EpiFactors: a comprehensive database of human epigenetic factors and complexes

Medvedeva, Yulia A., Lennartsson, Andreas, Ehsani, Rezvan, Kulakovskiy, Ivan V., Vorontsov, Ilya E., Panahandeh, Pouda, Khimulya, Grigory, Kasukawa, Takeya +2 more·2015·Database

Cited by (307)

Items 201–300 of 307

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  17. WITHDRAWN: High throughput CRISPR perturbation screens identify epigenetic regulators impacting primordial germ cell development
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  18. Epigene functional diversity: isoform usage, disordered domain content, and variable binding partners
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  20. Comprehensive Analysis of Epigenetic Signatures in Non‐Small Cell Lung Cancer: Development and Validation of an Epigenetics‐Based Prognostic Model for Drug Sensitivity Prediction
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  26. Oxygen Level Modifies the Expression of Genes Involved in the Epigenetic Regulation of Multipotent Stromal Cells In Vitro
    П. И. Бобылева, Yu. V. Rudimova, Ludmila B. Buravkova · 2023 · Bulletin of Experimental Biology and Medicine
  27. Epigenetic target identification strategy based on multi-feature learning
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  30. CpG traffic lights are markers of regulatory regions in humans
    Abdullah M. Khamis, Anna V. Lioznova, Artem V. Artemov, Vasily E. Ramensky, Vladimir B. Bajić, Yulia A. Medvedeva · 2016 · bioRxiv (Cold Spring Harbor Laboratory)
  31. Pre-clinical Strategies to Overcome Drug-Resistant Multiple Myeloma: Predictive Transcriptomics and Targeting the Myeloma Epigenome
    Taylor Harding · 2018 · University of Minnesota Digital Conservancy (University of Minnesota)
  32. Epigenome erosion drives neural crest-like phenotypic mimicry in triple-negative breast cancer and other SOX10+ malignancies
    Jodi M. Saunus, Xavier Marc De Luca, Korinne S. Northwood, Ashwini Raghavendra, Alexander Hasson, Amy E. McCart Reed, Malcolm Lim, Samir Lal, Ana Cristina Vargas, Jamie R. Kutasovic et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
  33. High-resolution transcriptomic and epigenetic profiling identifies novel regulators of COPD phenotypes in human lung fibroblasts
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  34. ASXL1 mutations that cause Bohring Opitz Syndrome (BOS) or acute myeloid leukemia share epigenomic and transcriptomic signatures
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  35. NRF1 Transcriptomic Signatures Contribute to the Pathogenesis of the Most Aggressive Brain Cancer - Glioblastoma
    Kaumudi M. Bhawe · 2021
  36. ENO1 as a biomarker of breast cancer progression and metastasis – a bioinformatic approach
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  38. Characterisation of the hepatocyte response to long-term Listeria monocytogenes infection
    Natalie Descoeudres · 2021
  39. Chromatin and Polycomb: Biology and bioinformatics
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  40. KMT1/Suv39 methyltransferase family regulates peripheral heterochromatin tethering via histone and non-histone protein methylations
    Radhika Arasala Rao, Alhad Ashok Ketkar, Neelam Kedia, Vignesh K Krishnamoorthy, Vairavan Lakshmanan, Pankaj Kumar, Abhishek Mohanty, Shilpa Dilip Kumar, Sufi O Raja, Akash Gulyani et al. · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
  41. Experimental Design and Bioinformatic Analysis of DNA Methylation Data
    Yulia A. Medvedeva, Alex Shershebnev · 2018 · Methods in molecular biology
  42. Epigenetic Patterns/Therapies Associated with Genetic Disorders
    ELIZABETH A. MAZZIO, Karam F. A. Soliman · 2018 · Springer eBooks
  43. A Genome Model Linking Birth Defects to Infections
    Bernard Friedenson · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  44. TINC - a method to dissect transcriptional complexes at single locus resolution - reveals novel Nanog regulators in mouse embryonic stem cells
    Anja S. Knaupp, Monika Mohenska, Michael R. Larcombe, Ethan Ford, SM Lim, Ka Wai Wong, Jinxin Chen, Jaber Firas, Cheng Huang, Xiangqiong Liu et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  45. Activation of the Crtc2/Creb1 transcriptional network in skeletal muscle enhances weight loss during intermittent fasting
    Nelson E. Bruno, Jerome C. Nwachukwu, Sathish Srinivasan, Richard Hawkins, David M. Sturgill, Gordon L. Hager, Stephen Hurst, Shey‐Shing Sheu, Michael D. Conkright, K.W. Nettles · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
  46. CXCR5 gene expression in human lymph node CD8 + T cells is regulated by DNA methylation and nucleosomal occupancy
