on Bioinformatics and Biomedical Science (ICBBS) · doi:10.1145/3647817.3647820

The T Cell Receptor β Chain Repertoire of Tumor Infiltrating Lymphocytes Improves Neoantigen Prediction and PrioritizationPreprint

Pham, T. M. Q., Nguyễn, T. N., Nguyen, B. Q. T., Tran, T. P. D., Pham, N. M. D., Nguyen, H. T. P., Ho, T. K. C., Nguyen, D. V. L., Nguyen, H. T., Tran, D. H., et al. (2024) · eLife · doi:10.7554/elife.94658.1

Analysis of single-cell TCR repertoires and gene expression from multi-modal scRNA-seq data

Plattner, C., Sturm, G., & Rieder, D. (2025) · Methods in cell biology · doi:10.1016/bs.mcb.2025.03.007

BiCNN: A Highly Efficient and Lightweight Model for TCR Affinity Prediction

Yang, R., Cao, J., Yu, Z., Wang, Z., & Zhao, W. (2025) · International Conference on Computer Vision, Image and Deep Learning (CVIDL) · doi:10.1109/cvidl65390.2025.11085611

Restoring data balance via generative models of T cell receptors for antigen-binding predictionPreprint

Loffredo, E., Pastore, M., Cocco, S., & Monasson, R. (2025) · eLife · doi:10.7554/elife.107803.1

Restoring data balance via generative models of T cell receptors for antigen-binding predictionPreprint

Loffredo, E., Pastore, M., Cocco, S., & Monasson, R. (2025) · eLife · doi:10.7554/elife.107803

Machine learning reveals distinct T-cell receptor clusters in plasma cell dyscrasias compared to healthy controls

Coffey, D. G., Zhang, Y., Hill, E., Cross, F., Philip, R., Theoret, M. R., Landgren, O., Baines, A. C., & Kazandjian, D. G. (2025) · PLoS ONE · doi:10.1371/journal.pone.0334053

Insights of Biological Databases

Asim, M. N., Ahmed, S., & Dengel, A. (2025) · Springer eBooks · doi:10.1007/978-3-031-90450-9_4

Additional file 16 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691664

Additional file 19 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691673

Additional file 35 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691721

Additional file 3 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691622

Additional file 9 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691643

Additional file 11 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691649

Additional file 22 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691682

Additional file 17 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691667

Additional file 36 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691724

Additional file 7 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691637

Additional file 34 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691718

Additional file 23 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691685

Additional file 28 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691700

Additional file 33 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691715

Additional file 29 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691703

Additional file 31 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691709

Additional file 6 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691634

Additional file 27 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691697

Additional file 10 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691646

Additional file 18 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691670

Additional file 37 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691727

Additional file 12 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691652

Additional file 5 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691631

Additional file 1 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.25389502

Additional file 2 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.25389926

Additional file 24 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691688

Additional file 14 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691658

Additional file 15 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691661

Additional file 26 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691694

Additional file 13 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691655

Additional file 25 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691691

Additional file 39 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691736

Additional file 4 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., Lasanta, M. L., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691625

Additional file 21 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691679

Additional file 8 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691640

Additional file 20 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691676

Additional file 38 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., Lasanta, M. L., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691733

Additional file 30 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691706

Additional file 32 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., Lasanta, M. L., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Sánchez-Fernández, S. Á., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691712

Additional file 40 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes

Aterido, A., López-Lasanta, M., Blanco, F. J., Juan-Mas, A., García-Vivar, M. L., Erra, A., Pérez-García, C., Fernandez, S. S., Sanmartí, R., Fernández‐Nebro, A., et al. (2024) · Figshare · doi:10.6084/m9.figshare.26691739

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