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  47. Alignment-free method for functional annotation of amino acid substitutions: Application on epigenetic factors involved in hematologic malignancies
    Branislava Gemović, Vladimir Perović, Radoslav S. Davidović, Tamara Drljača, Nevena Veljković · 2021 · PLoS ONE
  48. The Role of CPT1A as a Biomarker of Breast Cancer Progression – a Bioinformatic Analysis
    Vijay S. Sharma, Mitali Das, Athina Giannoudis · 2022 · Research Square
  49. Epigenetic Target Prediction with Accurate Machine Learning Models
    Norberto Sánchez‐Cruz, José L. Medina‐Franco · 2021 · ChemRxiv
  50. Epigenetics in Epidemiology
    Humberto Nicolini, Alma Delia Genis Mendoza, José Jaime Martínez‐Magaña · 2022 · Springer eBooks
  51. Sex and gene regulation in cardiovascular health and disease
    Robin J. G. Hartman · 2022
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    Benpeng Miao, Xiaoyun Xing, Viktoriia Bazylianska, Pamela A. F. Madden, Anna Moszczyńska, Bo Zhang · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
  53. The Role of CPT1A as a Biomarker of Breast Cancer Progression – A Bioinformatic Analysis
    Mitali Das, Athina Giannoudis, Vijay S. Sharma · 2022 · Research Square
  54. Epi-Clock: A sensitive platform to help understand pathogenic disease outbreaks and facilitate the response to future outbreaks of concern.
    Cong Ji, Junbin Shao · 2022 · Research Square
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    Weiran Zhang, Hongming Song, Jing Xia, Yuqi Huan, Xiaowei Wang, Bin Kong · 2022 · Research Square
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    Cong Ji, Junbin Shao · 2022 · Research Square
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  58. Modulating the epigenetic state promotes the reprogramming of transformed cells to pluripotency in a line-specific manner
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  59. Epi-Clock: A sensitive platform to help understand pathogenic disease outbreaks and facilitate the response to future outbreaks of concern.
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  65. A Bioinformatic Characterisation of the Glyolytic Enzyme ENO1 as a Biomarker of Breast Cancer Progression
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  66. Epi-Clock: A Sensitive Platform to Help Understand Pathogenic Disease Outbreaks and Facilitate the Response to Future Outbreaks of Concern
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  79. Additional file 7 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, Jennifer B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
  80. Additional file 1 of Longitudinal analysis of healthy colon establishes aspirin as a suppressor of cancer-related epigenetic aging
    Faiza Noreen, Anna Chaber-Ciopinska, Jarosław Reguła, Primo Schär, Kaspar Truninger · 2020 · Figshare
  81. Additional file 5 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, Jennifer B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
  82. Additional file 1 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, Jennifer B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
  83. Additional file 6 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, Jennifer B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
  84. Additional file 2 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, Jennifer B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
  85. Additional file 1 of Development and validation of epigenetic modification-related signals for the diagnosis and prognosis of colorectal cancer
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  86. Additional file 8 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, Jennifer B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
  87. Additional file 4 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, Jennifer B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
  88. Additional file 1 of p113 isoform encoded by CUX1 circular RNA drives tumor progression via facilitating ZRF1/BRD4 transactivation
    Yang, Feng, Anpei Hu, Guo, Yanhua, Wang, Jianqun, Li, Dan, Wang, Xiaojing, Jin, Shikai, Boling Yuan, Cai, Shuang, Zhou, Yi et al. · 2021 · Figshare
  89. Additional file 3 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, Jennifer B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
  90. Additional file 2 of Development and validation of epigenetic modification-related signals for the diagnosis and prognosis of colorectal cancer
    Li, Xia, Li, Jingjing, Jie Li, Nannan Liu, Zhuang, Liwei · 2024 · Figshare
  91. Additional file 9 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization
    Swanson, G. M., Feiby L. Nassan, James B. Ford, Russ B. Hauser, Jonathan Richard Pilsner, Krawetz, S. A. · 2024 · Figshare
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